Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc188F6WEU2 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc188F6WEU2 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc188F6WEU2 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc188F6WEU2 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc188F6WEU2 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc188F6WEU2 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC17.32■□□□□ 0.36
Ccdc188F6WEU2 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc188F6WEU2 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Ccdc188F6WEU2 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc188F6WEU2 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Ccdc188F6WEU2 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc188F6WEU2 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc188F6WEU2 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Ccdc188F6WEU2 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc188F6WEU2 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc188F6WEU2 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc188F6WEU2 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc188F6WEU2 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Ccdc188F6WEU2 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc188F6WEU2 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc188F6WEU2 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Ccdc188F6WEU2 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc188F6WEU2 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
Ccdc188F6WEU2 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Ccdc188F6WEU2 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc188F6WEU2 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc188F6WEU2 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC17.3■□□□□ 0.36
Ccdc188F6WEU2 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc188F6WEU2 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc188F6WEU2 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc188F6WEU2 Gm13186-201ENSMUST00000118031 316 ntBASIC17.3■□□□□ 0.36
Ccdc188F6WEU2 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc188F6WEU2 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC17.3■□□□□ 0.36
Ccdc188F6WEU2 AA543401-201ENSMUST00000164248 1269 ntBASIC17.3■□□□□ 0.36
Ccdc188F6WEU2 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC17.3■□□□□ 0.36
Ccdc188F6WEU2 Gm7506-201ENSMUST00000207758 815 ntBASIC17.3■□□□□ 0.36
Ccdc188F6WEU2 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc188F6WEU2 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc188F6WEU2 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc188F6WEU2 Gm15500-202ENSMUST00000071641 1019 ntBASIC17.3■□□□□ 0.36
Ccdc188F6WEU2 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Ccdc188F6WEU2 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc188F6WEU2 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc188F6WEU2 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc188F6WEU2 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Ccdc188F6WEU2 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc188F6WEU2 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc188F6WEU2 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ccdc188F6WEU2 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ccdc188F6WEU2 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ccdc188F6WEU2 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ccdc188F6WEU2 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC17.29■□□□□ 0.36
Ccdc188F6WEU2 Gm25745-201ENSMUST00000174945 133 ntBASIC17.29■□□□□ 0.36
Ccdc188F6WEU2 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC17.29■□□□□ 0.36
Ccdc188F6WEU2 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ccdc188F6WEU2 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ccdc188F6WEU2 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ccdc188F6WEU2 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ccdc188F6WEU2 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ccdc188F6WEU2 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc188F6WEU2 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc188F6WEU2 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc188F6WEU2 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc188F6WEU2 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC17.28■□□□□ 0.36
Ccdc188F6WEU2 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc188F6WEU2 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC17.28■□□□□ 0.36
Ccdc188F6WEU2 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC17.28■□□□□ 0.36
Ccdc188F6WEU2 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc188F6WEU2 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc188F6WEU2 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc188F6WEU2 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc188F6WEU2 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc188F6WEU2 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc188F6WEU2 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc188F6WEU2 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ccdc188F6WEU2 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Ccdc188F6WEU2 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ccdc188F6WEU2 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Ccdc188F6WEU2 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ccdc188F6WEU2 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ccdc188F6WEU2 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Ccdc188F6WEU2 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
Ccdc188F6WEU2 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC17.27■□□□□ 0.36
Ccdc188F6WEU2 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ccdc188F6WEU2 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Ccdc188F6WEU2 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ccdc188F6WEU2 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
Ccdc188F6WEU2 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ccdc188F6WEU2 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ccdc188F6WEU2 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc188F6WEU2 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc188F6WEU2 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc188F6WEU2 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc188F6WEU2 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc188F6WEU2 Gm13616-201ENSMUST00000120600 222 ntBASIC17.26■□□□□ 0.35
Ccdc188F6WEU2 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Ccdc188F6WEU2 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc188F6WEU2 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC17.26■□□□□ 0.35
Ccdc188F6WEU2 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms