Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC20.14■□□□□ 0.81
Pcdhb9E9Q5G2 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdhb9E9Q5G2 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Pcdhb9E9Q5G2 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdhb9E9Q5G2 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdhb9E9Q5G2 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC20.14■□□□□ 0.81
Pcdhb9E9Q5G2 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdhb9E9Q5G2 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC20.13■□□□□ 0.81
Pcdhb9E9Q5G2 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC20.13■□□□□ 0.81
Pcdhb9E9Q5G2 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdhb9E9Q5G2 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdhb9E9Q5G2 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdhb9E9Q5G2 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdhb9E9Q5G2 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdhb9E9Q5G2 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC20.13■□□□□ 0.81
Pcdhb9E9Q5G2 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdhb9E9Q5G2 Gm21559-201ENSMUST00000220638 855 ntBASIC20.13■□□□□ 0.81
Pcdhb9E9Q5G2 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdhb9E9Q5G2 Gm8587-201ENSMUST00000076538 843 ntBASIC20.13■□□□□ 0.81
Pcdhb9E9Q5G2 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC20.13■□□□□ 0.81
Pcdhb9E9Q5G2 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC20.13■□□□□ 0.81
Pcdhb9E9Q5G2 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdhb9E9Q5G2 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdhb9E9Q5G2 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
Pcdhb9E9Q5G2 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdhb9E9Q5G2 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdhb9E9Q5G2 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdhb9E9Q5G2 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdhb9E9Q5G2 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdhb9E9Q5G2 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC20.12■□□□□ 0.81
Pcdhb9E9Q5G2 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdhb9E9Q5G2 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC20.12■□□□□ 0.81
Pcdhb9E9Q5G2 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdhb9E9Q5G2 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdhb9E9Q5G2 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdhb9E9Q5G2 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdhb9E9Q5G2 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdhb9E9Q5G2 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC20.11■□□□□ 0.81
Pcdhb9E9Q5G2 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC20.11■□□□□ 0.81
Pcdhb9E9Q5G2 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Pcdhb9E9Q5G2 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdhb9E9Q5G2 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdhb9E9Q5G2 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdhb9E9Q5G2 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Pcdhb9E9Q5G2 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdhb9E9Q5G2 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Pcdhb9E9Q5G2 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
Pcdhb9E9Q5G2 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdhb9E9Q5G2 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
Pcdhb9E9Q5G2 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdhb9E9Q5G2 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdhb9E9Q5G2 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdhb9E9Q5G2 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Pcdhb9E9Q5G2 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Pcdhb9E9Q5G2 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Pcdhb9E9Q5G2 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdhb9E9Q5G2 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC20.09■□□□□ 0.81
Pcdhb9E9Q5G2 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdhb9E9Q5G2 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdhb9E9Q5G2 Gm26039-201ENSMUST00000158152 144 ntBASIC20.09■□□□□ 0.81
Pcdhb9E9Q5G2 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
Pcdhb9E9Q5G2 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC20.09■□□□□ 0.81
Pcdhb9E9Q5G2 Gm27389-201ENSMUST00000183622 195 ntBASIC20.09■□□□□ 0.81
Pcdhb9E9Q5G2 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdhb9E9Q5G2 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdhb9E9Q5G2 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdhb9E9Q5G2 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdhb9E9Q5G2 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC20.09■□□□□ 0.81
Pcdhb9E9Q5G2 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdhb9E9Q5G2 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdhb9E9Q5G2 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdhb9E9Q5G2 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdhb9E9Q5G2 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pcdhb9E9Q5G2 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pcdhb9E9Q5G2 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Pcdhb9E9Q5G2 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pcdhb9E9Q5G2 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Pcdhb9E9Q5G2 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC20.08■□□□□ 0.81
Pcdhb9E9Q5G2 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pcdhb9E9Q5G2 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Pcdhb9E9Q5G2 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pcdhb9E9Q5G2 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Pcdhb9E9Q5G2 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Pcdhb9E9Q5G2 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Pcdhb9E9Q5G2 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Pcdhb9E9Q5G2 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
Pcdhb9E9Q5G2 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
Pcdhb9E9Q5G2 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC20.07■□□□□ 0.8
Pcdhb9E9Q5G2 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdhb9E9Q5G2 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdhb9E9Q5G2 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdhb9E9Q5G2 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Pcdhb9E9Q5G2 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdhb9E9Q5G2 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdhb9E9Q5G2 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
Pcdhb9E9Q5G2 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdhb9E9Q5G2 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdhb9E9Q5G2 Gm23634-201ENSMUST00000175071 91 ntBASIC20.07■□□□□ 0.8
Pcdhb9E9Q5G2 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdhb9E9Q5G2 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms