Protein–RNA interactions for Protein: D3YU81

Rfx8, DNA-binding protein RFX8, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx8D3YU81 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Rfx8D3YU81 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Rfx8D3YU81 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rfx8D3YU81 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rfx8D3YU81 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rfx8D3YU81 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Rfx8D3YU81 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Rfx8D3YU81 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC18.13■□□□□ 0.49
Rfx8D3YU81 Gm3375-201ENSMUST00000203929 796 ntBASIC18.13■□□□□ 0.49
Rfx8D3YU81 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC18.13■□□□□ 0.49
Rfx8D3YU81 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC18.13■□□□□ 0.49
Rfx8D3YU81 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rfx8D3YU81 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rfx8D3YU81 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rfx8D3YU81 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC18.13■□□□□ 0.49
Rfx8D3YU81 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rfx8D3YU81 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC18.12■□□□□ 0.49
Rfx8D3YU81 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rfx8D3YU81 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Rfx8D3YU81 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rfx8D3YU81 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC18.12■□□□□ 0.49
Rfx8D3YU81 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Rfx8D3YU81 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Rfx8D3YU81 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Rfx8D3YU81 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Rfx8D3YU81 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Rfx8D3YU81 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC18.12■□□□□ 0.49
Rfx8D3YU81 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rfx8D3YU81 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Rfx8D3YU81 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rfx8D3YU81 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rfx8D3YU81 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rfx8D3YU81 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rfx8D3YU81 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rfx8D3YU81 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Rfx8D3YU81 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Rfx8D3YU81 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
Rfx8D3YU81 Gm37055-201ENSMUST00000191866 133 ntBASIC18.11■□□□□ 0.49
Rfx8D3YU81 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rfx8D3YU81 Otx2os1-204ENSMUST00000227221 751 ntBASIC18.11■□□□□ 0.49
Rfx8D3YU81 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rfx8D3YU81 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Rfx8D3YU81 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Rfx8D3YU81 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rfx8D3YU81 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rfx8D3YU81 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rfx8D3YU81 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
Rfx8D3YU81 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rfx8D3YU81 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rfx8D3YU81 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rfx8D3YU81 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rfx8D3YU81 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Rfx8D3YU81 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rfx8D3YU81 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rfx8D3YU81 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
Rfx8D3YU81 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rfx8D3YU81 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rfx8D3YU81 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rfx8D3YU81 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rfx8D3YU81 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Rfx8D3YU81 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rfx8D3YU81 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rfx8D3YU81 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Rfx8D3YU81 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rfx8D3YU81 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rfx8D3YU81 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Rfx8D3YU81 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Rfx8D3YU81 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Rfx8D3YU81 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC18.1■□□□□ 0.49
Rfx8D3YU81 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Rfx8D3YU81 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rfx8D3YU81 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rfx8D3YU81 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rfx8D3YU81 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rfx8D3YU81 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rfx8D3YU81 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rfx8D3YU81 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rfx8D3YU81 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rfx8D3YU81 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Rfx8D3YU81 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rfx8D3YU81 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Rfx8D3YU81 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC18.09■□□□□ 0.49
Rfx8D3YU81 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rfx8D3YU81 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rfx8D3YU81 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC18.09■□□□□ 0.49
Rfx8D3YU81 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC18.09■□□□□ 0.49
Rfx8D3YU81 AL672049.1-201ENSMUST00000197943 91 ntBASIC18.09■□□□□ 0.49
Rfx8D3YU81 Gm10252-201ENSMUST00000209541 832 ntBASIC18.09■□□□□ 0.49
Rfx8D3YU81 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC18.09■□□□□ 0.49
Rfx8D3YU81 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Rfx8D3YU81 AC125311.2-201ENSMUST00000227477 1940 ntBASIC18.09■□□□□ 0.49
Rfx8D3YU81 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC18.09■□□□□ 0.49
Rfx8D3YU81 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC18.09■□□□□ 0.49
Rfx8D3YU81 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rfx8D3YU81 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Rfx8D3YU81 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Rfx8D3YU81 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Rfx8D3YU81 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Rfx8D3YU81 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Rfx8D3YU81 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms