Protein–RNA interactions for Protein: A6X942

Sh2d4b, SH2 domain-containing protein 4B, mousemouse

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d4bA6X942 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sh2d4bA6X942 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Sh2d4bA6X942 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Sh2d4bA6X942 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sh2d4bA6X942 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sh2d4bA6X942 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Sh2d4bA6X942 Gm13474-201ENSMUST00000122466 815 ntBASIC18.31■□□□□ 0.52
Sh2d4bA6X942 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sh2d4bA6X942 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sh2d4bA6X942 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC18.31■□□□□ 0.52
Sh2d4bA6X942 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sh2d4bA6X942 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Sh2d4bA6X942 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Sh2d4bA6X942 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sh2d4bA6X942 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sh2d4bA6X942 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC18.31■□□□□ 0.52
Sh2d4bA6X942 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sh2d4bA6X942 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sh2d4bA6X942 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sh2d4bA6X942 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Sh2d4bA6X942 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sh2d4bA6X942 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC18.3■□□□□ 0.52
Sh2d4bA6X942 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC18.3■□□□□ 0.52
Sh2d4bA6X942 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Sh2d4bA6X942 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sh2d4bA6X942 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sh2d4bA6X942 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sh2d4bA6X942 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sh2d4bA6X942 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sh2d4bA6X942 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sh2d4bA6X942 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sh2d4bA6X942 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sh2d4bA6X942 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sh2d4bA6X942 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sh2d4bA6X942 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Sh2d4bA6X942 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Sh2d4bA6X942 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sh2d4bA6X942 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sh2d4bA6X942 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sh2d4bA6X942 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
Sh2d4bA6X942 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC18.29■□□□□ 0.52
Sh2d4bA6X942 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sh2d4bA6X942 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC18.29■□□□□ 0.52
Sh2d4bA6X942 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC18.29■□□□□ 0.52
Sh2d4bA6X942 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC18.29■□□□□ 0.52
Sh2d4bA6X942 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sh2d4bA6X942 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sh2d4bA6X942 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sh2d4bA6X942 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Sh2d4bA6X942 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sh2d4bA6X942 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sh2d4bA6X942 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sh2d4bA6X942 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sh2d4bA6X942 Dmtn-207ENSMUST00000228001 2437 ntBASIC18.29■□□□□ 0.52
Sh2d4bA6X942 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC18.29■□□□□ 0.52
Sh2d4bA6X942 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Sh2d4bA6X942 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sh2d4bA6X942 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC18.29■□□□□ 0.52
Sh2d4bA6X942 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Sh2d4bA6X942 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sh2d4bA6X942 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sh2d4bA6X942 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sh2d4bA6X942 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sh2d4bA6X942 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sh2d4bA6X942 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC18.28■□□□□ 0.52
Sh2d4bA6X942 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sh2d4bA6X942 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Sh2d4bA6X942 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sh2d4bA6X942 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Sh2d4bA6X942 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sh2d4bA6X942 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sh2d4bA6X942 Gm7153-201ENSMUST00000117092 455 ntBASIC18.28■□□□□ 0.52
Sh2d4bA6X942 Gm27389-201ENSMUST00000183622 195 ntBASIC18.28■□□□□ 0.52
Sh2d4bA6X942 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC18.28■□□□□ 0.52
Sh2d4bA6X942 Gm5587-201ENSMUST00000206270 674 ntBASIC18.28■□□□□ 0.52
Sh2d4bA6X942 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sh2d4bA6X942 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Sh2d4bA6X942 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sh2d4bA6X942 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Sh2d4bA6X942 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sh2d4bA6X942 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sh2d4bA6X942 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Sh2d4bA6X942 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sh2d4bA6X942 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sh2d4bA6X942 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sh2d4bA6X942 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Sh2d4bA6X942 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sh2d4bA6X942 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC18.28■□□□□ 0.52
Sh2d4bA6X942 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Sh2d4bA6X942 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sh2d4bA6X942 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sh2d4bA6X942 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Sh2d4bA6X942 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC18.27■□□□□ 0.52
Sh2d4bA6X942 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Sh2d4bA6X942 Gm28033-201ENSMUST00000184224 96 ntBASIC18.27■□□□□ 0.52
Sh2d4bA6X942 Gm17807-201ENSMUST00000186869 298 ntBASIC18.27■□□□□ 0.52
Sh2d4bA6X942 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Sh2d4bA6X942 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC18.27■□□□□ 0.52
Sh2d4bA6X942 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Sh2d4bA6X942 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC18.27■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms