Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Scn1aA2APX8 Cxcl14-202ENSMUST00000224801 1467 ntBASIC17.95■□□□□ 0.46
Scn1aA2APX8 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Scn1aA2APX8 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Scn1aA2APX8 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Scn1aA2APX8 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Scn1aA2APX8 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Scn1aA2APX8 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Scn1aA2APX8 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Scn1aA2APX8 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC17.94■□□□□ 0.46
Scn1aA2APX8 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Scn1aA2APX8 Gm27389-201ENSMUST00000183622 195 ntBASIC17.94■□□□□ 0.46
Scn1aA2APX8 Gm18421-201ENSMUST00000204122 625 ntBASIC17.94■□□□□ 0.46
Scn1aA2APX8 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Scn1aA2APX8 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC17.94■□□□□ 0.46
Scn1aA2APX8 Gm7367-201ENSMUST00000057611 492 ntBASIC17.94■□□□□ 0.46
Scn1aA2APX8 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
Scn1aA2APX8 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Scn1aA2APX8 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Scn1aA2APX8 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Scn1aA2APX8 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Scn1aA2APX8 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Scn1aA2APX8 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Scn1aA2APX8 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Scn1aA2APX8 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Scn1aA2APX8 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Scn1aA2APX8 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Scn1aA2APX8 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Scn1aA2APX8 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Scn1aA2APX8 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Scn1aA2APX8 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Scn1aA2APX8 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Scn1aA2APX8 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Scn1aA2APX8 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Scn1aA2APX8 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Scn1aA2APX8 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Scn1aA2APX8 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Scn1aA2APX8 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Scn1aA2APX8 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Scn1aA2APX8 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Scn1aA2APX8 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Scn1aA2APX8 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Scn1aA2APX8 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Scn1aA2APX8 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Scn1aA2APX8 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Scn1aA2APX8 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC17.93■□□□□ 0.46
Scn1aA2APX8 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Scn1aA2APX8 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Scn1aA2APX8 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Scn1aA2APX8 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Scn1aA2APX8 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Scn1aA2APX8 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC17.92■□□□□ 0.46
Scn1aA2APX8 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Scn1aA2APX8 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Scn1aA2APX8 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Scn1aA2APX8 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Scn1aA2APX8 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Scn1aA2APX8 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Scn1aA2APX8 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Scn1aA2APX8 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Scn1aA2APX8 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Scn1aA2APX8 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC17.91■□□□□ 0.46
Scn1aA2APX8 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Scn1aA2APX8 Gm26039-201ENSMUST00000158152 144 ntBASIC17.91■□□□□ 0.46
Scn1aA2APX8 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
Scn1aA2APX8 Gm33142-201ENSMUST00000193913 867 ntBASIC17.91■□□□□ 0.46
Scn1aA2APX8 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Scn1aA2APX8 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Scn1aA2APX8 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Scn1aA2APX8 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Scn1aA2APX8 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC17.91■□□□□ 0.46
Scn1aA2APX8 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Scn1aA2APX8 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Scn1aA2APX8 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Scn1aA2APX8 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Scn1aA2APX8 Gm11355-201ENSMUST00000121120 306 ntBASIC17.91■□□□□ 0.46
Scn1aA2APX8 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Scn1aA2APX8 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Scn1aA2APX8 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Scn1aA2APX8 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Scn1aA2APX8 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Scn1aA2APX8 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Scn1aA2APX8 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Scn1aA2APX8 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Scn1aA2APX8 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Scn1aA2APX8 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Scn1aA2APX8 Gm13186-201ENSMUST00000118031 316 ntBASIC17.9■□□□□ 0.46
Scn1aA2APX8 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC17.9■□□□□ 0.46
Scn1aA2APX8 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC17.9■□□□□ 0.46
Scn1aA2APX8 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Scn1aA2APX8 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Scn1aA2APX8 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Scn1aA2APX8 Gm10819-201ENSMUST00000099988 561 ntBASIC17.9■□□□□ 0.46
Scn1aA2APX8 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Scn1aA2APX8 Gm11620-201ENSMUST00000118770 1845 ntBASIC17.9■□□□□ 0.46
Scn1aA2APX8 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Scn1aA2APX8 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Scn1aA2APX8 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Scn1aA2APX8 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.9■□□□□ 0.46
Scn1aA2APX8 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 14.2 ms