Protein–RNA interactions for Protein: A0A140LI48

Pcdhgb8, Protocadherin gamma subfamily B, 8, mousemouse

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb8A0A140LI48 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhgb8A0A140LI48 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhgb8A0A140LI48 Gm11249-201ENSMUST00000117071 859 ntBASIC15.47■□□□□ 0.07
Pcdhgb8A0A140LI48 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhgb8A0A140LI48 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhgb8A0A140LI48 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC15.47■□□□□ 0.07
Pcdhgb8A0A140LI48 Wnt10b-205ENSMUST00000226846 1204 ntBASIC15.47■□□□□ 0.07
Pcdhgb8A0A140LI48 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhgb8A0A140LI48 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhgb8A0A140LI48 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC15.47■□□□□ 0.07
Pcdhgb8A0A140LI48 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhgb8A0A140LI48 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC15.47■□□□□ 0.07
Pcdhgb8A0A140LI48 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC15.47■□□□□ 0.07
Pcdhgb8A0A140LI48 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC15.47■□□□□ 0.07
Pcdhgb8A0A140LI48 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhgb8A0A140LI48 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhgb8A0A140LI48 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhgb8A0A140LI48 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhgb8A0A140LI48 Gm26917-202ENSMUST00000192833 3329 ntBASIC15.46■□□□□ 0.07
Pcdhgb8A0A140LI48 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhgb8A0A140LI48 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhgb8A0A140LI48 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhgb8A0A140LI48 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhgb8A0A140LI48 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhgb8A0A140LI48 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Pcdhgb8A0A140LI48 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhgb8A0A140LI48 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhgb8A0A140LI48 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Pcdhgb8A0A140LI48 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC15.46■□□□□ 0.07
Pcdhgb8A0A140LI48 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhgb8A0A140LI48 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhgb8A0A140LI48 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC15.46■□□□□ 0.07
Pcdhgb8A0A140LI48 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhgb8A0A140LI48 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC15.46■□□□□ 0.07
Pcdhgb8A0A140LI48 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC15.46■□□□□ 0.07
Pcdhgb8A0A140LI48 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhgb8A0A140LI48 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhgb8A0A140LI48 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhgb8A0A140LI48 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhgb8A0A140LI48 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhgb8A0A140LI48 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC15.46■□□□□ 0.07
Pcdhgb8A0A140LI48 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhgb8A0A140LI48 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhgb8A0A140LI48 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhgb8A0A140LI48 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Pcdhgb8A0A140LI48 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.06
Pcdhgb8A0A140LI48 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
Pcdhgb8A0A140LI48 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC15.45■□□□□ 0.06
Pcdhgb8A0A140LI48 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhgb8A0A140LI48 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhgb8A0A140LI48 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhgb8A0A140LI48 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhgb8A0A140LI48 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhgb8A0A140LI48 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhgb8A0A140LI48 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhgb8A0A140LI48 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhgb8A0A140LI48 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC15.45■□□□□ 0.06
Pcdhgb8A0A140LI48 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhgb8A0A140LI48 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhgb8A0A140LI48 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC15.45■□□□□ 0.06
Pcdhgb8A0A140LI48 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC15.45■□□□□ 0.06
Pcdhgb8A0A140LI48 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC15.45■□□□□ 0.06
Pcdhgb8A0A140LI48 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhgb8A0A140LI48 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhgb8A0A140LI48 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhgb8A0A140LI48 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhgb8A0A140LI48 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhgb8A0A140LI48 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhgb8A0A140LI48 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhgb8A0A140LI48 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhgb8A0A140LI48 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhgb8A0A140LI48 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhgb8A0A140LI48 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Pcdhgb8A0A140LI48 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Pcdhgb8A0A140LI48 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhgb8A0A140LI48 Gm13158-201ENSMUST00000122007 736 ntBASIC15.44■□□□□ 0.06
Pcdhgb8A0A140LI48 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC15.44■□□□□ 0.06
Pcdhgb8A0A140LI48 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
Pcdhgb8A0A140LI48 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhgb8A0A140LI48 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhgb8A0A140LI48 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhgb8A0A140LI48 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhgb8A0A140LI48 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhgb8A0A140LI48 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhgb8A0A140LI48 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhgb8A0A140LI48 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhgb8A0A140LI48 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhgb8A0A140LI48 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhgb8A0A140LI48 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC15.44■□□□□ 0.06
Pcdhgb8A0A140LI48 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhgb8A0A140LI48 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC15.44■□□□□ 0.06
Pcdhgb8A0A140LI48 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhgb8A0A140LI48 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhgb8A0A140LI48 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhgb8A0A140LI48 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhgb8A0A140LI48 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Pcdhgb8A0A140LI48 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhgb8A0A140LI48 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhgb8A0A140LI48 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Pcdhgb8A0A140LI48 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms