Protein–RNA interactions for Protein: A0A0G2JFS9

Atg4a-ps, Cysteine protease, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4a-psA0A0G2JFS9 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Atg4a-psA0A0G2JFS9 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Atg4a-psA0A0G2JFS9 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Atg4a-psA0A0G2JFS9 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Atg4a-psA0A0G2JFS9 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Atg4a-psA0A0G2JFS9 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Atg4a-psA0A0G2JFS9 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Atg4a-psA0A0G2JFS9 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Atg4a-psA0A0G2JFS9 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Atg4a-psA0A0G2JFS9 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC20.78■□□□□ 0.92
Atg4a-psA0A0G2JFS9 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC20.78■□□□□ 0.92
Atg4a-psA0A0G2JFS9 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Atg4a-psA0A0G2JFS9 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Atg4a-psA0A0G2JFS9 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Atg4a-psA0A0G2JFS9 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Atg4a-psA0A0G2JFS9 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Atg4a-psA0A0G2JFS9 Gm13559-201ENSMUST00000120476 863 ntBASIC20.78■□□□□ 0.92
Atg4a-psA0A0G2JFS9 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC20.78■□□□□ 0.92
Atg4a-psA0A0G2JFS9 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Atg4a-psA0A0G2JFS9 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Atg4a-psA0A0G2JFS9 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Atg4a-psA0A0G2JFS9 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Atg4a-psA0A0G2JFS9 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Atg4a-psA0A0G2JFS9 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Atg4a-psA0A0G2JFS9 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC20.77■□□□□ 0.92
Atg4a-psA0A0G2JFS9 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Atg4a-psA0A0G2JFS9 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Atg4a-psA0A0G2JFS9 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC20.77■□□□□ 0.92
Atg4a-psA0A0G2JFS9 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Atg4a-psA0A0G2JFS9 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Atg4a-psA0A0G2JFS9 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Atg4a-psA0A0G2JFS9 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Atg4a-psA0A0G2JFS9 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Atg4a-psA0A0G2JFS9 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Atg4a-psA0A0G2JFS9 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Atg4a-psA0A0G2JFS9 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC20.77■□□□□ 0.92
Atg4a-psA0A0G2JFS9 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Atg4a-psA0A0G2JFS9 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Atg4a-psA0A0G2JFS9 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Atg4a-psA0A0G2JFS9 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Atg4a-psA0A0G2JFS9 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Atg4a-psA0A0G2JFS9 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Atg4a-psA0A0G2JFS9 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Atg4a-psA0A0G2JFS9 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.91
Atg4a-psA0A0G2JFS9 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.91
Atg4a-psA0A0G2JFS9 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.91
Atg4a-psA0A0G2JFS9 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Atg4a-psA0A0G2JFS9 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Atg4a-psA0A0G2JFS9 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
Atg4a-psA0A0G2JFS9 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Atg4a-psA0A0G2JFS9 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Atg4a-psA0A0G2JFS9 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC20.76■□□□□ 0.91
Atg4a-psA0A0G2JFS9 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Atg4a-psA0A0G2JFS9 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Atg4a-psA0A0G2JFS9 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Atg4a-psA0A0G2JFS9 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Atg4a-psA0A0G2JFS9 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Atg4a-psA0A0G2JFS9 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Atg4a-psA0A0G2JFS9 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Atg4a-psA0A0G2JFS9 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Atg4a-psA0A0G2JFS9 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Atg4a-psA0A0G2JFS9 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Atg4a-psA0A0G2JFS9 Gm15565-201ENSMUST00000118890 427 ntBASIC20.75■□□□□ 0.91
Atg4a-psA0A0G2JFS9 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC20.75■□□□□ 0.91
Atg4a-psA0A0G2JFS9 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC20.75■□□□□ 0.91
Atg4a-psA0A0G2JFS9 Gm7370-201ENSMUST00000219471 767 ntBASIC20.75■□□□□ 0.91
Atg4a-psA0A0G2JFS9 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Atg4a-psA0A0G2JFS9 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Atg4a-psA0A0G2JFS9 AC154855.1-201ENSMUST00000227353 1458 ntBASIC20.75■□□□□ 0.91
Atg4a-psA0A0G2JFS9 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Atg4a-psA0A0G2JFS9 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
Atg4a-psA0A0G2JFS9 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC20.74■□□□□ 0.91
Atg4a-psA0A0G2JFS9 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Atg4a-psA0A0G2JFS9 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Atg4a-psA0A0G2JFS9 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Atg4a-psA0A0G2JFS9 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Atg4a-psA0A0G2JFS9 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Atg4a-psA0A0G2JFS9 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Atg4a-psA0A0G2JFS9 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Atg4a-psA0A0G2JFS9 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Atg4a-psA0A0G2JFS9 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC20.74■□□□□ 0.91
Atg4a-psA0A0G2JFS9 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Atg4a-psA0A0G2JFS9 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Atg4a-psA0A0G2JFS9 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Atg4a-psA0A0G2JFS9 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Atg4a-psA0A0G2JFS9 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Atg4a-psA0A0G2JFS9 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Atg4a-psA0A0G2JFS9 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Atg4a-psA0A0G2JFS9 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Atg4a-psA0A0G2JFS9 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Atg4a-psA0A0G2JFS9 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Atg4a-psA0A0G2JFS9 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Atg4a-psA0A0G2JFS9 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Atg4a-psA0A0G2JFS9 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Atg4a-psA0A0G2JFS9 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC20.73■□□□□ 0.91
Atg4a-psA0A0G2JFS9 Gm43799-201ENSMUST00000201845 579 ntBASIC20.73■□□□□ 0.91
Atg4a-psA0A0G2JFS9 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC20.73■□□□□ 0.91
Atg4a-psA0A0G2JFS9 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Atg4a-psA0A0G2JFS9 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Atg4a-psA0A0G2JFS9 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC20.73■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms