Protein–RNA interactions for Protein: A0A0B4J1H3

Trbv16, T cell receptor beta, variable 16 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv16A0A0B4J1H3 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trbv16A0A0B4J1H3 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trbv16A0A0B4J1H3 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trbv16A0A0B4J1H3 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trbv16A0A0B4J1H3 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trbv16A0A0B4J1H3 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trbv16A0A0B4J1H3 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trbv16A0A0B4J1H3 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Trbv16A0A0B4J1H3 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Trbv16A0A0B4J1H3 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trbv16A0A0B4J1H3 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trbv16A0A0B4J1H3 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Trbv16A0A0B4J1H3 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trbv16A0A0B4J1H3 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trbv16A0A0B4J1H3 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trbv16A0A0B4J1H3 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Trbv16A0A0B4J1H3 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trbv16A0A0B4J1H3 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC12.4□□□□□ -0.42
Trbv16A0A0B4J1H3 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trbv16A0A0B4J1H3 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trbv16A0A0B4J1H3 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trbv16A0A0B4J1H3 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Trbv16A0A0B4J1H3 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC12.4□□□□□ -0.42
Trbv16A0A0B4J1H3 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC12.4□□□□□ -0.42
Trbv16A0A0B4J1H3 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC12.4□□□□□ -0.42
Trbv16A0A0B4J1H3 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trbv16A0A0B4J1H3 AC122769.4-201ENSMUST00000228166 901 ntBASIC12.4□□□□□ -0.42
Trbv16A0A0B4J1H3 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Trbv16A0A0B4J1H3 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trbv16A0A0B4J1H3 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trbv16A0A0B4J1H3 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Trbv16A0A0B4J1H3 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Trbv16A0A0B4J1H3 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trbv16A0A0B4J1H3 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Trbv16A0A0B4J1H3 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trbv16A0A0B4J1H3 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trbv16A0A0B4J1H3 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Trbv16A0A0B4J1H3 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Trbv16A0A0B4J1H3 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Trbv16A0A0B4J1H3 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Trbv16A0A0B4J1H3 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv16A0A0B4J1H3 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv16A0A0B4J1H3 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv16A0A0B4J1H3 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv16A0A0B4J1H3 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv16A0A0B4J1H3 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv16A0A0B4J1H3 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Trbv16A0A0B4J1H3 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Trbv16A0A0B4J1H3 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC12.39□□□□□ -0.43
Trbv16A0A0B4J1H3 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv16A0A0B4J1H3 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv16A0A0B4J1H3 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC12.39□□□□□ -0.43
Trbv16A0A0B4J1H3 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv16A0A0B4J1H3 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv16A0A0B4J1H3 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC12.39□□□□□ -0.43
Trbv16A0A0B4J1H3 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv16A0A0B4J1H3 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv16A0A0B4J1H3 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv16A0A0B4J1H3 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv16A0A0B4J1H3 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv16A0A0B4J1H3 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Trbv16A0A0B4J1H3 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Trbv16A0A0B4J1H3 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv16A0A0B4J1H3 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv16A0A0B4J1H3 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC12.39□□□□□ -0.43
Trbv16A0A0B4J1H3 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv16A0A0B4J1H3 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv16A0A0B4J1H3 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv16A0A0B4J1H3 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trbv16A0A0B4J1H3 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trbv16A0A0B4J1H3 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trbv16A0A0B4J1H3 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trbv16A0A0B4J1H3 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trbv16A0A0B4J1H3 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trbv16A0A0B4J1H3 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trbv16A0A0B4J1H3 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trbv16A0A0B4J1H3 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trbv16A0A0B4J1H3 Gm45412-201ENSMUST00000210217 2275 ntBASIC12.38□□□□□ -0.43
Trbv16A0A0B4J1H3 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trbv16A0A0B4J1H3 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trbv16A0A0B4J1H3 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trbv16A0A0B4J1H3 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trbv16A0A0B4J1H3 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trbv16A0A0B4J1H3 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trbv16A0A0B4J1H3 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trbv16A0A0B4J1H3 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trbv16A0A0B4J1H3 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC12.38□□□□□ -0.43
Trbv16A0A0B4J1H3 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trbv16A0A0B4J1H3 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trbv16A0A0B4J1H3 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trbv16A0A0B4J1H3 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trbv16A0A0B4J1H3 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trbv16A0A0B4J1H3 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trbv16A0A0B4J1H3 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trbv16A0A0B4J1H3 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trbv16A0A0B4J1H3 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trbv16A0A0B4J1H3 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trbv16A0A0B4J1H3 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trbv16A0A0B4J1H3 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Trbv16A0A0B4J1H3 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms