Protein–RNA interactions for Protein: A0A0A6YYE2

Trbv3, T cell receptor beta, variable 3 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv3A0A0A6YYE2 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC13.23□□□□□ -0.29
Trbv3A0A0A6YYE2 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trbv3A0A0A6YYE2 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trbv3A0A0A6YYE2 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trbv3A0A0A6YYE2 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trbv3A0A0A6YYE2 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trbv3A0A0A6YYE2 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trbv3A0A0A6YYE2 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trbv3A0A0A6YYE2 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trbv3A0A0A6YYE2 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trbv3A0A0A6YYE2 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Trbv3A0A0A6YYE2 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trbv3A0A0A6YYE2 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trbv3A0A0A6YYE2 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trbv3A0A0A6YYE2 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Trbv3A0A0A6YYE2 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trbv3A0A0A6YYE2 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trbv3A0A0A6YYE2 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trbv3A0A0A6YYE2 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trbv3A0A0A6YYE2 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trbv3A0A0A6YYE2 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trbv3A0A0A6YYE2 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trbv3A0A0A6YYE2 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trbv3A0A0A6YYE2 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trbv3A0A0A6YYE2 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC13.22□□□□□ -0.29
Trbv3A0A0A6YYE2 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trbv3A0A0A6YYE2 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trbv3A0A0A6YYE2 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Trbv3A0A0A6YYE2 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trbv3A0A0A6YYE2 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trbv3A0A0A6YYE2 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trbv3A0A0A6YYE2 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Trbv3A0A0A6YYE2 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trbv3A0A0A6YYE2 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trbv3A0A0A6YYE2 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trbv3A0A0A6YYE2 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Trbv3A0A0A6YYE2 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trbv3A0A0A6YYE2 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Trbv3A0A0A6YYE2 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trbv3A0A0A6YYE2 Reep4-203ENSMUST00000226563 1444 ntBASIC13.22□□□□□ -0.29
Trbv3A0A0A6YYE2 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trbv3A0A0A6YYE2 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trbv3A0A0A6YYE2 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trbv3A0A0A6YYE2 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trbv3A0A0A6YYE2 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trbv3A0A0A6YYE2 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC13.21□□□□□ -0.29
Trbv3A0A0A6YYE2 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
Trbv3A0A0A6YYE2 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trbv3A0A0A6YYE2 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trbv3A0A0A6YYE2 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC13.21□□□□□ -0.29
Trbv3A0A0A6YYE2 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC13.21□□□□□ -0.29
Trbv3A0A0A6YYE2 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trbv3A0A0A6YYE2 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trbv3A0A0A6YYE2 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trbv3A0A0A6YYE2 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trbv3A0A0A6YYE2 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC13.21□□□□□ -0.3
Trbv3A0A0A6YYE2 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trbv3A0A0A6YYE2 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trbv3A0A0A6YYE2 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trbv3A0A0A6YYE2 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Trbv3A0A0A6YYE2 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trbv3A0A0A6YYE2 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Trbv3A0A0A6YYE2 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trbv3A0A0A6YYE2 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC13.2□□□□□ -0.3
Trbv3A0A0A6YYE2 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Trbv3A0A0A6YYE2 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trbv3A0A0A6YYE2 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Trbv3A0A0A6YYE2 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trbv3A0A0A6YYE2 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trbv3A0A0A6YYE2 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trbv3A0A0A6YYE2 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trbv3A0A0A6YYE2 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
Trbv3A0A0A6YYE2 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC13.2□□□□□ -0.3
Trbv3A0A0A6YYE2 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trbv3A0A0A6YYE2 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trbv3A0A0A6YYE2 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
Trbv3A0A0A6YYE2 Gm9988-201ENSMUST00000069786 435 ntBASIC13.2□□□□□ -0.3
Trbv3A0A0A6YYE2 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trbv3A0A0A6YYE2 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trbv3A0A0A6YYE2 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trbv3A0A0A6YYE2 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trbv3A0A0A6YYE2 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trbv3A0A0A6YYE2 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trbv3A0A0A6YYE2 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trbv3A0A0A6YYE2 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC13.2□□□□□ -0.3
Trbv3A0A0A6YYE2 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trbv3A0A0A6YYE2 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trbv3A0A0A6YYE2 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trbv3A0A0A6YYE2 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trbv3A0A0A6YYE2 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trbv3A0A0A6YYE2 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trbv3A0A0A6YYE2 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trbv3A0A0A6YYE2 Gm19721-201ENSMUST00000195284 1764 ntBASIC13.2□□□□□ -0.3
Trbv3A0A0A6YYE2 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trbv3A0A0A6YYE2 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trbv3A0A0A6YYE2 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trbv3A0A0A6YYE2 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trbv3A0A0A6YYE2 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trbv3A0A0A6YYE2 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trbv3A0A0A6YYE2 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms