Protein–RNA interactions for Protein: A0A075B6B4

Trav6-4, T cell receptor alpha variable 6-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-4A0A075B6B4 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6-4A0A075B6B4 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC13.19□□□□□ -0.3
Trav6-4A0A075B6B4 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6-4A0A075B6B4 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC13.19□□□□□ -0.3
Trav6-4A0A075B6B4 Gm38027-201ENSMUST00000192315 235 ntBASIC13.19□□□□□ -0.3
Trav6-4A0A075B6B4 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6-4A0A075B6B4 Arhgef4-208ENSMUST00000211073 171 ntBASIC13.19□□□□□ -0.3
Trav6-4A0A075B6B4 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC13.19□□□□□ -0.3
Trav6-4A0A075B6B4 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6-4A0A075B6B4 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC13.19□□□□□ -0.3
Trav6-4A0A075B6B4 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6-4A0A075B6B4 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6-4A0A075B6B4 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Trav6-4A0A075B6B4 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6-4A0A075B6B4 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6-4A0A075B6B4 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6-4A0A075B6B4 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Trav6-4A0A075B6B4 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6-4A0A075B6B4 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6-4A0A075B6B4 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6-4A0A075B6B4 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Trav6-4A0A075B6B4 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
Trav6-4A0A075B6B4 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6-4A0A075B6B4 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC13.18□□□□□ -0.3
Trav6-4A0A075B6B4 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6-4A0A075B6B4 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC13.18□□□□□ -0.3
Trav6-4A0A075B6B4 Mir5122-201ENSMUST00000175004 89 ntBASIC13.18□□□□□ -0.3
Trav6-4A0A075B6B4 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6-4A0A075B6B4 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6-4A0A075B6B4 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Trav6-4A0A075B6B4 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6-4A0A075B6B4 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6-4A0A075B6B4 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6-4A0A075B6B4 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6-4A0A075B6B4 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6-4A0A075B6B4 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Trav6-4A0A075B6B4 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
Trav6-4A0A075B6B4 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6-4A0A075B6B4 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6-4A0A075B6B4 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6-4A0A075B6B4 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6-4A0A075B6B4 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6-4A0A075B6B4 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
Trav6-4A0A075B6B4 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6-4A0A075B6B4 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6-4A0A075B6B4 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6-4A0A075B6B4 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Trav6-4A0A075B6B4 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6-4A0A075B6B4 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC13.17□□□□□ -0.3
Trav6-4A0A075B6B4 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Trav6-4A0A075B6B4 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6-4A0A075B6B4 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6-4A0A075B6B4 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6-4A0A075B6B4 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC13.17□□□□□ -0.3
Trav6-4A0A075B6B4 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6-4A0A075B6B4 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC13.17□□□□□ -0.3
Trav6-4A0A075B6B4 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6-4A0A075B6B4 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6-4A0A075B6B4 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6-4A0A075B6B4 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6-4A0A075B6B4 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC13.17□□□□□ -0.3
Trav6-4A0A075B6B4 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Trav6-4A0A075B6B4 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Trav6-4A0A075B6B4 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6-4A0A075B6B4 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
Trav6-4A0A075B6B4 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6-4A0A075B6B4 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Trav6-4A0A075B6B4 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6-4A0A075B6B4 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6-4A0A075B6B4 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Trav6-4A0A075B6B4 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6-4A0A075B6B4 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6-4A0A075B6B4 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6-4A0A075B6B4 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6-4A0A075B6B4 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC13.16□□□□□ -0.3
Trav6-4A0A075B6B4 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC13.16□□□□□ -0.3
Trav6-4A0A075B6B4 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC13.16□□□□□ -0.3
Trav6-4A0A075B6B4 Otx2os1-204ENSMUST00000227221 751 ntBASIC13.16□□□□□ -0.3
Trav6-4A0A075B6B4 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6-4A0A075B6B4 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6-4A0A075B6B4 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6-4A0A075B6B4 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6-4A0A075B6B4 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6-4A0A075B6B4 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6-4A0A075B6B4 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6-4A0A075B6B4 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6-4A0A075B6B4 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6-4A0A075B6B4 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6-4A0A075B6B4 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6-4A0A075B6B4 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6-4A0A075B6B4 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Trav6-4A0A075B6B4 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6-4A0A075B6B4 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Trav6-4A0A075B6B4 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav6-4A0A075B6B4 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Trav6-4A0A075B6B4 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Trav6-4A0A075B6B4 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
Trav6-4A0A075B6B4 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC13.15□□□□□ -0.3
Trav6-4A0A075B6B4 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC13.15□□□□□ -0.3
Trav6-4A0A075B6B4 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms