Protein–RNA interactions for Protein: A0A075B638

Trav4-2, T cell receptor alpha variable 4-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-2A0A075B638 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav4-2A0A075B638 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav4-2A0A075B638 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav4-2A0A075B638 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav4-2A0A075B638 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Trav4-2A0A075B638 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav4-2A0A075B638 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav4-2A0A075B638 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav4-2A0A075B638 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav4-2A0A075B638 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trav4-2A0A075B638 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trav4-2A0A075B638 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav4-2A0A075B638 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav4-2A0A075B638 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC13.58□□□□□ -0.24
Trav4-2A0A075B638 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav4-2A0A075B638 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Trav4-2A0A075B638 Gm27454-201ENSMUST00000185090 204 ntBASIC13.58□□□□□ -0.24
Trav4-2A0A075B638 AC140264.2-202ENSMUST00000218746 817 ntBASIC13.58□□□□□ -0.24
Trav4-2A0A075B638 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav4-2A0A075B638 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav4-2A0A075B638 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav4-2A0A075B638 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Trav4-2A0A075B638 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav4-2A0A075B638 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC13.58□□□□□ -0.24
Trav4-2A0A075B638 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav4-2A0A075B638 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav4-2A0A075B638 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Trav4-2A0A075B638 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC13.58□□□□□ -0.24
Trav4-2A0A075B638 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav4-2A0A075B638 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav4-2A0A075B638 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav4-2A0A075B638 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav4-2A0A075B638 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav4-2A0A075B638 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav4-2A0A075B638 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav4-2A0A075B638 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav4-2A0A075B638 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC13.57□□□□□ -0.24
Trav4-2A0A075B638 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav4-2A0A075B638 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav4-2A0A075B638 Gm6420-201ENSMUST00000193885 723 ntBASIC13.57□□□□□ -0.24
Trav4-2A0A075B638 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav4-2A0A075B638 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav4-2A0A075B638 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav4-2A0A075B638 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Trav4-2A0A075B638 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav4-2A0A075B638 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav4-2A0A075B638 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC13.57□□□□□ -0.24
Trav4-2A0A075B638 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav4-2A0A075B638 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav4-2A0A075B638 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav4-2A0A075B638 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav4-2A0A075B638 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav4-2A0A075B638 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav4-2A0A075B638 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav4-2A0A075B638 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC13.56□□□□□ -0.24
Trav4-2A0A075B638 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav4-2A0A075B638 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Trav4-2A0A075B638 Gm9867-201ENSMUST00000192212 2647 ntBASIC13.56□□□□□ -0.24
Trav4-2A0A075B638 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC13.56□□□□□ -0.24
Trav4-2A0A075B638 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav4-2A0A075B638 Gm13401-201ENSMUST00000117074 291 ntBASIC13.56□□□□□ -0.24
Trav4-2A0A075B638 Nespas-201ENSMUST00000143738 1083 ntBASIC13.56□□□□□ -0.24
Trav4-2A0A075B638 Appbp2os-202ENSMUST00000206972 447 ntBASIC13.56□□□□□ -0.24
Trav4-2A0A075B638 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav4-2A0A075B638 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav4-2A0A075B638 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav4-2A0A075B638 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC13.56□□□□□ -0.24
Trav4-2A0A075B638 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav4-2A0A075B638 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav4-2A0A075B638 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav4-2A0A075B638 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav4-2A0A075B638 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav4-2A0A075B638 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav4-2A0A075B638 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav4-2A0A075B638 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav4-2A0A075B638 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav4-2A0A075B638 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav4-2A0A075B638 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav4-2A0A075B638 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav4-2A0A075B638 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC13.55□□□□□ -0.24
Trav4-2A0A075B638 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC13.55□□□□□ -0.24
Trav4-2A0A075B638 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav4-2A0A075B638 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Trav4-2A0A075B638 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav4-2A0A075B638 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav4-2A0A075B638 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav4-2A0A075B638 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav4-2A0A075B638 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav4-2A0A075B638 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav4-2A0A075B638 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav4-2A0A075B638 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav4-2A0A075B638 Mir2861-201ENSMUST00000175539 82 ntBASIC13.55□□□□□ -0.24
Trav4-2A0A075B638 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC13.55□□□□□ -0.24
Trav4-2A0A075B638 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav4-2A0A075B638 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Trav4-2A0A075B638 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav4-2A0A075B638 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav4-2A0A075B638 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav4-2A0A075B638 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav4-2A0A075B638 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms