Protein–RNA interactions for Protein: A0A075B633

Trav8n-2, T cell receptor alpha variable 8n-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8n-2A0A075B633 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC15.66■□□□□ 0.1
Trav8n-2A0A075B633 Gm15794-201ENSMUST00000120182 631 ntBASIC15.66■□□□□ 0.1
Trav8n-2A0A075B633 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC15.66■□□□□ 0.1
Trav8n-2A0A075B633 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Trav8n-2A0A075B633 Mir8098-201ENSMUST00000184011 137 ntBASIC15.66■□□□□ 0.1
Trav8n-2A0A075B633 Gm38342-201ENSMUST00000195710 2980 ntBASIC15.66■□□□□ 0.1
Trav8n-2A0A075B633 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav8n-2A0A075B633 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC15.66■□□□□ 0.1
Trav8n-2A0A075B633 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Trav8n-2A0A075B633 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Trav8n-2A0A075B633 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav8n-2A0A075B633 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trav8n-2A0A075B633 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav8n-2A0A075B633 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Trav8n-2A0A075B633 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav8n-2A0A075B633 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav8n-2A0A075B633 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav8n-2A0A075B633 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav8n-2A0A075B633 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trav8n-2A0A075B633 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trav8n-2A0A075B633 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav8n-2A0A075B633 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav8n-2A0A075B633 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trav8n-2A0A075B633 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav8n-2A0A075B633 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC15.65■□□□□ 0.1
Trav8n-2A0A075B633 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC15.65■□□□□ 0.1
Trav8n-2A0A075B633 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC15.65■□□□□ 0.1
Trav8n-2A0A075B633 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Trav8n-2A0A075B633 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav8n-2A0A075B633 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav8n-2A0A075B633 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav8n-2A0A075B633 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav8n-2A0A075B633 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav8n-2A0A075B633 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC15.64■□□□□ 0.1
Trav8n-2A0A075B633 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.1
Trav8n-2A0A075B633 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav8n-2A0A075B633 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav8n-2A0A075B633 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav8n-2A0A075B633 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Trav8n-2A0A075B633 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trav8n-2A0A075B633 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav8n-2A0A075B633 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC15.64■□□□□ 0.09
Trav8n-2A0A075B633 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Trav8n-2A0A075B633 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC15.64■□□□□ 0.09
Trav8n-2A0A075B633 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav8n-2A0A075B633 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav8n-2A0A075B633 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav8n-2A0A075B633 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Trav8n-2A0A075B633 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC15.64■□□□□ 0.09
Trav8n-2A0A075B633 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC15.64■□□□□ 0.09
Trav8n-2A0A075B633 Gm43514-201ENSMUST00000198852 424 ntBASIC15.64■□□□□ 0.09
Trav8n-2A0A075B633 Gm43347-201ENSMUST00000200226 580 ntBASIC15.64■□□□□ 0.09
Trav8n-2A0A075B633 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trav8n-2A0A075B633 Gm6443-201ENSMUST00000203599 874 ntBASIC15.64■□□□□ 0.09
Trav8n-2A0A075B633 AC124569.2-201ENSMUST00000225998 818 ntBASIC15.64■□□□□ 0.09
Trav8n-2A0A075B633 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav8n-2A0A075B633 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav8n-2A0A075B633 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav8n-2A0A075B633 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Trav8n-2A0A075B633 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav8n-2A0A075B633 Gm35558-201ENSMUST00000222675 2219 ntBASIC15.64■□□□□ 0.09
Trav8n-2A0A075B633 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trav8n-2A0A075B633 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav8n-2A0A075B633 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav8n-2A0A075B633 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trav8n-2A0A075B633 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Trav8n-2A0A075B633 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Trav8n-2A0A075B633 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav8n-2A0A075B633 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav8n-2A0A075B633 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav8n-2A0A075B633 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav8n-2A0A075B633 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav8n-2A0A075B633 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
Trav8n-2A0A075B633 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav8n-2A0A075B633 Gm45141-201ENSMUST00000206502 1888 ntBASIC15.63■□□□□ 0.09
Trav8n-2A0A075B633 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
Trav8n-2A0A075B633 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav8n-2A0A075B633 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trav8n-2A0A075B633 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trav8n-2A0A075B633 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav8n-2A0A075B633 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav8n-2A0A075B633 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
Trav8n-2A0A075B633 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC15.62■□□□□ 0.09
Trav8n-2A0A075B633 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav8n-2A0A075B633 Gm27459-201ENSMUST00000184860 107 ntBASIC15.62■□□□□ 0.09
Trav8n-2A0A075B633 Gm5864-201ENSMUST00000202263 970 ntBASIC15.62■□□□□ 0.09
Trav8n-2A0A075B633 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav8n-2A0A075B633 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav8n-2A0A075B633 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
Trav8n-2A0A075B633 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav8n-2A0A075B633 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC15.62■□□□□ 0.09
Trav8n-2A0A075B633 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav8n-2A0A075B633 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trav8n-2A0A075B633 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav8n-2A0A075B633 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav8n-2A0A075B633 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav8n-2A0A075B633 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Trav8n-2A0A075B633 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav8n-2A0A075B633 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav8n-2A0A075B633 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms