Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Gm37402-201ENSMUST00000194525 5000 ntBASIC3.14□□□□□ -1.91
H2afb3S4R1G7 Gm37777-201ENSMUST00000195546 3366 ntBASIC3.14□□□□□ -1.91
H2afb3S4R1G7 Olfr267-202ENSMUST00000216719 4050 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
H2afb3S4R1G7 Mir291a-201ENSMUST00000104815 82 ntBASIC3.14□□□□□ -1.91
H2afb3S4R1G7 Gm24855-201ENSMUST00000104848 97 ntBASIC3.14□□□□□ -1.91
H2afb3S4R1G7 Gm5938-201ENSMUST00000114030 775 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
H2afb3S4R1G7 Gm25316-201ENSMUST00000116826 118 ntBASIC3.14□□□□□ -1.91
H2afb3S4R1G7 Gm15010-201ENSMUST00000117153 407 ntBASIC3.14□□□□□ -1.91
H2afb3S4R1G7 Gm15733-201ENSMUST00000132957 242 ntBASIC3.14□□□□□ -1.91
H2afb3S4R1G7 Gm5963-201ENSMUST00000143451 236 ntBASIC3.14□□□□□ -1.91
H2afb3S4R1G7 Gm26101-201ENSMUST00000157246 105 ntBASIC3.14□□□□□ -1.91
H2afb3S4R1G7 Gm17062-201ENSMUST00000166987 461 ntBASIC3.14□□□□□ -1.91
H2afb3S4R1G7 Mir6335-201ENSMUST00000184081 98 ntBASIC3.14□□□□□ -1.91
H2afb3S4R1G7 Gm27189-201ENSMUST00000184119 190 ntBASIC3.14□□□□□ -1.91
H2afb3S4R1G7 Mir8106-201ENSMUST00000184520 139 ntBASIC3.14□□□□□ -1.91
H2afb3S4R1G7 Mir195b-201ENSMUST00000184814 97 ntBASIC3.14□□□□□ -1.91
H2afb3S4R1G7 Gm28030-201ENSMUST00000184987 138 ntBASIC3.14□□□□□ -1.91
H2afb3S4R1G7 Gm28702-201ENSMUST00000188276 253 ntTSL 5 BASIC3.14□□□□□ -1.91
H2afb3S4R1G7 Gm7837-201ENSMUST00000190873 412 ntBASIC3.14□□□□□ -1.91
H2afb3S4R1G7 Trav5d-2-201ENSMUST00000196107 275 ntBASIC3.14□□□□□ -1.91
H2afb3S4R1G7 Trav5n-2-201ENSMUST00000197136 275 ntBASIC3.14□□□□□ -1.91
H2afb3S4R1G7 Gm43286-201ENSMUST00000197420 424 ntBASIC3.14□□□□□ -1.91
H2afb3S4R1G7 Gm25203-202ENSMUST00000200458 216 ntBASIC3.14□□□□□ -1.91
H2afb3S4R1G7 Gm18453-201ENSMUST00000208000 626 ntBASIC3.14□□□□□ -1.91
H2afb3S4R1G7 Gm45403-201ENSMUST00000209453 276 ntBASIC3.14□□□□□ -1.91
H2afb3S4R1G7 Gm45686-201ENSMUST00000210259 460 ntTSL 5 BASIC3.14□□□□□ -1.91
H2afb3S4R1G7 Gm45600-201ENSMUST00000210828 234 ntTSL 5 BASIC3.14□□□□□ -1.91
H2afb3S4R1G7 AC140477.1-201ENSMUST00000222354 246 ntBASIC3.14□□□□□ -1.91
H2afb3S4R1G7 AC133156.1-202ENSMUST00000227284 363 ntBASIC3.14□□□□□ -1.91
H2afb3S4R1G7 AC157572.3-201ENSMUST00000227288 303 ntBASIC3.14□□□□□ -1.91
H2afb3S4R1G7 Snora23-201ENSMUST00000082517 184 ntBASIC3.14□□□□□ -1.91
H2afb3S4R1G7 Gm25203-201ENSMUST00000082842 215 ntBASIC3.14□□□□□ -1.91
H2afb3S4R1G7 Gm5416-201ENSMUST00000089628 294 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
H2afb3S4R1G7 Gm43715-201ENSMUST00000196307 2715 ntBASIC3.14□□□□□ -1.91
H2afb3S4R1G7 Vmn1r30-203ENSMUST00000227466 1798 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
H2afb3S4R1G7 Vmn1r66-205ENSMUST00000228622 3304 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
H2afb3S4R1G7 Olfr1369-ps1-204ENSMUST00000215207 3794 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
H2afb3S4R1G7 Vmn2r106-201ENSMUST00000167464 2589 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
H2afb3S4R1G7 2410141K09Rik-202ENSMUST00000172579 2587 ntAPPRIS P1 TSL 3 BASIC3.13□□□□□ -1.91
H2afb3S4R1G7 Ms4a14-201ENSMUST00000187467 4065 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
H2afb3S4R1G7 Olfr597-202ENSMUST00000216456 2727 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
H2afb3S4R1G7 Zfp493-201ENSMUST00000164936 3258 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
H2afb3S4R1G7 Igkv13-84-201ENSMUST00000103339 347 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
H2afb3S4R1G7 Gm23948-201ENSMUST00000104030 132 ntBASIC3.13□□□□□ -1.91
H2afb3S4R1G7 Gm22496-201ENSMUST00000104493 88 ntBASIC3.13□□□□□ -1.91
H2afb3S4R1G7 Cyp4b1-ps2-201ENSMUST00000119563 333 ntBASIC3.13□□□□□ -1.91
H2afb3S4R1G7 Gm14687-201ENSMUST00000120206 363 ntBASIC3.13□□□□□ -1.91
H2afb3S4R1G7 Gm14810-201ENSMUST00000121628 486 ntBASIC3.13□□□□□ -1.91
H2afb3S4R1G7 Gm12858-201ENSMUST00000121913 208 ntBASIC3.13□□□□□ -1.91
H2afb3S4R1G7 Gm14100-201ENSMUST00000125575 651 ntTSL 3 BASIC3.13□□□□□ -1.91
H2afb3S4R1G7 Gm12238-201ENSMUST00000127764 124 ntBASIC3.13□□□□□ -1.91
H2afb3S4R1G7 Gm15718-201ENSMUST00000131085 311 ntTSL 3 BASIC3.13□□□□□ -1.91
H2afb3S4R1G7 Gm14684-201ENSMUST00000145722 123 ntTSL 5 BASIC3.13□□□□□ -1.91
H2afb3S4R1G7 Gm6265-201ENSMUST00000149263 231 ntBASIC3.13□□□□□ -1.91
H2afb3S4R1G7 Gm26276-201ENSMUST00000157099 109 ntBASIC3.13□□□□□ -1.91
H2afb3S4R1G7 Gm23120-201ENSMUST00000157654 287 ntBASIC3.13□□□□□ -1.91
H2afb3S4R1G7 Krtap27-1-201ENSMUST00000165580 646 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
H2afb3S4R1G7 Gm25175-201ENSMUST00000178712 79 ntBASIC3.13□□□□□ -1.91
H2afb3S4R1G7 Cypt14-201ENSMUST00000179096 508 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
H2afb3S4R1G7 Mpc1-ps-201ENSMUST00000181662 330 ntBASIC3.13□□□□□ -1.91
H2afb3S4R1G7 1700015G11Rik-203ENSMUST00000185841 305 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
H2afb3S4R1G7 Gm28148-201ENSMUST00000186924 697 ntBASIC3.13□□□□□ -1.91
H2afb3S4R1G7 Gm28534-201ENSMUST00000187744 676 ntBASIC3.13□□□□□ -1.91
H2afb3S4R1G7 Gm29232-201ENSMUST00000189100 297 ntTSL 5 BASIC3.13□□□□□ -1.91
H2afb3S4R1G7 Gm19774-201ENSMUST00000190667 114 ntBASIC3.13□□□□□ -1.91
H2afb3S4R1G7 Gm37338-201ENSMUST00000191986 127 ntBASIC3.13□□□□□ -1.91
H2afb3S4R1G7 Gm42825-201ENSMUST00000198883 723 ntTSL 2 BASIC3.13□□□□□ -1.91
H2afb3S4R1G7 Rpl18a-ps3-201ENSMUST00000198938 171 ntBASIC3.13□□□□□ -1.91
H2afb3S4R1G7 Olfr1285-201ENSMUST00000208523 903 ntBASIC3.13□□□□□ -1.91
H2afb3S4R1G7 Gm35405-201ENSMUST00000218754 400 ntBASIC3.13□□□□□ -1.91
H2afb3S4R1G7 AC129202.3-201ENSMUST00000224413 733 ntBASIC3.13□□□□□ -1.91
H2afb3S4R1G7 Znrd1as-201ENSMUST00000040177 976 ntAPPRIS P2 TSL 1 (best) BASIC3.13□□□□□ -1.91
H2afb3S4R1G7 Gm25411-201ENSMUST00000083760 151 ntBASIC3.13□□□□□ -1.91
H2afb3S4R1G7 Gm15697-201ENSMUST00000121946 2902 ntBASIC3.13□□□□□ -1.91
H2afb3S4R1G7 Olfr729-203ENSMUST00000215327 4220 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
H2afb3S4R1G7 Olfr729-204ENSMUST00000215451 4236 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
H2afb3S4R1G7 Vmn2r75-201ENSMUST00000167830 2562 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
H2afb3S4R1G7 Gm3584-201ENSMUST00000173822 2565 ntBASIC3.13□□□□□ -1.91
H2afb3S4R1G7 Zfp280c-204ENSMUST00000114940 3863 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
H2afb3S4R1G7 Olfr735-202ENSMUST00000216634 3860 ntAPPRIS ALT2 TSL 3 BASIC3.13□□□□□ -1.91
H2afb3S4R1G7 Olfr107-202ENSMUST00000215894 2512 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
H2afb3S4R1G7 Zfp273-203ENSMUST00000181391 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
H2afb3S4R1G7 5730507A11Rik-201ENSMUST00000204297 3371 ntBASIC3.12□□□□□ -1.91
H2afb3S4R1G7 Gm45884-201ENSMUST00000209540 3416 ntBASIC3.12□□□□□ -1.91
H2afb3S4R1G7 Macf1-203ENSMUST00000097897 23495 ntAPPRIS P2 TSL 1 (best) BASIC3.12□□□□□ -1.91
H2afb3S4R1G7 Gm42585-201ENSMUST00000198731 4020 ntBASIC3.12□□□□□ -1.91
H2afb3S4R1G7 Igkv9-124-201ENSMUST00000103312 287 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
H2afb3S4R1G7 Igkv7-33-201ENSMUST00000103376 362 ntAPPRIS ALT2 BASIC3.12□□□□□ -1.91
H2afb3S4R1G7 Mir466b-8-201ENSMUST00000103883 86 ntBASIC3.12□□□□□ -1.91
H2afb3S4R1G7 Gm22936-201ENSMUST00000103955 126 ntBASIC3.12□□□□□ -1.91
H2afb3S4R1G7 Gm13167-201ENSMUST00000118554 578 ntBASIC3.12□□□□□ -1.91
H2afb3S4R1G7 Gm5762-201ENSMUST00000119204 258 ntBASIC3.12□□□□□ -1.91
H2afb3S4R1G7 Gm11785-201ENSMUST00000120165 601 ntBASIC3.12□□□□□ -1.91
H2afb3S4R1G7 Gm14581-201ENSMUST00000121726 198 ntBASIC3.12□□□□□ -1.91
H2afb3S4R1G7 Gm22561-201ENSMUST00000157331 84 ntBASIC3.12□□□□□ -1.91
H2afb3S4R1G7 Nron-204ENSMUST00000158971 370 ntBASIC3.12□□□□□ -1.91
H2afb3S4R1G7 Mir3106-201ENSMUST00000175401 82 ntBASIC3.12□□□□□ -1.91
H2afb3S4R1G7 Gm24862-201ENSMUST00000179103 79 ntBASIC3.12□□□□□ -1.91
H2afb3S4R1G7 Gm23310-201ENSMUST00000179105 79 ntBASIC3.12□□□□□ -1.91
H2afb3S4R1G7 Gm25461-201ENSMUST00000179293 79 ntBASIC3.12□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 77.3 ms