Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 Gm43326-201ENSMUST00000198459 1638 ntBASIC2.57□□□□□ -2
H2afb1S4R1E0 AC152951.2-201ENSMUST00000218293 3587 ntBASIC2.56□□□□□ -2
H2afb1S4R1E0 Gm8473-201ENSMUST00000176697 1885 ntBASIC2.56□□□□□ -2
H2afb1S4R1E0 Gm3867-202ENSMUST00000181639 2007 ntTSL 2 BASIC2.56□□□□□ -2
H2afb1S4R1E0 Olfr898-203ENSMUST00000217063 4169 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
H2afb1S4R1E0 Snord116l9-201ENSMUST00000101891 94 ntBASIC2.56□□□□□ -2
H2afb1S4R1E0 Gm22834-201ENSMUST00000102021 79 ntBASIC2.56□□□□□ -2
H2afb1S4R1E0 Gm26504-201ENSMUST00000102033 94 ntBASIC2.56□□□□□ -2
H2afb1S4R1E0 Gm22486-201ENSMUST00000116815 137 ntBASIC2.56□□□□□ -2
H2afb1S4R1E0 Gm14897-201ENSMUST00000118213 207 ntBASIC2.56□□□□□ -2
H2afb1S4R1E0 Gm12779-201ENSMUST00000121496 143 ntBASIC2.56□□□□□ -2
H2afb1S4R1E0 Gm22957-201ENSMUST00000122511 123 ntBASIC2.56□□□□□ -2
H2afb1S4R1E0 Gm22277-201ENSMUST00000157204 277 ntBASIC2.56□□□□□ -2
H2afb1S4R1E0 Gm24780-201ENSMUST00000157635 143 ntBASIC2.56□□□□□ -2
H2afb1S4R1E0 Gm23895-201ENSMUST00000158108 160 ntBASIC2.56□□□□□ -2
H2afb1S4R1E0 Vmn1r-ps68-201ENSMUST00000174638 399 ntBASIC2.56□□□□□ -2
H2afb1S4R1E0 Gm26502-201ENSMUST00000177732 94 ntBASIC2.56□□□□□ -2
H2afb1S4R1E0 Snord116l13-201ENSMUST00000177737 94 ntBASIC2.56□□□□□ -2
H2afb1S4R1E0 Gm25350-201ENSMUST00000177849 94 ntBASIC2.56□□□□□ -2
H2afb1S4R1E0 Snord116l15-201ENSMUST00000177940 94 ntBASIC2.56□□□□□ -2
H2afb1S4R1E0 Gm23446-201ENSMUST00000177977 94 ntBASIC2.56□□□□□ -2
H2afb1S4R1E0 Snord116l4-201ENSMUST00000177982 94 ntBASIC2.56□□□□□ -2
H2afb1S4R1E0 Gm26201-201ENSMUST00000178047 94 ntBASIC2.56□□□□□ -2
H2afb1S4R1E0 Gm24711-201ENSMUST00000178062 94 ntBASIC2.56□□□□□ -2
H2afb1S4R1E0 Gm24609-201ENSMUST00000178166 94 ntBASIC2.56□□□□□ -2
H2afb1S4R1E0 Gm23265-201ENSMUST00000178321 94 ntBASIC2.56□□□□□ -2
H2afb1S4R1E0 Gm22812-201ENSMUST00000178329 94 ntBASIC2.56□□□□□ -2
H2afb1S4R1E0 Snord116l3-201ENSMUST00000178370 94 ntBASIC2.56□□□□□ -2
H2afb1S4R1E0 Gm26246-201ENSMUST00000178388 94 ntBASIC2.56□□□□□ -2
H2afb1S4R1E0 Gm25155-201ENSMUST00000178450 94 ntBASIC2.56□□□□□ -2
H2afb1S4R1E0 Gm24760-201ENSMUST00000178530 94 ntBASIC2.56□□□□□ -2
H2afb1S4R1E0 Gm22285-201ENSMUST00000178576 94 ntBASIC2.56□□□□□ -2
H2afb1S4R1E0 Gm22417-201ENSMUST00000178656 94 ntBASIC2.56□□□□□ -2
H2afb1S4R1E0 Snord116l2-201ENSMUST00000178675 94 ntBASIC2.56□□□□□ -2
H2afb1S4R1E0 Gm26270-201ENSMUST00000178690 94 ntBASIC2.56□□□□□ -2
H2afb1S4R1E0 Snord116l16-201ENSMUST00000178777 94 ntBASIC2.56□□□□□ -2
H2afb1S4R1E0 Gm23313-201ENSMUST00000178931 94 ntBASIC2.56□□□□□ -2
H2afb1S4R1E0 Snord116l17-201ENSMUST00000178936 94 ntBASIC2.56□□□□□ -2
H2afb1S4R1E0 Gm23089-201ENSMUST00000178947 94 ntBASIC2.56□□□□□ -2
H2afb1S4R1E0 Snord116l10-201ENSMUST00000179053 94 ntBASIC2.56□□□□□ -2
H2afb1S4R1E0 Gm8532-201ENSMUST00000179174 461 ntBASIC2.56□□□□□ -2
H2afb1S4R1E0 Gm24153-201ENSMUST00000179280 94 ntBASIC2.56□□□□□ -2
H2afb1S4R1E0 Gm25597-201ENSMUST00000179388 94 ntBASIC2.56□□□□□ -2
H2afb1S4R1E0 Snord116l1-201ENSMUST00000179518 94 ntBASIC2.56□□□□□ -2
H2afb1S4R1E0 Gm25816-201ENSMUST00000179764 94 ntBASIC2.56□□□□□ -2
H2afb1S4R1E0 Snord116l8-201ENSMUST00000179889 94 ntBASIC2.56□□□□□ -2
H2afb1S4R1E0 Snord116l7-201ENSMUST00000179895 94 ntBASIC2.56□□□□□ -2
H2afb1S4R1E0 Snord116l5-201ENSMUST00000179927 94 ntBASIC2.56□□□□□ -2
H2afb1S4R1E0 Snord116l6-201ENSMUST00000179955 94 ntBASIC2.56□□□□□ -2
H2afb1S4R1E0 Gm26188-201ENSMUST00000179963 94 ntBASIC2.56□□□□□ -2
H2afb1S4R1E0 Gm23523-201ENSMUST00000180190 107 ntBASIC2.56□□□□□ -2
H2afb1S4R1E0 Gm26433-201ENSMUST00000180227 94 ntBASIC2.56□□□□□ -2
H2afb1S4R1E0 Gm23190-201ENSMUST00000180307 64 ntBASIC2.56□□□□□ -2
H2afb1S4R1E0 Snord116l11-201ENSMUST00000180312 94 ntBASIC2.56□□□□□ -2
H2afb1S4R1E0 Gm22128-201ENSMUST00000180346 94 ntBASIC2.56□□□□□ -2
H2afb1S4R1E0 Mir6907-201ENSMUST00000183764 71 ntBASIC2.56□□□□□ -2
H2afb1S4R1E0 Gm28217-201ENSMUST00000188613 648 ntTSL 5 BASIC2.56□□□□□ -2
H2afb1S4R1E0 Gm29350-201ENSMUST00000189141 541 ntBASIC2.56□□□□□ -2
H2afb1S4R1E0 Gm18551-201ENSMUST00000195594 642 ntBASIC2.56□□□□□ -2
H2afb1S4R1E0 Mirlet7f-1-201ENSMUST00000198652 89 ntBASIC2.56□□□□□ -2
H2afb1S4R1E0 Igkv1-115-201ENSMUST00000198714 302 ntBASIC2.56□□□□□ -2
H2afb1S4R1E0 Gm43578-201ENSMUST00000201250 459 ntBASIC2.56□□□□□ -2
H2afb1S4R1E0 AC100590.3-201ENSMUST00000219355 332 ntTSL 5 BASIC2.56□□□□□ -2
H2afb1S4R1E0 CT009713.9-201ENSMUST00000223604 389 ntBASIC2.56□□□□□ -2
H2afb1S4R1E0 Gm42445-201ENSMUST00000196996 2893 ntBASIC2.56□□□□□ -2
H2afb1S4R1E0 Csn1s2b-202ENSMUST00000101057 1668 ntTSL 1 (best) BASIC2.56□□□□□ -2
H2afb1S4R1E0 Vmn2r50-201ENSMUST00000074943 2586 ntAPPRIS P2 TSL 5 BASIC2.55□□□□□ -2
H2afb1S4R1E0 Mir743b-201ENSMUST00000104751 77 ntBASIC2.55□□□□□ -2
H2afb1S4R1E0 Mir669d-2-201ENSMUST00000116854 86 ntBASIC2.55□□□□□ -2
H2afb1S4R1E0 Rpl30-ps10-201ENSMUST00000117119 347 ntBASIC2.55□□□□□ -2
H2afb1S4R1E0 Gm14355-201ENSMUST00000117352 264 ntBASIC2.55□□□□□ -2
H2afb1S4R1E0 Gm12191-201ENSMUST00000118307 348 ntBASIC2.55□□□□□ -2
H2afb1S4R1E0 Gm9703-201ENSMUST00000119573 343 ntBASIC2.55□□□□□ -2
H2afb1S4R1E0 Rpl30-ps11-201ENSMUST00000119630 345 ntBASIC2.55□□□□□ -2
H2afb1S4R1E0 Rpl30-ps1-201ENSMUST00000119767 348 ntBASIC2.55□□□□□ -2
H2afb1S4R1E0 Gm11785-201ENSMUST00000120165 601 ntBASIC2.55□□□□□ -2
H2afb1S4R1E0 Gm14736-201ENSMUST00000121470 336 ntBASIC2.55□□□□□ -2
H2afb1S4R1E0 Gm14333-201ENSMUST00000130484 264 ntBASIC2.55□□□□□ -2
H2afb1S4R1E0 Btbd35f3-201ENSMUST00000140300 1943 ntAPPRIS P1 BASIC2.55□□□□□ -2
H2afb1S4R1E0 Zfp988-201ENSMUST00000148762 2800 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
H2afb1S4R1E0 Gm23476-201ENSMUST00000158881 274 ntBASIC2.55□□□□□ -2
H2afb1S4R1E0 Gm6264-202ENSMUST00000162896 1217 ntBASIC2.55□□□□□ -2
H2afb1S4R1E0 Gm24757-201ENSMUST00000176987 371 ntBASIC2.55□□□□□ -2
H2afb1S4R1E0 Gm24168-201ENSMUST00000178825 107 ntBASIC2.55□□□□□ -2
H2afb1S4R1E0 Mir6926-201ENSMUST00000184562 68 ntBASIC2.55□□□□□ -2
H2afb1S4R1E0 Gm27608-201ENSMUST00000184822 162 ntBASIC2.55□□□□□ -2
H2afb1S4R1E0 Gm28650-201ENSMUST00000188413 411 ntBASIC2.55□□□□□ -2
H2afb1S4R1E0 Gm28779-201ENSMUST00000189678 323 ntBASIC2.55□□□□□ -2
H2afb1S4R1E0 Gm17916-203ENSMUST00000189918 324 ntTSL 5 BASIC2.55□□□□□ -2
H2afb1S4R1E0 Gm28314-201ENSMUST00000191276 345 ntBASIC2.55□□□□□ -2
H2afb1S4R1E0 Topbp1-ps2-201ENSMUST00000191289 189 ntBASIC2.55□□□□□ -2
H2afb1S4R1E0 Gm38382-201ENSMUST00000193790 2499 ntBASIC2.55□□□□□ -2
H2afb1S4R1E0 Gm43405-201ENSMUST00000198642 337 ntBASIC2.55□□□□□ -2
H2afb1S4R1E0 Gm43505-201ENSMUST00000200579 139 ntBASIC2.55□□□□□ -2
H2afb1S4R1E0 Gm44594-201ENSMUST00000208982 407 ntBASIC2.55□□□□□ -2
H2afb1S4R1E0 Gm44555-201ENSMUST00000209008 148 ntBASIC2.55□□□□□ -2
H2afb1S4R1E0 Olfr662-ps1-201ENSMUST00000210704 396 ntBASIC2.55□□□□□ -2
H2afb1S4R1E0 Gm19572-201ENSMUST00000214326 338 ntBASIC2.55□□□□□ -2
H2afb1S4R1E0 AC116589.4-201ENSMUST00000222390 216 ntBASIC2.55□□□□□ -2
H2afb1S4R1E0 Gm20102-201ENSMUST00000222445 220 ntBASIC2.55□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 80.3 ms