Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Olfr165-201ENSMUST00000052516 1040 ntAPPRIS ALT1 BASIC1.34□□□□□ -2.2
Scn8aQ9WTU3 Snora33-201ENSMUST00000093556 129 ntBASIC1.34□□□□□ -2.2
Scn8aQ9WTU3 Gm22960-201ENSMUST00000122517 104 ntBASIC1.33□□□□□ -2.2
Scn8aQ9WTU3 Gm14978-201ENSMUST00000129000 304 ntTSL 3 BASIC1.33□□□□□ -2.2
Scn8aQ9WTU3 Gm22769-201ENSMUST00000158367 98 ntBASIC1.33□□□□□ -2.2
Scn8aQ9WTU3 Gm23473-201ENSMUST00000158883 116 ntBASIC1.33□□□□□ -2.2
Scn8aQ9WTU3 Spink14-202ENSMUST00000162265 542 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
Scn8aQ9WTU3 Gm17521-201ENSMUST00000165345 468 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
Scn8aQ9WTU3 Gm24154-201ENSMUST00000175261 130 ntBASIC1.33□□□□□ -2.2
Scn8aQ9WTU3 Gm26960-201ENSMUST00000182263 412 ntBASIC1.33□□□□□ -2.2
Scn8aQ9WTU3 Gm43729-201ENSMUST00000196949 499 ntTSL 3 BASIC1.33□□□□□ -2.2
Scn8aQ9WTU3 Gm44483-201ENSMUST00000197203 97 ntBASIC1.33□□□□□ -2.2
Scn8aQ9WTU3 A730009L09Rik-202ENSMUST00000210306 201 ntAPPRIS ALT2 TSL 5 BASIC1.33□□□□□ -2.2
Scn8aQ9WTU3 Olfr848-ps1-201ENSMUST00000212241 930 ntBASIC1.33□□□□□ -2.2
Scn8aQ9WTU3 Lilr4b-211ENSMUST00000219661 1143 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
Scn8aQ9WTU3 AC122887.2-201ENSMUST00000219465 1603 ntBASIC1.33□□□□□ -2.2
Scn8aQ9WTU3 Igkv13-87-201ENSMUST00000114214 286 ntBASIC1.32□□□□□ -2.2
Scn8aQ9WTU3 Mup-ps15-201ENSMUST00000121741 539 ntBASIC1.32□□□□□ -2.2
Scn8aQ9WTU3 4933406D12Rik-201ENSMUST00000147212 737 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
Scn8aQ9WTU3 Gm37576-201ENSMUST00000194228 372 ntBASIC1.32□□□□□ -2.2
Scn8aQ9WTU3 Igkv13-64-201ENSMUST00000198143 343 ntBASIC1.32□□□□□ -2.2
Scn8aQ9WTU3 Mir7215-201ENSMUST00000200383 51 ntBASIC1.32□□□□□ -2.2
Scn8aQ9WTU3 Gm45530-201ENSMUST00000211658 225 ntBASIC1.32□□□□□ -2.2
Scn8aQ9WTU3 AC154264.1-201ENSMUST00000216064 386 ntTSL 5 BASIC1.32□□□□□ -2.2
Scn8aQ9WTU3 AC122901.2-201ENSMUST00000216926 285 ntBASIC1.32□□□□□ -2.2
Scn8aQ9WTU3 AC153646.1-201ENSMUST00000223229 1279 ntBASIC1.32□□□□□ -2.2
Scn8aQ9WTU3 Gm25409-201ENSMUST00000083764 131 ntBASIC1.32□□□□□ -2.2
Scn8aQ9WTU3 Olfr1228-203ENSMUST00000216392 2145 ntAPPRIS ALT2 TSL 5 BASIC1.32□□□□□ -2.2
Scn8aQ9WTU3 Gm7173-202ENSMUST00000114021 1083 ntAPPRIS ALT2 TSL 5 BASIC1.32□□□□□ -2.2
Scn8aQ9WTU3 Rhox11-ps1-201ENSMUST00000121945 387 ntBASIC1.32□□□□□ -2.2
Scn8aQ9WTU3 Gm25624-201ENSMUST00000157222 275 ntBASIC1.32□□□□□ -2.2
Scn8aQ9WTU3 Gm23559-201ENSMUST00000157824 103 ntBASIC1.32□□□□□ -2.2
Scn8aQ9WTU3 Gm16004-201ENSMUST00000161981 311 ntTSL 5 BASIC1.32□□□□□ -2.2
Scn8aQ9WTU3 Gm1553-201ENSMUST00000177934 658 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
Scn8aQ9WTU3 4930598A11Rik-201ENSMUST00000180742 628 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
Scn8aQ9WTU3 Obox4-ps2-201ENSMUST00000185088 442 ntBASIC1.32□□□□□ -2.2
Scn8aQ9WTU3 Scgb2b14-ps-201ENSMUST00000189424 336 ntBASIC1.32□□□□□ -2.2
Scn8aQ9WTU3 Gm33354-201ENSMUST00000195448 906 ntBASIC1.32□□□□□ -2.2
Scn8aQ9WTU3 Gm43978-201ENSMUST00000203491 451 ntBASIC1.32□□□□□ -2.2
Scn8aQ9WTU3 2010106E10Rik-201ENSMUST00000026602 1257 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
Scn8aQ9WTU3 Olfr1453-201ENSMUST00000087773 924 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
Scn8aQ9WTU3 Gm44708-201ENSMUST00000205580 2237 ntBASIC1.31□□□□□ -2.2
Scn8aQ9WTU3 Olfr379-ps1-201ENSMUST00000117349 934 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
Scn8aQ9WTU3 Gm6954-201ENSMUST00000117416 225 ntBASIC1.31□□□□□ -2.2
Scn8aQ9WTU3 Gm22483-201ENSMUST00000157986 274 ntBASIC1.31□□□□□ -2.2
Scn8aQ9WTU3 Gm17113-201ENSMUST00000170118 171 ntBASIC1.31□□□□□ -2.2
Scn8aQ9WTU3 Mir1954-201ENSMUST00000175595 86 ntBASIC1.31□□□□□ -2.2
Scn8aQ9WTU3 Gm44300-201ENSMUST00000196792 121 ntBASIC1.31□□□□□ -2.2
Scn8aQ9WTU3 Gm8041-201ENSMUST00000199755 616 ntBASIC1.31□□□□□ -2.2
Scn8aQ9WTU3 Gm43659-201ENSMUST00000200894 628 ntBASIC1.31□□□□□ -2.2
Scn8aQ9WTU3 Olfr1488-ps1-201ENSMUST00000207436 136 ntBASIC1.31□□□□□ -2.2
Scn8aQ9WTU3 Gm46193-201ENSMUST00000219399 364 ntBASIC1.31□□□□□ -2.2
Scn8aQ9WTU3 Gm19326-201ENSMUST00000219818 326 ntBASIC1.31□□□□□ -2.2
Scn8aQ9WTU3 AC157494.1-201ENSMUST00000221127 549 ntTSL 5 BASIC1.31□□□□□ -2.2
Scn8aQ9WTU3 Gm37941-201ENSMUST00000192170 2309 ntBASIC1.31□□□□□ -2.2
Scn8aQ9WTU3 Gm18360-201ENSMUST00000173327 1524 ntBASIC1.31□□□□□ -2.2
Scn8aQ9WTU3 Olfr1222-203ENSMUST00000215816 3796 ntAPPRIS P1 TSL 5 BASIC1.31□□□□□ -2.2
Scn8aQ9WTU3 Olfr1487-203ENSMUST00000209005 2061 ntTSL 3 BASIC1.31□□□□□ -2.2
Scn8aQ9WTU3 Gm42968-201ENSMUST00000198578 1372 ntBASIC1.3□□□□□ -2.2
Scn8aQ9WTU3 Gm13457-201ENSMUST00000117885 267 ntBASIC1.3□□□□□ -2.2
Scn8aQ9WTU3 Gm14918-201ENSMUST00000118153 268 ntBASIC1.3□□□□□ -2.2
Scn8aQ9WTU3 Gm24902-201ENSMUST00000158126 123 ntBASIC1.3□□□□□ -2.2
Scn8aQ9WTU3 Vmn1r-ps10-201ENSMUST00000176165 889 ntBASIC1.3□□□□□ -2.2
Scn8aQ9WTU3 Gm22776-201ENSMUST00000178634 94 ntBASIC1.3□□□□□ -2.2
Scn8aQ9WTU3 Gm23767-201ENSMUST00000179278 94 ntBASIC1.3□□□□□ -2.2
Scn8aQ9WTU3 Gm29277-201ENSMUST00000185226 602 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
Scn8aQ9WTU3 Gm29089-201ENSMUST00000186209 602 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
Scn8aQ9WTU3 Trav12-4-201ENSMUST00000200663 271 ntBASIC1.3□□□□□ -2.2
Scn8aQ9WTU3 Gm42960-201ENSMUST00000202160 241 ntBASIC1.3□□□□□ -2.2
Scn8aQ9WTU3 Gm5317-201ENSMUST00000204445 847 ntBASIC1.3□□□□□ -2.2
Scn8aQ9WTU3 Gm44794-201ENSMUST00000206550 411 ntBASIC1.3□□□□□ -2.2
Scn8aQ9WTU3 Gm45173-201ENSMUST00000206819 305 ntBASIC1.3□□□□□ -2.2
Scn8aQ9WTU3 AC151843.1-201ENSMUST00000215960 691 ntBASIC1.3□□□□□ -2.2
Scn8aQ9WTU3 AC123803.1-201ENSMUST00000216093 189 ntBASIC1.3□□□□□ -2.2
Scn8aQ9WTU3 CT025552.1-201ENSMUST00000224561 521 ntBASIC1.3□□□□□ -2.2
Scn8aQ9WTU3 Zfp972-201ENSMUST00000081529 472 ntAPPRIS P1 TSL 5 BASIC1.3□□□□□ -2.2
Scn8aQ9WTU3 Vmn2r-ps83-201ENSMUST00000173787 2368 ntBASIC1.3□□□□□ -2.2
Scn8aQ9WTU3 Gm43960-201ENSMUST00000204249 5020 ntBASIC1.3□□□□□ -2.2
Scn8aQ9WTU3 Olfr1318-202ENSMUST00000214063 3556 ntAPPRIS P1 TSL 5 BASIC1.3□□□□□ -2.2
Scn8aQ9WTU3 Gm24049-201ENSMUST00000102409 100 ntBASIC1.3□□□□□ -2.2
Scn8aQ9WTU3 Gm22780-201ENSMUST00000104084 132 ntBASIC1.3□□□□□ -2.2
Scn8aQ9WTU3 4933413L06Rik-201ENSMUST00000110292 809 ntTSL 2 BASIC1.3□□□□□ -2.2
Scn8aQ9WTU3 Gm8217-201ENSMUST00000119136 465 ntBASIC1.3□□□□□ -2.2
Scn8aQ9WTU3 Gm14748-201ENSMUST00000119819 411 ntBASIC1.3□□□□□ -2.2
Scn8aQ9WTU3 Gm11556-201ENSMUST00000120751 288 ntBASIC1.3□□□□□ -2.2
Scn8aQ9WTU3 Gm14366-201ENSMUST00000121970 730 ntBASIC1.3□□□□□ -2.2
Scn8aQ9WTU3 Gm16359-201ENSMUST00000124511 289 ntBASIC1.3□□□□□ -2.2
Scn8aQ9WTU3 Gm22037-201ENSMUST00000157280 296 ntBASIC1.3□□□□□ -2.2
Scn8aQ9WTU3 Gm9071-201ENSMUST00000165915 474 ntBASIC1.3□□□□□ -2.2
Scn8aQ9WTU3 Gm18415-201ENSMUST00000177464 647 ntBASIC1.3□□□□□ -2.2
Scn8aQ9WTU3 Gm26713-201ENSMUST00000181827 627 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
Scn8aQ9WTU3 Gm20058-201ENSMUST00000186939 284 ntBASIC1.3□□□□□ -2.2
Scn8aQ9WTU3 Gm38006-201ENSMUST00000192421 697 ntTSL 5 BASIC1.3□□□□□ -2.2
Scn8aQ9WTU3 Vamp4-208ENSMUST00000194810 600 ntTSL 5 BASIC1.3□□□□□ -2.2
Scn8aQ9WTU3 Gm7871-201ENSMUST00000195346 618 ntBASIC1.3□□□□□ -2.2
Scn8aQ9WTU3 Olfr1556-ps1-201ENSMUST00000204688 466 ntBASIC1.3□□□□□ -2.2
Scn8aQ9WTU3 Gm19140-201ENSMUST00000209790 421 ntBASIC1.3□□□□□ -2.2
Scn8aQ9WTU3 AC163289.1-201ENSMUST00000215919 262 ntBASIC1.3□□□□□ -2.2
Scn8aQ9WTU3 Gm18188-201ENSMUST00000219386 478 ntBASIC1.3□□□□□ -2.2
Scn8aQ9WTU3 AC158803.1-201ENSMUST00000219495 316 ntBASIC1.3□□□□□ -2.2
Retrieved 100 of 76,532 protein–RNA pairs in 107.1 ms