Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Gm25361-201ENSMUST00000179358 76 ntBASIC2.02□□□□□ -2.09
Trem1Q9JKE2 Gtpbp4-ps2-201ENSMUST00000184058 256 ntBASIC2.02□□□□□ -2.09
Trem1Q9JKE2 Trav6d-3-202ENSMUST00000184883 308 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
Trem1Q9JKE2 Gm28494-201ENSMUST00000187687 562 ntTSL 5 BASIC2.02□□□□□ -2.09
Trem1Q9JKE2 Traj57-202ENSMUST00000196977 63 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
Trem1Q9JKE2 Gm34314-201ENSMUST00000203622 367 ntBASIC2.02□□□□□ -2.09
Trem1Q9JKE2 AC159476.2-201ENSMUST00000216221 418 ntBASIC2.02□□□□□ -2.09
Trem1Q9JKE2 AC134577.1-201ENSMUST00000227572 295 ntBASIC2.02□□□□□ -2.09
Trem1Q9JKE2 Gm23517-201ENSMUST00000082830 192 ntBASIC2.02□□□□□ -2.09
Trem1Q9JKE2 Tlr8-201ENSMUST00000049023 3158 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
Trem1Q9JKE2 Olfr801-203ENSMUST00000213294 4045 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
Trem1Q9JKE2 AC134917.1-201ENSMUST00000220517 1449 ntBASIC2.01□□□□□ -2.09
Trem1Q9JKE2 Ighv3-6-201ENSMUST00000103481 342 ntAPPRIS ALT2 BASIC2.01□□□□□ -2.09
Trem1Q9JKE2 Gm12819-201ENSMUST00000122223 629 ntBASIC2.01□□□□□ -2.09
Trem1Q9JKE2 Gm14426-201ENSMUST00000128562 249 ntTSL 3 BASIC2.01□□□□□ -2.09
Trem1Q9JKE2 Gm28039-201ENSMUST00000149128 254 ntTSL 3 BASIC2.01□□□□□ -2.09
Trem1Q9JKE2 Gm24212-201ENSMUST00000158258 132 ntBASIC2.01□□□□□ -2.09
Trem1Q9JKE2 Vmn1r-ps57-201ENSMUST00000174879 288 ntBASIC2.01□□□□□ -2.09
Trem1Q9JKE2 Gm38146-201ENSMUST00000194121 1293 ntBASIC2.01□□□□□ -2.09
Trem1Q9JKE2 Gm43729-201ENSMUST00000196949 499 ntTSL 3 BASIC2.01□□□□□ -2.09
Trem1Q9JKE2 Gm42672-201ENSMUST00000197821 352 ntBASIC2.01□□□□□ -2.09
Trem1Q9JKE2 Gm18691-201ENSMUST00000203593 872 ntBASIC2.01□□□□□ -2.09
Trem1Q9JKE2 Gm43865-201ENSMUST00000204721 127 ntBASIC2.01□□□□□ -2.09
Trem1Q9JKE2 Gm2511-201ENSMUST00000205521 457 ntTSL 3 BASIC2.01□□□□□ -2.09
Trem1Q9JKE2 Olfr1285-201ENSMUST00000208523 903 ntBASIC2.01□□□□□ -2.09
Trem1Q9JKE2 AC153957.1-201ENSMUST00000215235 229 ntBASIC2.01□□□□□ -2.09
Trem1Q9JKE2 Gm25788-201ENSMUST00000082721 131 ntBASIC2.01□□□□□ -2.09
Trem1Q9JKE2 Gm42536-201ENSMUST00000197562 1613 ntBASIC2.01□□□□□ -2.09
Trem1Q9JKE2 Olfr1105-202ENSMUST00000215978 3012 ntAPPRIS P1 TSL 3 BASIC2.01□□□□□ -2.09
Trem1Q9JKE2 Olfr1018-202ENSMUST00000214416 3186 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
Trem1Q9JKE2 Gm44527-201ENSMUST00000182210 2945 ntTSL 2 BASIC2□□□□□ -2.09
Trem1Q9JKE2 Gm24907-201ENSMUST00000116932 128 ntBASIC2□□□□□ -2.09
Trem1Q9JKE2 Gm14973-201ENSMUST00000117248 255 ntBASIC2□□□□□ -2.09
Trem1Q9JKE2 Gm13502-201ENSMUST00000121574 684 ntBASIC2□□□□□ -2.09
Trem1Q9JKE2 Gm23752-201ENSMUST00000157584 115 ntBASIC2□□□□□ -2.09
Trem1Q9JKE2 Gm23068-201ENSMUST00000158239 293 ntBASIC2□□□□□ -2.09
Trem1Q9JKE2 Gm7568-203ENSMUST00000161626 415 ntTSL 3 BASIC2□□□□□ -2.09
Trem1Q9JKE2 Gm24897-201ENSMUST00000179033 107 ntBASIC2□□□□□ -2.09
Trem1Q9JKE2 Gm24306-201ENSMUST00000180229 79 ntBASIC2□□□□□ -2.09
Trem1Q9JKE2 C920009B18Rik-204ENSMUST00000181733 123 ntBASIC2□□□□□ -2.09
Trem1Q9JKE2 Rpl23a-ps10-201ENSMUST00000185511 462 ntBASIC2□□□□□ -2.09
Trem1Q9JKE2 Gm20837-202ENSMUST00000190558 844 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
Trem1Q9JKE2 Gm36984-201ENSMUST00000192770 235 ntBASIC2□□□□□ -2.09
Trem1Q9JKE2 Mir9-1-201ENSMUST00000199907 89 ntBASIC2□□□□□ -2.09
Trem1Q9JKE2 Gm34411-201ENSMUST00000201180 280 ntTSL 3 BASIC2□□□□□ -2.09
Trem1Q9JKE2 Gm43264-201ENSMUST00000202284 325 ntBASIC2□□□□□ -2.09
Trem1Q9JKE2 Olfr941-ps1-201ENSMUST00000215258 935 ntBASIC2□□□□□ -2.09
Trem1Q9JKE2 Rpl26-ps6-201ENSMUST00000216693 434 ntBASIC2□□□□□ -2.09
Trem1Q9JKE2 Snord14d-201ENSMUST00000083424 86 ntBASIC2□□□□□ -2.09
Trem1Q9JKE2 Vmn2r70-201ENSMUST00000168230 2565 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
Trem1Q9JKE2 Vmn2r69-201ENSMUST00000171213 2553 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
Trem1Q9JKE2 Igkv17-127-201ENSMUST00000103309 341 ntAPPRIS ALT2 BASIC1.99□□□□□ -2.09
Trem1Q9JKE2 Gm25539-201ENSMUST00000116886 122 ntBASIC1.99□□□□□ -2.09
Trem1Q9JKE2 Gm12787-201ENSMUST00000119234 396 ntBASIC1.99□□□□□ -2.09
Trem1Q9JKE2 Defa-ps13-201ENSMUST00000120695 204 ntBASIC1.99□□□□□ -2.09
Trem1Q9JKE2 Gm11438-201ENSMUST00000121582 189 ntBASIC1.99□□□□□ -2.09
Trem1Q9JKE2 Gm15878-201ENSMUST00000127561 306 ntBASIC1.99□□□□□ -2.09
Trem1Q9JKE2 Gm13200-201ENSMUST00000138802 258 ntTSL 3 BASIC1.99□□□□□ -2.09
Trem1Q9JKE2 Mir1942-201ENSMUST00000157274 63 ntBASIC1.99□□□□□ -2.09
Trem1Q9JKE2 Gm16326-201ENSMUST00000162843 414 ntBASIC1.99□□□□□ -2.09
Trem1Q9JKE2 Gm16588-201ENSMUST00000162889 355 ntBASIC1.99□□□□□ -2.09
Trem1Q9JKE2 Mir5112-201ENSMUST00000174897 60 ntBASIC1.99□□□□□ -2.09
Trem1Q9JKE2 Gm23268-201ENSMUST00000175494 78 ntBASIC1.99□□□□□ -2.09
Trem1Q9JKE2 Gm22290-201ENSMUST00000177655 107 ntBASIC1.99□□□□□ -2.09
Trem1Q9JKE2 Gm22583-201ENSMUST00000178031 107 ntBASIC1.99□□□□□ -2.09
Trem1Q9JKE2 Gm29216-201ENSMUST00000187117 492 ntBASIC1.99□□□□□ -2.09
Trem1Q9JKE2 Gm2719-201ENSMUST00000191929 444 ntBASIC1.99□□□□□ -2.09
Trem1Q9JKE2 Rpl18a-ps3-201ENSMUST00000198938 171 ntBASIC1.99□□□□□ -2.09
Trem1Q9JKE2 Gm44161-201ENSMUST00000203532 253 ntBASIC1.99□□□□□ -2.09
Trem1Q9JKE2 Olfr1470-ps1-201ENSMUST00000208620 949 ntBASIC1.99□□□□□ -2.09
Trem1Q9JKE2 Gm45459-201ENSMUST00000209882 442 ntTSL 5 BASIC1.99□□□□□ -2.09
Trem1Q9JKE2 Gm45452-201ENSMUST00000210905 177 ntBASIC1.99□□□□□ -2.09
Trem1Q9JKE2 Defa-ps13-202ENSMUST00000212360 204 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
Trem1Q9JKE2 AC069561.2-201ENSMUST00000217596 420 ntBASIC1.99□□□□□ -2.09
Trem1Q9JKE2 Gm30239-202ENSMUST00000223193 631 ntTSL 5 BASIC1.99□□□□□ -2.09
Trem1Q9JKE2 CT030704.1-201ENSMUST00000227521 699 ntBASIC1.99□□□□□ -2.09
Trem1Q9JKE2 Gm24707-201ENSMUST00000082812 107 ntBASIC1.99□□□□□ -2.09
Trem1Q9JKE2 Mir452-201ENSMUST00000093629 85 ntBASIC1.99□□□□□ -2.09
Trem1Q9JKE2 Gm3055-202ENSMUST00000218939 4067 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
Trem1Q9JKE2 Zfp781-202ENSMUST00000219144 4067 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
Trem1Q9JKE2 Olfr934-202ENSMUST00000214324 2462 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
Trem1Q9JKE2 Vmn1r185-210ENSMUST00000228367 6982 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
Trem1Q9JKE2 Gm22023-201ENSMUST00000104354 130 ntBASIC1.98□□□□□ -2.09
Trem1Q9JKE2 Vmn1r121-201ENSMUST00000105197 945 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
Trem1Q9JKE2 Gm14881-201ENSMUST00000120366 372 ntBASIC1.98□□□□□ -2.09
Trem1Q9JKE2 Gm7327-201ENSMUST00000120925 652 ntBASIC1.98□□□□□ -2.09
Trem1Q9JKE2 Zfp965-204ENSMUST00000143490 297 ntTSL 5 BASIC1.98□□□□□ -2.09
Trem1Q9JKE2 Gm25113-201ENSMUST00000157185 143 ntBASIC1.98□□□□□ -2.09
Trem1Q9JKE2 Gm23713-201ENSMUST00000157353 70 ntBASIC1.98□□□□□ -2.09
Trem1Q9JKE2 Gm22615-201ENSMUST00000158102 70 ntBASIC1.98□□□□□ -2.09
Trem1Q9JKE2 Gm22389-201ENSMUST00000158193 301 ntBASIC1.98□□□□□ -2.09
Trem1Q9JKE2 Sumo1-203ENSMUST00000185265 532 ntTSL 3 BASIC1.98□□□□□ -2.09
Trem1Q9JKE2 Gm30484-201ENSMUST00000200327 449 ntTSL 5 BASIC1.98□□□□□ -2.09
Trem1Q9JKE2 Gm44012-201ENSMUST00000204154 424 ntTSL 3 BASIC1.98□□□□□ -2.09
Trem1Q9JKE2 4930431P19Rik-201ENSMUST00000207570 451 ntBASIC1.98□□□□□ -2.09
Trem1Q9JKE2 AC130222.1-201ENSMUST00000221198 256 ntBASIC1.98□□□□□ -2.09
Trem1Q9JKE2 AC158521.1-201ENSMUST00000225295 660 ntBASIC1.98□□□□□ -2.09
Trem1Q9JKE2 Olfr769-201ENSMUST00000050915 1084 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
Trem1Q9JKE2 Olfr497-201ENSMUST00000076406 945 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
Trem1Q9JKE2 Gm23615-201ENSMUST00000082602 65 ntBASIC1.98□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 80.2 ms