Protein–RNA interactions for Protein: Q9JKE1

Trem3, TREM-3, mousemouse

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem3Q9JKE1 Gm35843-201ENSMUST00000193716 666 ntBASIC1.29□□□□□ -2.2
Trem3Q9JKE1 Gm36728-201ENSMUST00000195782 665 ntBASIC1.29□□□□□ -2.2
Trem3Q9JKE1 Snord43-201ENSMUST00000199549 108 ntBASIC1.29□□□□□ -2.2
Trem3Q9JKE1 Gm43894-201ENSMUST00000203274 688 ntBASIC1.29□□□□□ -2.2
Trem3Q9JKE1 Gm39469-201ENSMUST00000214845 461 ntTSL 2 BASIC1.29□□□□□ -2.2
Trem3Q9JKE1 Gm18729-201ENSMUST00000217230 621 ntBASIC1.29□□□□□ -2.2
Trem3Q9JKE1 Gm36989-201ENSMUST00000193225 2160 ntBASIC1.28□□□□□ -2.2
Trem3Q9JKE1 Gm42635-201ENSMUST00000200266 2571 ntBASIC1.28□□□□□ -2.2
Trem3Q9JKE1 Gm14594-201ENSMUST00000118052 537 ntBASIC1.28□□□□□ -2.2
Trem3Q9JKE1 Gm12889-201ENSMUST00000118684 241 ntBASIC1.28□□□□□ -2.2
Trem3Q9JKE1 Gm14590-201ENSMUST00000118934 537 ntBASIC1.28□□□□□ -2.2
Trem3Q9JKE1 Gm11785-201ENSMUST00000120165 601 ntBASIC1.28□□□□□ -2.2
Trem3Q9JKE1 n-R5s159-201ENSMUST00000122681 120 ntBASIC1.28□□□□□ -2.2
Trem3Q9JKE1 Gm15445-201ENSMUST00000146700 603 ntTSL 5 BASIC1.28□□□□□ -2.2
Trem3Q9JKE1 Gm24174-201ENSMUST00000158933 111 ntBASIC1.28□□□□□ -2.2
Trem3Q9JKE1 Gm8207-201ENSMUST00000171204 502 ntBASIC1.28□□□□□ -2.2
Trem3Q9JKE1 Gm17631-201ENSMUST00000171980 69 ntAPPRIS P1 TSL 5 BASIC1.28□□□□□ -2.2
Trem3Q9JKE1 Gm14596-201ENSMUST00000180268 537 ntBASIC1.28□□□□□ -2.2
Trem3Q9JKE1 Gm14595-201ENSMUST00000180335 537 ntBASIC1.28□□□□□ -2.2
Trem3Q9JKE1 Gm27265-201ENSMUST00000183559 77 ntBASIC1.28□□□□□ -2.2
Trem3Q9JKE1 Ranbp2-ps8-201ENSMUST00000183723 345 ntBASIC1.28□□□□□ -2.2
Trem3Q9JKE1 Sult2a6-202ENSMUST00000184731 664 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
Trem3Q9JKE1 Gm29513-201ENSMUST00000185741 202 ntBASIC1.28□□□□□ -2.2
Trem3Q9JKE1 Gm29648-201ENSMUST00000188651 650 ntTSL 5 BASIC1.28□□□□□ -2.2
Trem3Q9JKE1 Gm42976-201ENSMUST00000200313 222 ntBASIC1.28□□□□□ -2.2
Trem3Q9JKE1 Vmn1r-ps5-201ENSMUST00000202963 931 ntBASIC1.28□□□□□ -2.2
Trem3Q9JKE1 Gm43955-201ENSMUST00000204332 142 ntBASIC1.28□□□□□ -2.2
Trem3Q9JKE1 A530053G22Rik-204ENSMUST00000204579 536 ntTSL 2 BASIC1.28□□□□□ -2.2
Trem3Q9JKE1 Fam24a-202ENSMUST00000207439 711 ntAPPRIS P1 TSL 5 BASIC1.28□□□□□ -2.2
Trem3Q9JKE1 AC131068.1-201ENSMUST00000226891 482 ntBASIC1.28□□□□□ -2.2
Trem3Q9JKE1 AC109172.1-201ENSMUST00000227503 187 ntBASIC1.28□□□□□ -2.2
Trem3Q9JKE1 Stfa2-201ENSMUST00000023619 423 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
Trem3Q9JKE1 Tas2r117-201ENSMUST00000068302 1158 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
Trem3Q9JKE1 Vmn1r229-201ENSMUST00000076759 921 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
Trem3Q9JKE1 Mir151-201ENSMUST00000083678 68 ntBASIC1.28□□□□□ -2.2
Trem3Q9JKE1 Olfr1086-201ENSMUST00000099878 933 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
Trem3Q9JKE1 Gm19541-201ENSMUST00000184488 2868 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
Trem3Q9JKE1 Gm27013-202ENSMUST00000205067 1436 ntBASIC1.27□□□□□ -2.21
Trem3Q9JKE1 Gm26396-201ENSMUST00000104093 132 ntBASIC1.27□□□□□ -2.21
Trem3Q9JKE1 Gm15526-201ENSMUST00000112504 204 ntBASIC1.27□□□□□ -2.21
Trem3Q9JKE1 Gm14774-201ENSMUST00000117857 536 ntBASIC1.27□□□□□ -2.21
Trem3Q9JKE1 Gm11352-201ENSMUST00000119264 517 ntBASIC1.27□□□□□ -2.21
Trem3Q9JKE1 Atp5k-ps2-201ENSMUST00000120437 210 ntBASIC1.27□□□□□ -2.21
Trem3Q9JKE1 Gm15130-201ENSMUST00000132464 663 ntAPPRIS P1 TSL 3 BASIC1.27□□□□□ -2.21
Trem3Q9JKE1 Gm13661-201ENSMUST00000154297 318 ntTSL 3 BASIC1.27□□□□□ -2.21
Trem3Q9JKE1 Gm23718-201ENSMUST00000157350 307 ntBASIC1.27□□□□□ -2.21
Trem3Q9JKE1 Mir1949-201ENSMUST00000157434 141 ntBASIC1.27□□□□□ -2.21
Trem3Q9JKE1 Gm25220-201ENSMUST00000157546 95 ntBASIC1.27□□□□□ -2.21
Trem3Q9JKE1 Gm26181-201ENSMUST00000157687 106 ntBASIC1.27□□□□□ -2.21
Trem3Q9JKE1 Gm26157-201ENSMUST00000158974 126 ntBASIC1.27□□□□□ -2.21
Trem3Q9JKE1 Gm7592-201ENSMUST00000160674 627 ntBASIC1.27□□□□□ -2.21
Trem3Q9JKE1 Gm20415-201ENSMUST00000172877 423 ntBASIC1.27□□□□□ -2.21
Trem3Q9JKE1 Vmn2r-ps70-201ENSMUST00000174636 302 ntBASIC1.27□□□□□ -2.21
Trem3Q9JKE1 Vmn2r-ps33-201ENSMUST00000175691 904 ntBASIC1.27□□□□□ -2.21
Trem3Q9JKE1 Gtpbp4-ps2-201ENSMUST00000184058 256 ntBASIC1.27□□□□□ -2.21
Trem3Q9JKE1 Mir7081-201ENSMUST00000184490 75 ntBASIC1.27□□□□□ -2.21
Trem3Q9JKE1 Gm21409-201ENSMUST00000186110 923 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
Trem3Q9JKE1 Igkv13-76-201ENSMUST00000197621 347 ntBASIC1.27□□□□□ -2.21
Trem3Q9JKE1 Gm43659-201ENSMUST00000200894 628 ntBASIC1.27□□□□□ -2.21
Trem3Q9JKE1 Gm19649-201ENSMUST00000201126 822 ntBASIC1.27□□□□□ -2.21
Trem3Q9JKE1 Gm44962-201ENSMUST00000206460 279 ntBASIC1.27□□□□□ -2.21
Trem3Q9JKE1 Olfr941-ps1-201ENSMUST00000215258 935 ntBASIC1.27□□□□□ -2.21
Trem3Q9JKE1 AC147633.1-201ENSMUST00000225134 259 ntBASIC1.27□□□□□ -2.21
Trem3Q9JKE1 AC101945.1-201ENSMUST00000226734 466 ntBASIC1.27□□□□□ -2.21
Trem3Q9JKE1 Olfr385-201ENSMUST00000071553 939 ntAPPRIS P1 BASIC1.27□□□□□ -2.21
Trem3Q9JKE1 Gm22247-201ENSMUST00000082476 131 ntBASIC1.27□□□□□ -2.21
Trem3Q9JKE1 Mir322-201ENSMUST00000083484 95 ntBASIC1.27□□□□□ -2.21
Trem3Q9JKE1 Gm19194-201ENSMUST00000192015 3774 ntBASIC1.27□□□□□ -2.21
Trem3Q9JKE1 Gm42770-201ENSMUST00000199657 4155 ntBASIC1.26□□□□□ -2.21
Trem3Q9JKE1 AL645643.1-201ENSMUST00000222438 3897 ntBASIC1.26□□□□□ -2.21
Trem3Q9JKE1 Gm14674-201ENSMUST00000117816 342 ntBASIC1.26□□□□□ -2.21
Trem3Q9JKE1 Gm14358-201ENSMUST00000118458 403 ntBASIC1.26□□□□□ -2.21
Trem3Q9JKE1 Gm12550-201ENSMUST00000118478 329 ntBASIC1.26□□□□□ -2.21
Trem3Q9JKE1 Scgb2b22-ps-201ENSMUST00000121947 340 ntBASIC1.26□□□□□ -2.21
Trem3Q9JKE1 4933406D12Rik-201ENSMUST00000147212 737 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
Trem3Q9JKE1 Gm23172-201ENSMUST00000157160 124 ntBASIC1.26□□□□□ -2.21
Trem3Q9JKE1 Gm23332-201ENSMUST00000157424 275 ntBASIC1.26□□□□□ -2.21
Trem3Q9JKE1 Gm4468-201ENSMUST00000170206 294 ntBASIC1.26□□□□□ -2.21
Trem3Q9JKE1 Gm26189-201ENSMUST00000179879 107 ntBASIC1.26□□□□□ -2.21
Trem3Q9JKE1 Gm26779-201ENSMUST00000181101 551 ntTSL 2 BASIC1.26□□□□□ -2.21
Trem3Q9JKE1 Gtpbp4-ps1-201ENSMUST00000184732 249 ntBASIC1.26□□□□□ -2.21
Trem3Q9JKE1 1700015G11Rik-203ENSMUST00000185841 305 ntAPPRIS ALT2 TSL 5 BASIC1.26□□□□□ -2.21
Trem3Q9JKE1 Gm29288-201ENSMUST00000191582 901 ntBASIC1.26□□□□□ -2.21
Trem3Q9JKE1 Gm37743-201ENSMUST00000194645 376 ntBASIC1.26□□□□□ -2.21
Trem3Q9JKE1 Gm33866-201ENSMUST00000196911 289 ntBASIC1.26□□□□□ -2.21
Trem3Q9JKE1 Gm43228-201ENSMUST00000200735 264 ntBASIC1.26□□□□□ -2.21
Trem3Q9JKE1 Gm44024-201ENSMUST00000203008 476 ntBASIC1.26□□□□□ -2.21
Trem3Q9JKE1 Gm44050-201ENSMUST00000204263 527 ntBASIC1.26□□□□□ -2.21
Trem3Q9JKE1 AC154552.5-201ENSMUST00000222352 207 ntBASIC1.26□□□□□ -2.21
Trem3Q9JKE1 CT030238.4-201ENSMUST00000228579 801 ntBASIC1.26□□□□□ -2.21
Trem3Q9JKE1 Pdcd10-201ENSMUST00000029424 907 ntTSL 5 BASIC1.26□□□□□ -2.21
Trem3Q9JKE1 Hmgb1l-201ENSMUST00000082150 571 ntBASIC1.26□□□□□ -2.21
Trem3Q9JKE1 Gm22443-201ENSMUST00000082890 107 ntBASIC1.26□□□□□ -2.21
Trem3Q9JKE1 Gm26126-201ENSMUST00000083188 164 ntBASIC1.26□□□□□ -2.21
Trem3Q9JKE1 Olfr1208-202ENSMUST00000214121 2823 ntAPPRIS P1 TSL 3 BASIC1.25□□□□□ -2.21
Trem3Q9JKE1 Trbv3-201ENSMUST00000103264 455 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
Trem3Q9JKE1 Gm12393-201ENSMUST00000117084 848 ntBASIC1.25□□□□□ -2.21
Trem3Q9JKE1 Gm12814-201ENSMUST00000117091 846 ntBASIC1.25□□□□□ -2.21
Trem3Q9JKE1 Gm14128-201ENSMUST00000119514 1011 ntBASIC1.25□□□□□ -2.21
Trem3Q9JKE1 Rpl23a-ps13-201ENSMUST00000120350 441 ntBASIC1.25□□□□□ -2.21
Retrieved 100 of 76,532 protein–RNA pairs in 88.1 ms