Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Mir7047-201ENSMUST00000184595 64 ntBASIC0.54□□□□□ -2.32
Smco4Q9JIS3 Gm38064-201ENSMUST00000194032 444 ntTSL 3 BASIC0.54□□□□□ -2.32
Smco4Q9JIS3 Gm45071-201ENSMUST00000205353 571 ntBASIC0.54□□□□□ -2.32
Smco4Q9JIS3 Gm44657-201ENSMUST00000208568 450 ntBASIC0.54□□□□□ -2.32
Smco4Q9JIS3 Gm34113-201ENSMUST00000213796 388 ntTSL 2 BASIC0.54□□□□□ -2.32
Smco4Q9JIS3 CT486006.1-201ENSMUST00000216797 227 ntTSL 5 BASIC0.54□□□□□ -2.32
Smco4Q9JIS3 AC154521.1-201ENSMUST00000222635 330 ntBASIC0.54□□□□□ -2.32
Smco4Q9JIS3 AC122242.1-201ENSMUST00000224650 304 ntBASIC0.54□□□□□ -2.32
Smco4Q9JIS3 4933400A11Rik-202ENSMUST00000068894 1217 ntAPPRIS P1 TSL 1 (best) BASIC0.54□□□□□ -2.32
Smco4Q9JIS3 Gm23407-201ENSMUST00000082538 91 ntBASIC0.54□□□□□ -2.32
Smco4Q9JIS3 Fbxw14-203ENSMUST00000198844 1786 ntAPPRIS P3 TSL 1 (best) BASIC0.54□□□□□ -2.32
Smco4Q9JIS3 Gm23010-201ENSMUST00000104151 126 ntBASIC0.53□□□□□ -2.32
Smco4Q9JIS3 Gm11429-201ENSMUST00000119089 144 ntBASIC0.53□□□□□ -2.32
Smco4Q9JIS3 Gm6025-201ENSMUST00000121517 201 ntBASIC0.53□□□□□ -2.32
Smco4Q9JIS3 Gm11998-201ENSMUST00000146304 972 ntTSL 1 (best) BASIC0.53□□□□□ -2.32
Smco4Q9JIS3 Gm24837-201ENSMUST00000158683 81 ntBASIC0.53□□□□□ -2.32
Smco4Q9JIS3 Gm25707-201ENSMUST00000175120 96 ntBASIC0.53□□□□□ -2.32
Smco4Q9JIS3 Mrps36-ps3-201ENSMUST00000183899 305 ntBASIC0.53□□□□□ -2.32
Smco4Q9JIS3 Gm20811-201ENSMUST00000190500 553 ntBASIC0.53□□□□□ -2.32
Smco4Q9JIS3 Gm38041-201ENSMUST00000194445 661 ntBASIC0.53□□□□□ -2.32
Smco4Q9JIS3 Gm43245-201ENSMUST00000197603 468 ntBASIC0.53□□□□□ -2.32
Smco4Q9JIS3 Gm43427-201ENSMUST00000198188 331 ntBASIC0.53□□□□□ -2.32
Smco4Q9JIS3 Trav15d-3-201ENSMUST00000198604 167 ntBASIC0.53□□□□□ -2.32
Smco4Q9JIS3 Trav15n-3-201ENSMUST00000200498 168 ntBASIC0.53□□□□□ -2.32
Smco4Q9JIS3 Gm18645-201ENSMUST00000209593 651 ntBASIC0.53□□□□□ -2.32
Smco4Q9JIS3 AC123709.1-201ENSMUST00000224848 345 ntBASIC0.53□□□□□ -2.32
Smco4Q9JIS3 1700084M14Rik-201ENSMUST00000078832 559 ntAPPRIS P1 TSL 1 (best) BASIC0.53□□□□□ -2.32
Smco4Q9JIS3 Mir216a-201ENSMUST00000083605 72 ntBASIC0.53□□□□□ -2.32
Smco4Q9JIS3 Snord35a-201ENSMUST00000083884 90 ntBASIC0.53□□□□□ -2.32
Smco4Q9JIS3 Gm44240-201ENSMUST00000204015 2654 ntBASIC0.52□□□□□ -2.33
Smco4Q9JIS3 Gm13409-201ENSMUST00000122072 546 ntBASIC0.52□□□□□ -2.33
Smco4Q9JIS3 Lce6a-201ENSMUST00000138403 795 ntAPPRIS P1 TSL 5 BASIC0.52□□□□□ -2.33
Smco4Q9JIS3 Gm24053-201ENSMUST00000158620 105 ntBASIC0.52□□□□□ -2.33
Smco4Q9JIS3 Gm23636-201ENSMUST00000175070 95 ntBASIC0.52□□□□□ -2.33
Smco4Q9JIS3 Gm26692-201ENSMUST00000180428 688 ntTSL 1 (best) BASIC0.52□□□□□ -2.33
Smco4Q9JIS3 Snhg14-204ENSMUST00000185890 756 ntTSL 5 BASIC0.52□□□□□ -2.33
Smco4Q9JIS3 Gm29137-201ENSMUST00000190301 520 ntTSL 5 BASIC0.52□□□□□ -2.33
Smco4Q9JIS3 Olfr1479-ps1-201ENSMUST00000207752 382 ntBASIC0.52□□□□□ -2.33
Smco4Q9JIS3 Gm45590-201ENSMUST00000209715 262 ntBASIC0.52□□□□□ -2.33
Smco4Q9JIS3 Gm45689-201ENSMUST00000210522 133 ntBASIC0.52□□□□□ -2.33
Smco4Q9JIS3 Gm46994-201ENSMUST00000221523 219 ntBASIC0.52□□□□□ -2.33
Smco4Q9JIS3 Mir208a-201ENSMUST00000083498 83 ntBASIC0.52□□□□□ -2.33
Smco4Q9JIS3 Olfr1101-201ENSMUST00000099870 933 ntAPPRIS P1 BASIC0.52□□□□□ -2.33
Smco4Q9JIS3 Gm14910-201ENSMUST00000121037 1805 ntBASIC0.52□□□□□ -2.33
Smco4Q9JIS3 Olfr1151-202ENSMUST00000217376 2866 ntAPPRIS P1 TSL 5 BASIC0.51□□□□□ -2.33
Smco4Q9JIS3 AC164629.4-201ENSMUST00000218505 3247 ntBASIC0.51□□□□□ -2.33
Smco4Q9JIS3 Trav10n-201ENSMUST00000103612 343 ntAPPRIS P1 BASIC0.51□□□□□ -2.33
Smco4Q9JIS3 Gm14785-201ENSMUST00000120185 539 ntBASIC0.51□□□□□ -2.33
Smco4Q9JIS3 Gm25768-201ENSMUST00000158570 98 ntBASIC0.51□□□□□ -2.33
Smco4Q9JIS3 Mir7683-201ENSMUST00000183842 61 ntBASIC0.51□□□□□ -2.33
Smco4Q9JIS3 Gm18357-201ENSMUST00000188184 580 ntBASIC0.51□□□□□ -2.33
Smco4Q9JIS3 Sly-201ENSMUST00000189109 797 ntAPPRIS ALT2 TSL 1 (best) BASIC0.51□□□□□ -2.33
Smco4Q9JIS3 Gm45455-202ENSMUST00000211156 630 ntTSL 1 (best) BASIC0.51□□□□□ -2.33
Smco4Q9JIS3 Olfr812-201ENSMUST00000057775 1043 ntAPPRIS P1 BASIC0.51□□□□□ -2.33
Smco4Q9JIS3 Gm24144-201ENSMUST00000082632 111 ntBASIC0.51□□□□□ -2.33
Smco4Q9JIS3 Mir193a-201ENSMUST00000083461 66 ntBASIC0.51□□□□□ -2.33
Smco4Q9JIS3 Gm14932-201ENSMUST00000117112 453 ntBASIC0.5□□□□□ -2.33
Smco4Q9JIS3 Rps13-ps7-201ENSMUST00000122045 368 ntBASIC0.5□□□□□ -2.33
Smco4Q9JIS3 Gm14167-201ENSMUST00000148705 433 ntTSL 3 BASIC0.5□□□□□ -2.33
Smco4Q9JIS3 Gm25365-201ENSMUST00000158852 121 ntBASIC0.5□□□□□ -2.33
Smco4Q9JIS3 Vmn2r-ps126-201ENSMUST00000176711 1149 ntBASIC0.5□□□□□ -2.33
Smco4Q9JIS3 Gm27660-201ENSMUST00000184028 208 ntBASIC0.5□□□□□ -2.33
Smco4Q9JIS3 Gm37175-201ENSMUST00000192023 587 ntTSL 5 BASIC0.5□□□□□ -2.33
Smco4Q9JIS3 4930590L20Rik-201ENSMUST00000193820 553 ntTSL 1 (best) BASIC0.5□□□□□ -2.33
Smco4Q9JIS3 Gm43224-201ENSMUST00000201567 898 ntBASIC0.5□□□□□ -2.33
Smco4Q9JIS3 Gm19441-201ENSMUST00000221545 330 ntBASIC0.5□□□□□ -2.33
Smco4Q9JIS3 Mir125b-2-201ENSMUST00000083538 71 ntBASIC0.5□□□□□ -2.33
Smco4Q9JIS3 Mir27b-201ENSMUST00000083541 73 ntBASIC0.5□□□□□ -2.33
Smco4Q9JIS3 Arhgap5-204ENSMUST00000219443 9323 ntAPPRIS P1 TSL 5 BASIC0.5□□□□□ -2.33
Smco4Q9JIS3 Gm18360-201ENSMUST00000173327 1524 ntBASIC0.49□□□□□ -2.33
Smco4Q9JIS3 Gm17916-201ENSMUST00000186137 1342 ntTSL 1 (best) BASIC0.49□□□□□ -2.33
Smco4Q9JIS3 Gm26080-201ENSMUST00000104069 131 ntBASIC0.49□□□□□ -2.33
Smco4Q9JIS3 Gm13588-201ENSMUST00000120026 135 ntBASIC0.49□□□□□ -2.33
Smco4Q9JIS3 Gm23391-201ENSMUST00000157579 104 ntBASIC0.49□□□□□ -2.33
Smco4Q9JIS3 Gm22556-201ENSMUST00000157803 100 ntBASIC0.49□□□□□ -2.33
Smco4Q9JIS3 Mir7026-201ENSMUST00000184384 67 ntBASIC0.49□□□□□ -2.33
Smco4Q9JIS3 Gm29005-201ENSMUST00000186773 320 ntBASIC0.49□□□□□ -2.33
Smco4Q9JIS3 Gm28404-201ENSMUST00000190242 453 ntBASIC0.49□□□□□ -2.33
Smco4Q9JIS3 Gm29573-201ENSMUST00000190291 919 ntBASIC0.49□□□□□ -2.33
Smco4Q9JIS3 Gm28961-201ENSMUST00000190573 923 ntAPPRIS P1 TSL 1 (best) BASIC0.49□□□□□ -2.33
Smco4Q9JIS3 9430083B18Rik-201ENSMUST00000191908 863 ntBASIC0.49□□□□□ -2.33
Smco4Q9JIS3 Gm33354-201ENSMUST00000195448 906 ntBASIC0.49□□□□□ -2.33
Smco4Q9JIS3 Igkv4-65-201ENSMUST00000196986 358 ntBASIC0.49□□□□□ -2.33
Smco4Q9JIS3 Gm25820-202ENSMUST00000197479 128 ntBASIC0.49□□□□□ -2.33
Smco4Q9JIS3 Gm43676-201ENSMUST00000197532 540 ntBASIC0.49□□□□□ -2.33
Smco4Q9JIS3 Olfr175-ps1-202ENSMUST00000215069 1201 ntAPPRIS P1 TSL 5 BASIC0.49□□□□□ -2.33
Smco4Q9JIS3 Gm8125-201ENSMUST00000216602 738 ntBASIC0.49□□□□□ -2.33
Smco4Q9JIS3 AC101945.3-201ENSMUST00000226568 153 ntBASIC0.49□□□□□ -2.33
Smco4Q9JIS3 AC125464.1-201ENSMUST00000228013 512 ntBASIC0.49□□□□□ -2.33
Smco4Q9JIS3 Olfr175-ps1-201ENSMUST00000079955 1169 ntAPPRIS P1 TSL 2 BASIC0.49□□□□□ -2.33
Smco4Q9JIS3 Mir343-201ENSMUST00000102360 75 ntBASIC0.48□□□□□ -2.33
Smco4Q9JIS3 Gm25832-201ENSMUST00000104140 130 ntBASIC0.48□□□□□ -2.33
Smco4Q9JIS3 Gm15659-201ENSMUST00000118881 341 ntBASIC0.48□□□□□ -2.33
Smco4Q9JIS3 Gm14363-201ENSMUST00000122304 409 ntBASIC0.48□□□□□ -2.33
Smco4Q9JIS3 Gm23170-201ENSMUST00000157158 106 ntBASIC0.48□□□□□ -2.33
Smco4Q9JIS3 Gm23137-201ENSMUST00000157559 107 ntBASIC0.48□□□□□ -2.33
Smco4Q9JIS3 Gm22716-201ENSMUST00000177596 107 ntBASIC0.48□□□□□ -2.33
Smco4Q9JIS3 Gm1553-201ENSMUST00000177934 658 ntAPPRIS P1 TSL 1 (best) BASIC0.48□□□□□ -2.33
Smco4Q9JIS3 Gm24638-201ENSMUST00000179807 132 ntBASIC0.48□□□□□ -2.33
Smco4Q9JIS3 Obox1-206ENSMUST00000181001 1217 ntAPPRIS P1 TSL 5 BASIC0.48□□□□□ -2.33
Retrieved 100 of 76,532 protein–RNA pairs in 69.8 ms