Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Gm26767-201ENSMUST00000180936 4476 ntTSL 5 BASIC5.07□□□□□ -1.6
Ube3bQ9ES34 Clvs1-201ENSMUST00000038841 3604 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Ube3bQ9ES34 Tom1l1-201ENSMUST00000020849 4308 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Ube3bQ9ES34 Olfr1223-201ENSMUST00000217342 2333 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
Ube3bQ9ES34 Rnf128-202ENSMUST00000113027 2641 ntTSL 5 BASIC5.07□□□□□ -1.6
Ube3bQ9ES34 Gm43844-201ENSMUST00000202926 5605 ntBASIC5.07□□□□□ -1.6
Ube3bQ9ES34 Acsm3-203ENSMUST00000106527 2557 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Ube3bQ9ES34 Vmn1r206-202ENSMUST00000227244 3970 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Ube3bQ9ES34 Gm44542-201ENSMUST00000208677 4314 ntBASIC5.06□□□□□ -1.6
Ube3bQ9ES34 AC152981.1-201ENSMUST00000218320 2480 ntBASIC5.06□□□□□ -1.6
Ube3bQ9ES34 Gm37479-201ENSMUST00000194169 3841 ntBASIC5.06□□□□□ -1.6
Ube3bQ9ES34 Adam7-201ENSMUST00000022640 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Ube3bQ9ES34 Eda2r-201ENSMUST00000037353 4752 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Ube3bQ9ES34 Gm17752-201ENSMUST00000185787 3726 ntBASIC5.06□□□□□ -1.6
Ube3bQ9ES34 AC158805.1-201ENSMUST00000218197 2631 ntBASIC5.06□□□□□ -1.6
Ube3bQ9ES34 Gm21032-201ENSMUST00000208108 2578 ntBASIC5.06□□□□□ -1.6
Ube3bQ9ES34 Mir1298-201ENSMUST00000116681 98 ntBASIC5.06□□□□□ -1.6
Ube3bQ9ES34 Gm11432-201ENSMUST00000117334 231 ntBASIC5.06□□□□□ -1.6
Ube3bQ9ES34 Gm12261-201ENSMUST00000117499 645 ntBASIC5.06□□□□□ -1.6
Ube3bQ9ES34 Gm12793-201ENSMUST00000119268 292 ntBASIC5.06□□□□□ -1.6
Ube3bQ9ES34 Gm11456-201ENSMUST00000121070 256 ntBASIC5.06□□□□□ -1.6
Ube3bQ9ES34 Gm25805-201ENSMUST00000122788 108 ntBASIC5.06□□□□□ -1.6
Ube3bQ9ES34 Gm25424-201ENSMUST00000157612 58 ntBASIC5.06□□□□□ -1.6
Ube3bQ9ES34 Gm23554-201ENSMUST00000157818 110 ntBASIC5.06□□□□□ -1.6
Ube3bQ9ES34 Gm45492-201ENSMUST00000211611 288 ntBASIC5.06□□□□□ -1.6
Ube3bQ9ES34 Sprr2e-201ENSMUST00000068399 647 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Ube3bQ9ES34 Gm7173-201ENSMUST00000101410 2832 ntAPPRIS P4 TSL 5 BASIC5.06□□□□□ -1.6
Ube3bQ9ES34 Olfr1366-202ENSMUST00000175637 3045 ntAPPRIS ALT2 TSL 3 BASIC5.06□□□□□ -1.6
Ube3bQ9ES34 Olfr220-202ENSMUST00000194229 3286 ntAPPRIS P1 TSL 3 BASIC5.06□□□□□ -1.6
Ube3bQ9ES34 Usp15-211ENSMUST00000220377 11525 ntAPPRIS P2 TSL 1 (best) BASIC5.06□□□□□ -1.6
Ube3bQ9ES34 Vmn1r171-207ENSMUST00000227774 2867 ntAPPRIS ALT2 BASIC5.06□□□□□ -1.6
Ube3bQ9ES34 Hnrnpr-207ENSMUST00000148843 21452 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Ube3bQ9ES34 Vmn2r-ps69-201ENSMUST00000173382 2565 ntBASIC5.06□□□□□ -1.6
Ube3bQ9ES34 Vmn1r178-204ENSMUST00000226640 2282 ntBASIC5.06□□□□□ -1.6
Ube3bQ9ES34 Oog2-201ENSMUST00000080405 1917 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Ube3bQ9ES34 AI314180-203ENSMUST00000107557 4946 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
Ube3bQ9ES34 Kcnj1-201ENSMUST00000047334 2987 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Ube3bQ9ES34 Olfr2-203ENSMUST00000208147 6178 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Ube3bQ9ES34 Ank2-208ENSMUST00000182078 14305 ntAPPRIS P2 TSL 5 BASIC5.05□□□□□ -1.6
Ube3bQ9ES34 Gm25537-201ENSMUST00000103851 109 ntBASIC5.05□□□□□ -1.6
Ube3bQ9ES34 Gm8666-201ENSMUST00000117517 292 ntBASIC5.05□□□□□ -1.6
Ube3bQ9ES34 Gm12252-201ENSMUST00000119517 219 ntBASIC5.05□□□□□ -1.6
Ube3bQ9ES34 Gm25177-201ENSMUST00000122634 117 ntBASIC5.05□□□□□ -1.6
Ube3bQ9ES34 Gm25889-201ENSMUST00000157775 107 ntBASIC5.05□□□□□ -1.6
Ube3bQ9ES34 Gm22968-201ENSMUST00000157955 118 ntBASIC5.05□□□□□ -1.6
Ube3bQ9ES34 Gm27834-201ENSMUST00000183427 125 ntBASIC5.05□□□□□ -1.6
Ube3bQ9ES34 Gm18956-201ENSMUST00000192857 480 ntBASIC5.05□□□□□ -1.6
Ube3bQ9ES34 Gm43604-201ENSMUST00000199799 705 ntBASIC5.05□□□□□ -1.6
Ube3bQ9ES34 Gm43730-201ENSMUST00000199863 372 ntBASIC5.05□□□□□ -1.6
Ube3bQ9ES34 Igkv13-55-1-201ENSMUST00000200400 308 ntBASIC5.05□□□□□ -1.6
Ube3bQ9ES34 Mir133a-2-201ENSMUST00000083526 104 ntBASIC5.05□□□□□ -1.6
Ube3bQ9ES34 Gm25895-201ENSMUST00000083714 100 ntBASIC5.05□□□□□ -1.6
Ube3bQ9ES34 n-R5s54-201ENSMUST00000083837 112 ntBASIC5.05□□□□□ -1.6
Ube3bQ9ES34 Gm10172-201ENSMUST00000085929 558 ntBASIC5.05□□□□□ -1.6
Ube3bQ9ES34 Olfr665-202ENSMUST00000215761 2522 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Ube3bQ9ES34 B3galt1-201ENSMUST00000042456 2855 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Ube3bQ9ES34 Gm28634-201ENSMUST00000191087 2613 ntBASIC5.05□□□□□ -1.6
Ube3bQ9ES34 Hm629797-201ENSMUST00000183645 2398 ntBASIC5.05□□□□□ -1.6
Ube3bQ9ES34 Zfp101-204ENSMUST00000174512 3743 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Ube3bQ9ES34 Vmn1r169-202ENSMUST00000226669 2326 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Ube3bQ9ES34 Vmn1r169-203ENSMUST00000227547 2322 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Ube3bQ9ES34 Cntn6-205ENSMUST00000162872 3467 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Ube3bQ9ES34 Foxr2-201ENSMUST00000096265 3210 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Ube3bQ9ES34 Olfr362-202ENSMUST00000213817 4059 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Ube3bQ9ES34 Gm42717-201ENSMUST00000197309 3463 ntBASIC5.04□□□□□ -1.6
Ube3bQ9ES34 Vmn1r209-202ENSMUST00000227038 6461 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Ube3bQ9ES34 Gm22148-201ENSMUST00000104445 107 ntBASIC5.04□□□□□ -1.6
Ube3bQ9ES34 Gm23320-201ENSMUST00000104462 127 ntBASIC5.04□□□□□ -1.6
Ube3bQ9ES34 S100a5-202ENSMUST00000107329 431 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Ube3bQ9ES34 Gm26049-201ENSMUST00000157313 108 ntBASIC5.04□□□□□ -1.6
Ube3bQ9ES34 Gm22135-201ENSMUST00000158752 108 ntBASIC5.04□□□□□ -1.6
Ube3bQ9ES34 Gm19898-201ENSMUST00000177490 251 ntBASIC5.04□□□□□ -1.6
Ube3bQ9ES34 Gm23215-201ENSMUST00000178153 121 ntBASIC5.04□□□□□ -1.6
Ube3bQ9ES34 Gm27222-201ENSMUST00000183398 427 ntTSL 5 BASIC5.04□□□□□ -1.6
Ube3bQ9ES34 Gm8874-201ENSMUST00000196826 286 ntBASIC5.04□□□□□ -1.6
Ube3bQ9ES34 Vmn1r171-205ENSMUST00000226771 2718 ntAPPRIS ALT2 BASIC5.04□□□□□ -1.6
Ube3bQ9ES34 Gpr82-201ENSMUST00000053659 2497 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Ube3bQ9ES34 Macc1-201ENSMUST00000048880 3818 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Ube3bQ9ES34 Gm5117-201ENSMUST00000178878 2553 ntBASIC5.04□□□□□ -1.6
Ube3bQ9ES34 Ccnb3-201ENSMUST00000056725 4475 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Ube3bQ9ES34 Gm45662-201ENSMUST00000210054 2098 ntBASIC5.03□□□□□ -1.6
Ube3bQ9ES34 Olfr211-202ENSMUST00000203700 4880 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
Ube3bQ9ES34 Vmn1r215-202ENSMUST00000228092 2790 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Ube3bQ9ES34 Vmn2r30-202ENSMUST00000174368 3688 ntTSL 2 BASIC5.03□□□□□ -1.6
Ube3bQ9ES34 Vmn1r42-202ENSMUST00000226436 4045 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Ube3bQ9ES34 Gm5963-201ENSMUST00000143451 236 ntBASIC5.03□□□□□ -1.6
Ube3bQ9ES34 Gm22225-201ENSMUST00000157358 278 ntBASIC5.03□□□□□ -1.6
Ube3bQ9ES34 Gm25220-201ENSMUST00000157546 95 ntBASIC5.03□□□□□ -1.6
Ube3bQ9ES34 Gm26036-201ENSMUST00000158149 144 ntBASIC5.03□□□□□ -1.6
Ube3bQ9ES34 Gm28660-201ENSMUST00000186496 253 ntBASIC5.03□□□□□ -1.6
Ube3bQ9ES34 Gm38298-201ENSMUST00000193578 118 ntBASIC5.03□□□□□ -1.6
Ube3bQ9ES34 Gm37898-201ENSMUST00000193781 174 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Ube3bQ9ES34 Gm8790-201ENSMUST00000194108 322 ntBASIC5.03□□□□□ -1.6
Ube3bQ9ES34 Gm17887-201ENSMUST00000200194 547 ntBASIC5.03□□□□□ -1.6
Ube3bQ9ES34 Ccl5-201ENSMUST00000035938 532 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Ube3bQ9ES34 Gm22681-201ENSMUST00000083853 106 ntBASIC5.03□□□□□ -1.6
Ube3bQ9ES34 Agtr2-201ENSMUST00000089188 3283 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Ube3bQ9ES34 Ktn1-226ENSMUST00000191511 3962 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
Ube3bQ9ES34 Ckap5-204ENSMUST00000111338 6665 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Ube3bQ9ES34 Gm4631-202ENSMUST00000121393 4402 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 83.8 ms