Protein–RNA interactions for Protein: Q9ERP3

Trim54, Tripartite motif-containing protein 54, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54Q9ERP3 Gm24760-201ENSMUST00000178530 94 ntBASIC3.31□□□□□ -1.88
Trim54Q9ERP3 Gm22285-201ENSMUST00000178576 94 ntBASIC3.31□□□□□ -1.88
Trim54Q9ERP3 Gm22417-201ENSMUST00000178656 94 ntBASIC3.31□□□□□ -1.88
Trim54Q9ERP3 Snord116l2-201ENSMUST00000178675 94 ntBASIC3.31□□□□□ -1.88
Trim54Q9ERP3 Gm26270-201ENSMUST00000178690 94 ntBASIC3.31□□□□□ -1.88
Trim54Q9ERP3 Snord116l16-201ENSMUST00000178777 94 ntBASIC3.31□□□□□ -1.88
Trim54Q9ERP3 Gm23313-201ENSMUST00000178931 94 ntBASIC3.31□□□□□ -1.88
Trim54Q9ERP3 Snord116l17-201ENSMUST00000178936 94 ntBASIC3.31□□□□□ -1.88
Trim54Q9ERP3 Gm23089-201ENSMUST00000178947 94 ntBASIC3.31□□□□□ -1.88
Trim54Q9ERP3 Snord116l10-201ENSMUST00000179053 94 ntBASIC3.31□□□□□ -1.88
Trim54Q9ERP3 Gm24153-201ENSMUST00000179280 94 ntBASIC3.31□□□□□ -1.88
Trim54Q9ERP3 Gm25597-201ENSMUST00000179388 94 ntBASIC3.31□□□□□ -1.88
Trim54Q9ERP3 Snord116l1-201ENSMUST00000179518 94 ntBASIC3.31□□□□□ -1.88
Trim54Q9ERP3 Gm25816-201ENSMUST00000179764 94 ntBASIC3.31□□□□□ -1.88
Trim54Q9ERP3 Snord116l8-201ENSMUST00000179889 94 ntBASIC3.31□□□□□ -1.88
Trim54Q9ERP3 Snord116l7-201ENSMUST00000179895 94 ntBASIC3.31□□□□□ -1.88
Trim54Q9ERP3 Snord116l5-201ENSMUST00000179927 94 ntBASIC3.31□□□□□ -1.88
Trim54Q9ERP3 Snord116l6-201ENSMUST00000179955 94 ntBASIC3.31□□□□□ -1.88
Trim54Q9ERP3 Gm26188-201ENSMUST00000179963 94 ntBASIC3.31□□□□□ -1.88
Trim54Q9ERP3 Gm26433-201ENSMUST00000180227 94 ntBASIC3.31□□□□□ -1.88
Trim54Q9ERP3 Snord116l11-201ENSMUST00000180312 94 ntBASIC3.31□□□□□ -1.88
Trim54Q9ERP3 Gm22128-201ENSMUST00000180346 94 ntBASIC3.31□□□□□ -1.88
Trim54Q9ERP3 Gm28002-201ENSMUST00000184832 100 ntBASIC3.31□□□□□ -1.88
Trim54Q9ERP3 Gm28271-201ENSMUST00000191369 351 ntTSL 3 BASIC3.31□□□□□ -1.88
Trim54Q9ERP3 Gm38041-201ENSMUST00000194445 661 ntBASIC3.31□□□□□ -1.88
Trim54Q9ERP3 Gm18433-202ENSMUST00000195682 196 ntBASIC3.31□□□□□ -1.88
Trim54Q9ERP3 Gm43239-201ENSMUST00000200131 201 ntBASIC3.31□□□□□ -1.88
Trim54Q9ERP3 4930596I21Rik-201ENSMUST00000200494 461 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Trim54Q9ERP3 Gm44336-201ENSMUST00000203696 468 ntBASIC3.31□□□□□ -1.88
Trim54Q9ERP3 Gm38997-201ENSMUST00000205669 304 ntTSL 5 BASIC3.31□□□□□ -1.88
Trim54Q9ERP3 S100z-201ENSMUST00000022186 399 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Trim54Q9ERP3 Gm35190-201ENSMUST00000222335 526 ntTSL 3 BASIC3.31□□□□□ -1.88
Trim54Q9ERP3 AC154600.1-201ENSMUST00000226480 714 ntBASIC3.31□□□□□ -1.88
Trim54Q9ERP3 Gm23627-201ENSMUST00000082459 107 ntBASIC3.31□□□□□ -1.88
Trim54Q9ERP3 Gm22502-201ENSMUST00000082488 107 ntBASIC3.31□□□□□ -1.88
Trim54Q9ERP3 Gm22977-201ENSMUST00000082615 107 ntBASIC3.31□□□□□ -1.88
Trim54Q9ERP3 Gm24149-201ENSMUST00000082757 107 ntBASIC3.31□□□□□ -1.88
Trim54Q9ERP3 Mir181a-1-201ENSMUST00000083631 87 ntBASIC3.31□□□□□ -1.88
Trim54Q9ERP3 Gm43032-201ENSMUST00000197967 3123 ntBASIC3.31□□□□□ -1.88
Trim54Q9ERP3 Olfr483-202ENSMUST00000215159 2691 ntAPPRIS P1 TSL 3 BASIC3.31□□□□□ -1.88
Trim54Q9ERP3 Olfr299-202ENSMUST00000217253 4479 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Trim54Q9ERP3 Gm44150-201ENSMUST00000203317 2619 ntBASIC3.3□□□□□ -1.88
Trim54Q9ERP3 Olfr124-204ENSMUST00000217365 4365 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Trim54Q9ERP3 Gm24068-201ENSMUST00000104513 132 ntBASIC3.3□□□□□ -1.88
Trim54Q9ERP3 Gm12782-201ENSMUST00000117519 727 ntBASIC3.3□□□□□ -1.88
Trim54Q9ERP3 Gm14841-201ENSMUST00000121067 758 ntBASIC3.3□□□□□ -1.88
Trim54Q9ERP3 Gm23886-201ENSMUST00000122684 313 ntBASIC3.3□□□□□ -1.88
Trim54Q9ERP3 A630050E04Rik-201ENSMUST00000151443 581 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Trim54Q9ERP3 Gm16155-201ENSMUST00000155180 338 ntTSL 3 BASIC3.3□□□□□ -1.88
Trim54Q9ERP3 Gm26215-201ENSMUST00000158584 139 ntBASIC3.3□□□□□ -1.88
Trim54Q9ERP3 4930555M17Rik-201ENSMUST00000176666 402 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Trim54Q9ERP3 Gm21171-201ENSMUST00000180048 673 ntBASIC3.3□□□□□ -1.88
Trim54Q9ERP3 Gm27921-201ENSMUST00000183968 108 ntBASIC3.3□□□□□ -1.88
Trim54Q9ERP3 Mir8096-201ENSMUST00000184526 127 ntBASIC3.3□□□□□ -1.88
Trim54Q9ERP3 Gm28700-201ENSMUST00000187614 579 ntBASIC3.3□□□□□ -1.88
Trim54Q9ERP3 Gm29633-204ENSMUST00000187737 675 ntTSL 5 BASIC3.3□□□□□ -1.88
Trim54Q9ERP3 Olfr1285-201ENSMUST00000208523 903 ntBASIC3.3□□□□□ -1.88
Trim54Q9ERP3 Gm10264-201ENSMUST00000220589 429 ntBASIC3.3□□□□□ -1.88
Trim54Q9ERP3 Sval1-201ENSMUST00000031898 615 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Trim54Q9ERP3 Gm22364-201ENSMUST00000083097 98 ntBASIC3.3□□□□□ -1.88
Trim54Q9ERP3 Gm37788-201ENSMUST00000193958 2705 ntBASIC3.3□□□□□ -1.88
Trim54Q9ERP3 Vmn2r81-201ENSMUST00000020547 3276 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Trim54Q9ERP3 Zfp934-202ENSMUST00000101547 2147 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Trim54Q9ERP3 Gm11228-201ENSMUST00000143796 2013 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Trim54Q9ERP3 4932412D23Rik-203ENSMUST00000142270 4105 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Trim54Q9ERP3 Gm25728-201ENSMUST00000104525 159 ntBASIC3.29□□□□□ -1.88
Trim54Q9ERP3 Gm13085-201ENSMUST00000118356 171 ntBASIC3.29□□□□□ -1.88
Trim54Q9ERP3 Gm14852-201ENSMUST00000120065 647 ntBASIC3.29□□□□□ -1.88
Trim54Q9ERP3 Gm13794-201ENSMUST00000148637 468 ntTSL 3 BASIC3.29□□□□□ -1.88
Trim54Q9ERP3 Gm23435-201ENSMUST00000157183 156 ntBASIC3.29□□□□□ -1.88
Trim54Q9ERP3 Gm23704-201ENSMUST00000158844 340 ntBASIC3.29□□□□□ -1.88
Trim54Q9ERP3 Gm25360-201ENSMUST00000178786 191 ntBASIC3.29□□□□□ -1.88
Trim54Q9ERP3 Gm29235-201ENSMUST00000185786 442 ntTSL 5 BASIC3.29□□□□□ -1.88
Trim54Q9ERP3 Gm29335-201ENSMUST00000188361 459 ntBASIC3.29□□□□□ -1.88
Trim54Q9ERP3 Igkv12-49-201ENSMUST00000197714 278 ntBASIC3.29□□□□□ -1.88
Trim54Q9ERP3 Olfr192-203ENSMUST00000206214 1054 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Trim54Q9ERP3 Olfr1481-ps1-201ENSMUST00000207312 134 ntBASIC3.29□□□□□ -1.88
Trim54Q9ERP3 n-R5s94-201ENSMUST00000082573 119 ntBASIC3.29□□□□□ -1.88
Trim54Q9ERP3 Gm24948-201ENSMUST00000082866 207 ntBASIC3.29□□□□□ -1.88
Trim54Q9ERP3 Gm26056-201ENSMUST00000083043 104 ntBASIC3.29□□□□□ -1.88
Trim54Q9ERP3 Olfr561-201ENSMUST00000098217 1071 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Trim54Q9ERP3 Olfr1156-201ENSMUST00000099842 1076 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Trim54Q9ERP3 Wnk3-201ENSMUST00000096285 8551 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
Trim54Q9ERP3 Gm42448-201ENSMUST00000197122 2644 ntBASIC3.29□□□□□ -1.88
Trim54Q9ERP3 Olfr862-202ENSMUST00000079660 2604 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Trim54Q9ERP3 Gm19428-201ENSMUST00000220512 1995 ntBASIC3.29□□□□□ -1.88
Trim54Q9ERP3 Mir693-201ENSMUST00000102187 89 ntBASIC3.28□□□□□ -1.88
Trim54Q9ERP3 Gm14574-201ENSMUST00000120644 279 ntBASIC3.28□□□□□ -1.88
Trim54Q9ERP3 Gm24914-201ENSMUST00000157285 313 ntBASIC3.28□□□□□ -1.88
Trim54Q9ERP3 Gm28090-201ENSMUST00000189458 664 ntBASIC3.28□□□□□ -1.88
Trim54Q9ERP3 Gm38050-201ENSMUST00000191904 238 ntBASIC3.28□□□□□ -1.88
Trim54Q9ERP3 4930511M18Rik-201ENSMUST00000197811 679 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Trim54Q9ERP3 Gm35931-201ENSMUST00000203931 448 ntBASIC3.28□□□□□ -1.88
Trim54Q9ERP3 AC126554.1-201ENSMUST00000222161 271 ntBASIC3.28□□□□□ -1.88
Trim54Q9ERP3 Zfp706-205ENSMUST00000228275 481 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Trim54Q9ERP3 Olfr822-201ENSMUST00000080460 942 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Trim54Q9ERP3 mt-Tr-201ENSMUST00000082412 68 ntBASIC3.28□□□□□ -1.88
Trim54Q9ERP3 Gm25856-201ENSMUST00000082786 75 ntBASIC3.28□□□□□ -1.88
Trim54Q9ERP3 Gm37320-201ENSMUST00000192781 4953 ntBASIC3.28□□□□□ -1.88
Trim54Q9ERP3 Gm42801-201ENSMUST00000202562 2865 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 101.2 ms