Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Gm20832-201ENSMUST00000189076 665 ntBASIC1.81□□□□□ -2.12
Lima1Q9ERG0 Gm28241-201ENSMUST00000190916 235 ntBASIC1.81□□□□□ -2.12
Lima1Q9ERG0 Gm28504-201ENSMUST00000190977 666 ntBASIC1.81□□□□□ -2.12
Lima1Q9ERG0 Gm37455-201ENSMUST00000191993 529 ntBASIC1.81□□□□□ -2.12
Lima1Q9ERG0 Gm31511-201ENSMUST00000193134 657 ntBASIC1.81□□□□□ -2.12
Lima1Q9ERG0 Gm37550-201ENSMUST00000193230 463 ntBASIC1.81□□□□□ -2.12
Lima1Q9ERG0 Gm35843-201ENSMUST00000193716 666 ntBASIC1.81□□□□□ -2.12
Lima1Q9ERG0 Gm36728-201ENSMUST00000195782 665 ntBASIC1.81□□□□□ -2.12
Lima1Q9ERG0 Gm43007-201ENSMUST00000197618 291 ntBASIC1.81□□□□□ -2.12
Lima1Q9ERG0 Gm43531-201ENSMUST00000200676 1114 ntBASIC1.81□□□□□ -2.12
Lima1Q9ERG0 Gm44844-201ENSMUST00000207242 336 ntBASIC1.81□□□□□ -2.12
Lima1Q9ERG0 4930402F11Rik-202ENSMUST00000207781 1178 ntTSL 5 BASIC1.81□□□□□ -2.12
Lima1Q9ERG0 Olfr546-ps1-201ENSMUST00000210328 326 ntBASIC1.81□□□□□ -2.12
Lima1Q9ERG0 D730003K21Rik-201ENSMUST00000215052 589 ntTSL 2 BASIC1.81□□□□□ -2.12
Lima1Q9ERG0 Gm19709-201ENSMUST00000215403 482 ntBASIC1.81□□□□□ -2.12
Lima1Q9ERG0 Olfr967-201ENSMUST00000069561 933 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
Lima1Q9ERG0 Gm25813-201ENSMUST00000082748 191 ntBASIC1.81□□□□□ -2.12
Lima1Q9ERG0 Gm37941-201ENSMUST00000192170 2309 ntBASIC1.81□□□□□ -2.12
Lima1Q9ERG0 Gm37903-201ENSMUST00000192122 2381 ntBASIC1.8□□□□□ -2.12
Lima1Q9ERG0 Olfr165-202ENSMUST00000206110 1862 ntAPPRIS ALT1 TSL 3 BASIC1.8□□□□□ -2.12
Lima1Q9ERG0 Gm10999-201ENSMUST00000108743 207 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
Lima1Q9ERG0 Gm6664-201ENSMUST00000119138 468 ntBASIC1.8□□□□□ -2.12
Lima1Q9ERG0 Gm5646-201ENSMUST00000120568 714 ntBASIC1.8□□□□□ -2.12
Lima1Q9ERG0 Scgb2b22-ps-201ENSMUST00000121947 340 ntBASIC1.8□□□□□ -2.12
Lima1Q9ERG0 Vmn2r-ps70-201ENSMUST00000174636 302 ntBASIC1.8□□□□□ -2.12
Lima1Q9ERG0 Gm24111-201ENSMUST00000175491 97 ntBASIC1.8□□□□□ -2.12
Lima1Q9ERG0 Gm24100-201ENSMUST00000178592 79 ntBASIC1.8□□□□□ -2.12
Lima1Q9ERG0 Gm26189-201ENSMUST00000179879 107 ntBASIC1.8□□□□□ -2.12
Lima1Q9ERG0 Mir7667-201ENSMUST00000183866 63 ntBASIC1.8□□□□□ -2.12
Lima1Q9ERG0 Gm29600-201ENSMUST00000188687 377 ntBASIC1.8□□□□□ -2.12
Lima1Q9ERG0 Olfr1430-ps1-201ENSMUST00000207422 917 ntBASIC1.8□□□□□ -2.12
Lima1Q9ERG0 AC159475.1-201ENSMUST00000216752 411 ntTSL 5 BASIC1.8□□□□□ -2.12
Lima1Q9ERG0 AC153522.1-201ENSMUST00000220047 1090 ntBASIC1.8□□□□□ -2.12
Lima1Q9ERG0 AC166358.6-201ENSMUST00000221834 1206 ntBASIC1.8□□□□□ -2.12
Lima1Q9ERG0 Gm7214-201ENSMUST00000222428 272 ntBASIC1.8□□□□□ -2.12
Lima1Q9ERG0 Olfr1018-202ENSMUST00000214416 3186 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
Lima1Q9ERG0 Gm26077-201ENSMUST00000104064 123 ntBASIC1.79□□□□□ -2.12
Lima1Q9ERG0 Mir3096-201ENSMUST00000116685 71 ntBASIC1.79□□□□□ -2.12
Lima1Q9ERG0 Mup-ps14-201ENSMUST00000118437 532 ntBASIC1.79□□□□□ -2.12
Lima1Q9ERG0 Gm11784-201ENSMUST00000118568 474 ntBASIC1.79□□□□□ -2.12
Lima1Q9ERG0 Gm15452-201ENSMUST00000119877 240 ntBASIC1.79□□□□□ -2.12
Lima1Q9ERG0 Gm14989-201ENSMUST00000120497 207 ntBASIC1.79□□□□□ -2.12
Lima1Q9ERG0 Gm15061-201ENSMUST00000121076 1046 ntBASIC1.79□□□□□ -2.12
Lima1Q9ERG0 Mup-ps2-201ENSMUST00000142602 533 ntBASIC1.79□□□□□ -2.12
Lima1Q9ERG0 Gm11998-201ENSMUST00000146304 972 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
Lima1Q9ERG0 Gm13794-201ENSMUST00000148637 468 ntTSL 3 BASIC1.79□□□□□ -2.12
Lima1Q9ERG0 Gm22186-201ENSMUST00000157822 122 ntBASIC1.79□□□□□ -2.12
Lima1Q9ERG0 Gm23032-201ENSMUST00000157995 107 ntBASIC1.79□□□□□ -2.12
Lima1Q9ERG0 Gm22535-201ENSMUST00000158174 119 ntBASIC1.79□□□□□ -2.12
Lima1Q9ERG0 Gm2930-201ENSMUST00000170403 474 ntBASIC1.79□□□□□ -2.12
Lima1Q9ERG0 Gm11168-203ENSMUST00000178348 672 ntAPPRIS ALT2 TSL 5 BASIC1.79□□□□□ -2.12
Lima1Q9ERG0 Mir6379-201ENSMUST00000183392 115 ntBASIC1.79□□□□□ -2.12
Lima1Q9ERG0 Mir6376-201ENSMUST00000185149 131 ntBASIC1.79□□□□□ -2.12
Lima1Q9ERG0 Gm18635-201ENSMUST00000199020 1060 ntBASIC1.79□□□□□ -2.12
Lima1Q9ERG0 Gm44988-201ENSMUST00000203835 1161 ntBASIC1.79□□□□□ -2.12
Lima1Q9ERG0 Gm44954-201ENSMUST00000208513 227 ntBASIC1.79□□□□□ -2.12
Lima1Q9ERG0 AC152951.1-201ENSMUST00000218907 266 ntBASIC1.79□□□□□ -2.12
Lima1Q9ERG0 AC164567.2-201ENSMUST00000219363 445 ntBASIC1.79□□□□□ -2.12
Lima1Q9ERG0 9130015A21Rik-201ENSMUST00000221491 651 ntTSL 2 BASIC1.79□□□□□ -2.12
Lima1Q9ERG0 Gm9318-201ENSMUST00000222444 438 ntBASIC1.79□□□□□ -2.12
Lima1Q9ERG0 AC131085.1-201ENSMUST00000224746 656 ntBASIC1.79□□□□□ -2.12
Lima1Q9ERG0 AC183092.2-201ENSMUST00000225542 1153 ntBASIC1.79□□□□□ -2.12
Lima1Q9ERG0 Gm25755-201ENSMUST00000083396 107 ntBASIC1.79□□□□□ -2.12
Lima1Q9ERG0 Olfr1102-202ENSMUST00000214002 1806 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
Lima1Q9ERG0 Vmn1r29-202ENSMUST00000226971 4714 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
Lima1Q9ERG0 Gm12016-201ENSMUST00000119079 681 ntBASIC1.78□□□□□ -2.12
Lima1Q9ERG0 Gm13482-201ENSMUST00000119842 254 ntBASIC1.78□□□□□ -2.12
Lima1Q9ERG0 Gm6806-201ENSMUST00000120092 1006 ntBASIC1.78□□□□□ -2.12
Lima1Q9ERG0 Rpl23a-ps13-201ENSMUST00000120350 441 ntBASIC1.78□□□□□ -2.12
Lima1Q9ERG0 Gm12096-201ENSMUST00000121149 829 ntBASIC1.78□□□□□ -2.12
Lima1Q9ERG0 Gm43439-201ENSMUST00000138710 322 ntTSL 3 BASIC1.78□□□□□ -2.12
Lima1Q9ERG0 Gm13184-201ENSMUST00000149932 626 ntTSL 3 BASIC1.78□□□□□ -2.12
Lima1Q9ERG0 Gm16349-201ENSMUST00000149990 394 ntTSL 3 BASIC1.78□□□□□ -2.12
Lima1Q9ERG0 Gm25658-201ENSMUST00000158472 128 ntBASIC1.78□□□□□ -2.12
Lima1Q9ERG0 Vmn1r18-201ENSMUST00000164732 1087 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
Lima1Q9ERG0 Gm9892-201ENSMUST00000182415 992 ntBASIC1.78□□□□□ -2.12
Lima1Q9ERG0 Ighv1-46-201ENSMUST00000193988 351 ntBASIC1.78□□□□□ -2.12
Lima1Q9ERG0 Gm33354-201ENSMUST00000195448 906 ntBASIC1.78□□□□□ -2.12
Lima1Q9ERG0 Gm43431-201ENSMUST00000198577 340 ntBASIC1.78□□□□□ -2.12
Lima1Q9ERG0 Gm44256-201ENSMUST00000203304 335 ntBASIC1.78□□□□□ -2.12
Lima1Q9ERG0 Gm44133-201ENSMUST00000203823 701 ntTSL 2 BASIC1.78□□□□□ -2.12
Lima1Q9ERG0 Gm7039-201ENSMUST00000205138 346 ntBASIC1.78□□□□□ -2.12
Lima1Q9ERG0 Gm44794-201ENSMUST00000206550 411 ntBASIC1.78□□□□□ -2.12
Lima1Q9ERG0 Gm44554-201ENSMUST00000208738 147 ntBASIC1.78□□□□□ -2.12
Lima1Q9ERG0 Gm44808-201ENSMUST00000208887 264 ntTSL 5 BASIC1.78□□□□□ -2.12
Lima1Q9ERG0 Gm19140-201ENSMUST00000209790 421 ntBASIC1.78□□□□□ -2.12
Lima1Q9ERG0 Gm45344-201ENSMUST00000211610 341 ntBASIC1.78□□□□□ -2.12
Lima1Q9ERG0 Olfr802-201ENSMUST00000074713 939 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
Lima1Q9ERG0 Olfr197-201ENSMUST00000080031 926 ntBASIC1.78□□□□□ -2.12
Lima1Q9ERG0 Olfr1105-202ENSMUST00000215978 3012 ntAPPRIS P1 TSL 3 BASIC1.78□□□□□ -2.12
Lima1Q9ERG0 Gm11813-201ENSMUST00000118586 291 ntBASIC1.77□□□□□ -2.13
Lima1Q9ERG0 Gm13510-201ENSMUST00000118659 429 ntBASIC1.77□□□□□ -2.13
Lima1Q9ERG0 Gm15112-201ENSMUST00000120152 860 ntBASIC1.77□□□□□ -2.13
Lima1Q9ERG0 Gm12045-201ENSMUST00000122122 573 ntBASIC1.77□□□□□ -2.13
Lima1Q9ERG0 Gm14770-201ENSMUST00000122197 312 ntBASIC1.77□□□□□ -2.13
Lima1Q9ERG0 n-R5s189-201ENSMUST00000122675 114 ntBASIC1.77□□□□□ -2.13
Lima1Q9ERG0 Gm22891-201ENSMUST00000158641 164 ntBASIC1.77□□□□□ -2.13
Lima1Q9ERG0 Gm24878-201ENSMUST00000158782 104 ntBASIC1.77□□□□□ -2.13
Lima1Q9ERG0 Rpl30-ps6-201ENSMUST00000163337 348 ntBASIC1.77□□□□□ -2.13
Lima1Q9ERG0 Vmn2r-ps34-201ENSMUST00000177433 904 ntBASIC1.77□□□□□ -2.13
Retrieved 100 of 76,532 protein–RNA pairs in 80 ms