Protein–RNA interactions for Protein: Q9ER60

Scn4a, Sodium channel protein type 4 subunit alpha, mousemouse

Predictions only

Length 1,841 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4aQ9ER60 Gm23648-201ENSMUST00000180301 107 ntBASIC2.61□□□□□ -1.99
Scn4aQ9ER60 Gm7858-201ENSMUST00000190177 622 ntBASIC2.61□□□□□ -1.99
Scn4aQ9ER60 Trbv18-201ENSMUST00000194256 294 ntBASIC2.61□□□□□ -1.99
Scn4aQ9ER60 Gm45273-201ENSMUST00000211559 281 ntBASIC2.61□□□□□ -1.99
Scn4aQ9ER60 AC125532.1-201ENSMUST00000216210 2334 ntBASIC2.61□□□□□ -1.99
Scn4aQ9ER60 Gm9068-201ENSMUST00000217393 455 ntBASIC2.61□□□□□ -1.99
Scn4aQ9ER60 AC121844.1-201ENSMUST00000218706 137 ntBASIC2.61□□□□□ -1.99
Scn4aQ9ER60 Zfp706-205ENSMUST00000228275 481 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
Scn4aQ9ER60 Olfr340-201ENSMUST00000072854 939 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
Scn4aQ9ER60 Gm24313-201ENSMUST00000082561 133 ntBASIC2.61□□□□□ -1.99
Scn4aQ9ER60 Gm23506-201ENSMUST00000083077 107 ntBASIC2.61□□□□□ -1.99
Scn4aQ9ER60 AC115047.2-201ENSMUST00000214421 1848 ntBASIC2.61□□□□□ -1.99
Scn4aQ9ER60 Vmn1r185-211ENSMUST00000228467 6915 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
Scn4aQ9ER60 Vmn1r69-201ENSMUST00000163658 2558 ntAPPRIS P2 BASIC2.61□□□□□ -1.99
Scn4aQ9ER60 Mir883a-201ENSMUST00000104824 76 ntBASIC2.61□□□□□ -1.99
Scn4aQ9ER60 Gm14537-201ENSMUST00000117464 599 ntBASIC2.61□□□□□ -1.99
Scn4aQ9ER60 Olfr1327-ps1-201ENSMUST00000117953 835 ntBASIC2.61□□□□□ -1.99
Scn4aQ9ER60 Gm13482-201ENSMUST00000119842 254 ntBASIC2.61□□□□□ -1.99
Scn4aQ9ER60 Gm14363-201ENSMUST00000122304 409 ntBASIC2.61□□□□□ -1.99
Scn4aQ9ER60 Gm24475-201ENSMUST00000157435 143 ntBASIC2.61□□□□□ -1.99
Scn4aQ9ER60 Gm23568-201ENSMUST00000177960 92 ntBASIC2.61□□□□□ -1.99
Scn4aQ9ER60 Gm24829-201ENSMUST00000179245 92 ntBASIC2.61□□□□□ -1.99
Scn4aQ9ER60 Gm37428-201ENSMUST00000193886 137 ntBASIC2.61□□□□□ -1.99
Scn4aQ9ER60 Olfr1543-ps1-201ENSMUST00000217448 908 ntBASIC2.61□□□□□ -1.99
Scn4aQ9ER60 AC159621.1-201ENSMUST00000223249 163 ntBASIC2.61□□□□□ -1.99
Scn4aQ9ER60 Olfr914-201ENSMUST00000057755 951 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
Scn4aQ9ER60 Olfr594-202ENSMUST00000214051 2809 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
Scn4aQ9ER60 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
Scn4aQ9ER60 Mir878-201ENSMUST00000104680 78 ntBASIC2.6□□□□□ -1.99
Scn4aQ9ER60 Gm23336-201ENSMUST00000117023 123 ntBASIC2.6□□□□□ -1.99
Scn4aQ9ER60 Gm13614-201ENSMUST00000117306 503 ntBASIC2.6□□□□□ -1.99
Scn4aQ9ER60 Gm13640-201ENSMUST00000118445 264 ntBASIC2.6□□□□□ -1.99
Scn4aQ9ER60 Gm12639-201ENSMUST00000121400 493 ntBASIC2.6□□□□□ -1.99
Scn4aQ9ER60 Gm12730-201ENSMUST00000125277 291 ntTSL 5 BASIC2.6□□□□□ -1.99
Scn4aQ9ER60 Gm16225-201ENSMUST00000146152 276 ntTSL 5 BASIC2.6□□□□□ -1.99
Scn4aQ9ER60 Gm10267-202ENSMUST00000181652 341 ntAPPRIS P2 TSL 5 BASIC2.6□□□□□ -1.99
Scn4aQ9ER60 Gm4921-201ENSMUST00000219804 992 ntBASIC2.6□□□□□ -1.99
Scn4aQ9ER60 AC241593.1-201ENSMUST00000224768 397 ntBASIC2.6□□□□□ -1.99
Scn4aQ9ER60 Gm22265-201ENSMUST00000082947 116 ntBASIC2.6□□□□□ -1.99
Scn4aQ9ER60 Arhgap5-201ENSMUST00000110725 5197 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
Scn4aQ9ER60 Olfr1256-204ENSMUST00000215613 4543 ntAPPRIS P1 TSL 3 BASIC2.6□□□□□ -1.99
Scn4aQ9ER60 Rpl30-ps11-201ENSMUST00000119630 345 ntBASIC2.59□□□□□ -1.99
Scn4aQ9ER60 Gm15115-201ENSMUST00000121145 264 ntBASIC2.59□□□□□ -1.99
Scn4aQ9ER60 Gm26099-201ENSMUST00000157248 109 ntBASIC2.59□□□□□ -1.99
Scn4aQ9ER60 Gm22390-201ENSMUST00000157588 325 ntBASIC2.59□□□□□ -1.99
Scn4aQ9ER60 Gm23583-201ENSMUST00000158533 289 ntBASIC2.59□□□□□ -1.99
Scn4aQ9ER60 Gm2930-201ENSMUST00000170403 474 ntBASIC2.59□□□□□ -1.99
Scn4aQ9ER60 Gm27869-201ENSMUST00000184327 122 ntBASIC2.59□□□□□ -1.99
Scn4aQ9ER60 Gm27656-201ENSMUST00000185055 80 ntBASIC2.59□□□□□ -1.99
Scn4aQ9ER60 1700010I02Rik-202ENSMUST00000188525 430 ntTSL 3 BASIC2.59□□□□□ -1.99
Scn4aQ9ER60 Gm36984-201ENSMUST00000192770 235 ntBASIC2.59□□□□□ -1.99
Scn4aQ9ER60 Gm44061-201ENSMUST00000203962 1195 ntBASIC2.59□□□□□ -1.99
Scn4aQ9ER60 Gm44520-201ENSMUST00000205447 802 ntBASIC2.59□□□□□ -1.99
Scn4aQ9ER60 Gm45368-201ENSMUST00000209323 703 ntTSL 5 BASIC2.59□□□□□ -1.99
Scn4aQ9ER60 Prl2c5-201ENSMUST00000021778 844 ntAPPRIS P3 TSL 1 (best) BASIC2.59□□□□□ -1.99
Scn4aQ9ER60 AC125523.1-201ENSMUST00000228018 934 ntBASIC2.59□□□□□ -1.99
Scn4aQ9ER60 Gm25107-201ENSMUST00000122472 129 ntBASIC2.58□□□□□ -2
Scn4aQ9ER60 Gm26280-201ENSMUST00000157096 101 ntBASIC2.58□□□□□ -2
Scn4aQ9ER60 Gm22727-201ENSMUST00000158090 116 ntBASIC2.58□□□□□ -2
Scn4aQ9ER60 Gm25194-201ENSMUST00000177987 79 ntBASIC2.58□□□□□ -2
Scn4aQ9ER60 Gm22131-201ENSMUST00000178415 94 ntBASIC2.58□□□□□ -2
Scn4aQ9ER60 Zfp950-206ENSMUST00000178819 171 ntBASIC2.58□□□□□ -2
Scn4aQ9ER60 Gm24863-201ENSMUST00000179499 107 ntBASIC2.58□□□□□ -2
Scn4aQ9ER60 Gm27659-201ENSMUST00000183472 98 ntBASIC2.58□□□□□ -2
Scn4aQ9ER60 Gm29192-201ENSMUST00000190942 377 ntBASIC2.58□□□□□ -2
Scn4aQ9ER60 4930449A18Rik-202ENSMUST00000192453 1200 ntBASIC2.58□□□□□ -2
Scn4aQ9ER60 AC139186.1-201ENSMUST00000197610 94 ntBASIC2.58□□□□□ -2
Scn4aQ9ER60 AC117232.1-201ENSMUST00000197964 119 ntBASIC2.58□□□□□ -2
Scn4aQ9ER60 Gm8041-201ENSMUST00000199755 616 ntBASIC2.58□□□□□ -2
Scn4aQ9ER60 Gm40292-201ENSMUST00000202383 553 ntTSL 1 (best) BASIC2.58□□□□□ -2
Scn4aQ9ER60 Gm43026-201ENSMUST00000202972 325 ntBASIC2.58□□□□□ -2
Scn4aQ9ER60 4930431P19Rik-201ENSMUST00000207570 451 ntBASIC2.58□□□□□ -2
Scn4aQ9ER60 AC154276.2-201ENSMUST00000227707 309 ntBASIC2.58□□□□□ -2
Scn4aQ9ER60 Olfr967-201ENSMUST00000069561 933 ntAPPRIS P1 BASIC2.58□□□□□ -2
Scn4aQ9ER60 Gm25755-201ENSMUST00000083396 107 ntBASIC2.58□□□□□ -2
Scn4aQ9ER60 1110057P08Rik-201ENSMUST00000089097 465 ntAPPRIS P1 BASIC2.58□□□□□ -2
Scn4aQ9ER60 Defb41-202ENSMUST00000097817 198 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Scn4aQ9ER60 Olfr937-202ENSMUST00000215049 2259 ntAPPRIS P1 TSL 3 BASIC2.58□□□□□ -2
Scn4aQ9ER60 Gm25088-201ENSMUST00000101803 79 ntBASIC2.58□□□□□ -2
Scn4aQ9ER60 Igkv13-84-201ENSMUST00000103339 347 ntAPPRIS P1 BASIC2.58□□□□□ -2
Scn4aQ9ER60 Igkv13-85-201ENSMUST00000114212 347 ntAPPRIS P1 BASIC2.58□□□□□ -2
Scn4aQ9ER60 Gm14932-201ENSMUST00000117112 453 ntBASIC2.58□□□□□ -2
Scn4aQ9ER60 Gm14657-201ENSMUST00000117461 302 ntBASIC2.58□□□□□ -2
Scn4aQ9ER60 Gm14007-201ENSMUST00000118288 210 ntBASIC2.58□□□□□ -2
Scn4aQ9ER60 Gm26173-201ENSMUST00000158416 136 ntBASIC2.58□□□□□ -2
Scn4aQ9ER60 Gm44881-201ENSMUST00000205425 367 ntBASIC2.58□□□□□ -2
Scn4aQ9ER60 Gm45636-201ENSMUST00000210497 1064 ntBASIC2.58□□□□□ -2
Scn4aQ9ER60 AC158803.1-201ENSMUST00000219495 316 ntBASIC2.58□□□□□ -2
Scn4aQ9ER60 Gm10337-201ENSMUST00000096145 165 ntAPPRIS P1 BASIC2.58□□□□□ -2
Scn4aQ9ER60 Knl1-203ENSMUST00000099542 6525 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Scn4aQ9ER60 Olfr1487-203ENSMUST00000209005 2061 ntTSL 3 BASIC2.57□□□□□ -2
Scn4aQ9ER60 Atp11c-205ENSMUST00000154051 6039 ntTSL 5 BASIC2.57□□□□□ -2
Scn4aQ9ER60 Gm13574-201ENSMUST00000120482 394 ntBASIC2.57□□□□□ -2
Scn4aQ9ER60 Gm25294-201ENSMUST00000122791 104 ntBASIC2.57□□□□□ -2
Scn4aQ9ER60 Gm23470-201ENSMUST00000157129 120 ntBASIC2.57□□□□□ -2
Scn4aQ9ER60 Gm25413-201ENSMUST00000158544 312 ntBASIC2.57□□□□□ -2
Scn4aQ9ER60 Gm23340-201ENSMUST00000158955 123 ntBASIC2.57□□□□□ -2
Scn4aQ9ER60 Gm17377-201ENSMUST00000165184 207 ntBASIC2.57□□□□□ -2
Scn4aQ9ER60 Igkv13-61-1-201ENSMUST00000198255 296 ntBASIC2.57□□□□□ -2
Scn4aQ9ER60 Olfr278-ps1-201ENSMUST00000205676 238 ntBASIC2.57□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 84.9 ms