Protein–RNA interactions for Protein: Q9EPU4

Cpsf1, Cleavage and polyadenylation specificity factor subunit 1, mousemouse

Known RBP Predictions only

Length 1,441 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf1Q9EPU4 Olfr136-204ENSMUST00000214035 1925 ntAPPRIS P1 TSL 5 BASIC1.13□□□□□ -2.23
Cpsf1Q9EPU4 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC1.13□□□□□ -2.23
Cpsf1Q9EPU4 Vmn2r-ps80-201ENSMUST00000173697 914 ntBASIC1.13□□□□□ -2.23
Cpsf1Q9EPU4 Gm29516-201ENSMUST00000190402 468 ntBASIC1.13□□□□□ -2.23
Cpsf1Q9EPU4 Gm25683-201ENSMUST00000083940 131 ntBASIC1.13□□□□□ -2.23
Cpsf1Q9EPU4 Olfr1220-201ENSMUST00000099789 1026 ntAPPRIS P1 BASIC1.13□□□□□ -2.23
Cpsf1Q9EPU4 Olfr1220-202ENSMUST00000099806 1201 ntAPPRIS P1 TSL 3 BASIC1.13□□□□□ -2.23
Cpsf1Q9EPU4 Olfr1496-202ENSMUST00000209137 2394 ntAPPRIS ALT1 TSL 5 BASIC1.12□□□□□ -2.23
Cpsf1Q9EPU4 Traj39-201ENSMUST00000103703 63 ntAPPRIS P1 BASIC1.12□□□□□ -2.23
Cpsf1Q9EPU4 Gm14073-201ENSMUST00000117344 381 ntBASIC1.12□□□□□ -2.23
Cpsf1Q9EPU4 Gm13541-201ENSMUST00000119519 283 ntBASIC1.12□□□□□ -2.23
Cpsf1Q9EPU4 Gm22957-201ENSMUST00000122511 123 ntBASIC1.12□□□□□ -2.23
Cpsf1Q9EPU4 Gm15632-201ENSMUST00000135936 246 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
Cpsf1Q9EPU4 Vmn1r-ps69-201ENSMUST00000172759 201 ntBASIC1.12□□□□□ -2.23
Cpsf1Q9EPU4 Gm24304-201ENSMUST00000177635 107 ntBASIC1.12□□□□□ -2.23
Cpsf1Q9EPU4 Gtpbp4-ps5-201ENSMUST00000184969 289 ntBASIC1.12□□□□□ -2.23
Cpsf1Q9EPU4 Gm18546-201ENSMUST00000197245 676 ntBASIC1.12□□□□□ -2.23
Cpsf1Q9EPU4 Gm42774-201ENSMUST00000198854 283 ntBASIC1.12□□□□□ -2.23
Cpsf1Q9EPU4 CT010455.1-201ENSMUST00000218579 413 ntBASIC1.12□□□□□ -2.23
Cpsf1Q9EPU4 Lilr4b-211ENSMUST00000219661 1143 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
Cpsf1Q9EPU4 AC121569.2-201ENSMUST00000222557 574 ntTSL 2 BASIC1.12□□□□□ -2.23
Cpsf1Q9EPU4 AC165284.1-201ENSMUST00000228614 458 ntBASIC1.12□□□□□ -2.23
Cpsf1Q9EPU4 n-R5s79-201ENSMUST00000083071 120 ntBASIC1.12□□□□□ -2.23
Cpsf1Q9EPU4 Gm8217-201ENSMUST00000119136 465 ntBASIC1.11□□□□□ -2.23
Cpsf1Q9EPU4 Gm5287-201ENSMUST00000120666 598 ntBASIC1.11□□□□□ -2.23
Cpsf1Q9EPU4 Gm26105-201ENSMUST00000157253 190 ntBASIC1.11□□□□□ -2.23
Cpsf1Q9EPU4 Gm10074-201ENSMUST00000174543 249 ntBASIC1.11□□□□□ -2.23
Cpsf1Q9EPU4 Gm23355-201ENSMUST00000177614 107 ntBASIC1.11□□□□□ -2.23
Cpsf1Q9EPU4 Gm27722-201ENSMUST00000183908 76 ntBASIC1.11□□□□□ -2.23
Cpsf1Q9EPU4 1700022E09Rik-201ENSMUST00000185295 299 ntTSL 5 BASIC1.11□□□□□ -2.23
Cpsf1Q9EPU4 Gm20118-201ENSMUST00000187207 162 ntBASIC1.11□□□□□ -2.23
Cpsf1Q9EPU4 Gm42625-201ENSMUST00000198611 922 ntBASIC1.11□□□□□ -2.23
Cpsf1Q9EPU4 Olfr138-201ENSMUST00000071871 939 ntAPPRIS P1 BASIC1.11□□□□□ -2.23
Cpsf1Q9EPU4 Gm23721-201ENSMUST00000083005 107 ntBASIC1.11□□□□□ -2.23
Cpsf1Q9EPU4 Zfp980-202ENSMUST00000180014 1938 ntAPPRIS P1 TSL 2 BASIC1.11□□□□□ -2.23
Cpsf1Q9EPU4 Mndal-204ENSMUST00000188804 2026 ntAPPRIS P2 TSL 1 (best) BASIC1.1□□□□□ -2.23
Cpsf1Q9EPU4 Trbv17-201ENSMUST00000103275 374 ntAPPRIS P1 BASIC1.1□□□□□ -2.23
Cpsf1Q9EPU4 Gm14885-201ENSMUST00000117969 496 ntBASIC1.1□□□□□ -2.23
Cpsf1Q9EPU4 Gm14128-201ENSMUST00000119514 1011 ntBASIC1.1□□□□□ -2.23
Cpsf1Q9EPU4 Gm11785-201ENSMUST00000120165 601 ntBASIC1.1□□□□□ -2.23
Cpsf1Q9EPU4 4930579O11Rik-202ENSMUST00000168243 672 ntTSL 3 BASIC1.1□□□□□ -2.23
Cpsf1Q9EPU4 Gm14435-203ENSMUST00000172025 192 ntTSL 5 BASIC1.1□□□□□ -2.23
Cpsf1Q9EPU4 Gm25996-201ENSMUST00000175393 117 ntBASIC1.1□□□□□ -2.23
Cpsf1Q9EPU4 Gm26960-201ENSMUST00000182263 412 ntBASIC1.1□□□□□ -2.23
Cpsf1Q9EPU4 Gm42533-201ENSMUST00000196247 157 ntBASIC1.1□□□□□ -2.23
Cpsf1Q9EPU4 Gm45375-201ENSMUST00000210338 280 ntBASIC1.1□□□□□ -2.23
Cpsf1Q9EPU4 Gm14440-201ENSMUST00000098998 192 ntTSL 5 BASIC1.1□□□□□ -2.23
Cpsf1Q9EPU4 Sult2a8-203ENSMUST00000168252 2097 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
Cpsf1Q9EPU4 Olfr867-202ENSMUST00000212098 4228 ntTSL 3 BASIC1.1□□□□□ -2.23
Cpsf1Q9EPU4 C030005K15Rik-201ENSMUST00000166373 1882 ntAPPRIS P1 BASIC1.1□□□□□ -2.23
Cpsf1Q9EPU4 Gm22689-201ENSMUST00000102452 110 ntBASIC1.09□□□□□ -2.23
Cpsf1Q9EPU4 Gm23708-201ENSMUST00000104367 123 ntBASIC1.09□□□□□ -2.23
Cpsf1Q9EPU4 Gm15215-201ENSMUST00000117773 489 ntBASIC1.09□□□□□ -2.23
Cpsf1Q9EPU4 Gm14898-201ENSMUST00000120202 645 ntBASIC1.09□□□□□ -2.23
Cpsf1Q9EPU4 Gm14907-201ENSMUST00000121948 854 ntBASIC1.09□□□□□ -2.23
Cpsf1Q9EPU4 4933411O13Rik-202ENSMUST00000140815 370 ntTSL 3 BASIC1.09□□□□□ -2.23
Cpsf1Q9EPU4 Gm17085-201ENSMUST00000165425 502 ntBASIC1.09□□□□□ -2.23
Cpsf1Q9EPU4 Gm43680-201ENSMUST00000199466 340 ntBASIC1.09□□□□□ -2.23
Cpsf1Q9EPU4 AC027184.1-201ENSMUST00000226991 424 ntBASIC1.09□□□□□ -2.23
Cpsf1Q9EPU4 Gm24920-201ENSMUST00000083018 85 ntBASIC1.09□□□□□ -2.23
Cpsf1Q9EPU4 Olfr835-202ENSMUST00000213018 2690 ntAPPRIS P1 TSL 5 BASIC1.08□□□□□ -2.24
Cpsf1Q9EPU4 Gm24951-201ENSMUST00000102182 109 ntBASIC1.08□□□□□ -2.24
Cpsf1Q9EPU4 Gm25495-201ENSMUST00000104431 131 ntBASIC1.08□□□□□ -2.24
Cpsf1Q9EPU4 1700010K23Rik-201ENSMUST00000174502 376 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
Cpsf1Q9EPU4 Gm34015-201ENSMUST00000194908 451 ntBASIC1.08□□□□□ -2.24
Cpsf1Q9EPU4 Gm38274-201ENSMUST00000195689 148 ntBASIC1.08□□□□□ -2.24
Cpsf1Q9EPU4 Gm43096-201ENSMUST00000196173 421 ntBASIC1.08□□□□□ -2.24
Cpsf1Q9EPU4 AC147560.1-201ENSMUST00000197528 107 ntBASIC1.08□□□□□ -2.24
Cpsf1Q9EPU4 Olfr183-201ENSMUST00000073320 2040 ntAPPRIS P1 TSL 2 BASIC1.08□□□□□ -2.24
Cpsf1Q9EPU4 Vmn1r75-206ENSMUST00000228463 6508 ntAPPRIS P2 BASIC1.08□□□□□ -2.24
Cpsf1Q9EPU4 Gm22270-201ENSMUST00000104034 132 ntBASIC1.07□□□□□ -2.24
Cpsf1Q9EPU4 Gm16411-201ENSMUST00000122164 1100 ntBASIC1.07□□□□□ -2.24
Cpsf1Q9EPU4 Gm24262-201ENSMUST00000157431 144 ntBASIC1.07□□□□□ -2.24
Cpsf1Q9EPU4 Mir5101-201ENSMUST00000175181 83 ntBASIC1.07□□□□□ -2.24
Cpsf1Q9EPU4 Gm24323-201ENSMUST00000175342 77 ntBASIC1.07□□□□□ -2.24
Cpsf1Q9EPU4 Gm26897-201ENSMUST00000180627 93 ntAPPRIS P1 TSL 5 BASIC1.07□□□□□ -2.24
Cpsf1Q9EPU4 Gm44358-201ENSMUST00000196301 98 ntBASIC1.07□□□□□ -2.24
Cpsf1Q9EPU4 Olfr962-ps1-201ENSMUST00000217332 442 ntBASIC1.07□□□□□ -2.24
Cpsf1Q9EPU4 AC122465.3-201ENSMUST00000221644 355 ntBASIC1.07□□□□□ -2.24
Cpsf1Q9EPU4 CT030166.1-201ENSMUST00000222654 357 ntBASIC1.07□□□□□ -2.24
Cpsf1Q9EPU4 Sval1-201ENSMUST00000031898 615 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
Cpsf1Q9EPU4 Tas2r139-201ENSMUST00000057686 960 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
Cpsf1Q9EPU4 Olfr843-201ENSMUST00000061365 1107 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
Cpsf1Q9EPU4 Gm25038-201ENSMUST00000082928 130 ntBASIC1.07□□□□□ -2.24
Cpsf1Q9EPU4 Rpl30-ps10-201ENSMUST00000117119 347 ntBASIC1.06□□□□□ -2.24
Cpsf1Q9EPU4 Gm26348-201ENSMUST00000157528 240 ntBASIC1.06□□□□□ -2.24
Cpsf1Q9EPU4 Gm23124-201ENSMUST00000157650 107 ntBASIC1.06□□□□□ -2.24
Cpsf1Q9EPU4 Gm26414-201ENSMUST00000157674 269 ntBASIC1.06□□□□□ -2.24
Cpsf1Q9EPU4 Gm22663-201ENSMUST00000158721 102 ntBASIC1.06□□□□□ -2.24
Cpsf1Q9EPU4 Gm25247-201ENSMUST00000175475 90 ntBASIC1.06□□□□□ -2.24
Cpsf1Q9EPU4 Gm21797-201ENSMUST00000177579 543 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
Cpsf1Q9EPU4 Gm21767-201ENSMUST00000178689 543 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
Cpsf1Q9EPU4 Gm21822-201ENSMUST00000179302 543 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
Cpsf1Q9EPU4 4932441J04Rik-201ENSMUST00000180708 729 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
Cpsf1Q9EPU4 Gm37418-201ENSMUST00000195031 274 ntBASIC1.06□□□□□ -2.24
Cpsf1Q9EPU4 AC153506.2-201ENSMUST00000218051 257 ntBASIC1.06□□□□□ -2.24
Cpsf1Q9EPU4 Olfr812-203ENSMUST00000205013 1718 ntAPPRIS P1 TSL 5 BASIC1.06□□□□□ -2.24
Cpsf1Q9EPU4 Olfr498-201ENSMUST00000217616 2260 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
Cpsf1Q9EPU4 Gm23887-201ENSMUST00000122683 172 ntBASIC1.06□□□□□ -2.24
Cpsf1Q9EPU4 Mup-ps12-201ENSMUST00000126217 549 ntBASIC1.06□□□□□ -2.24
Retrieved 100 of 76,532 protein–RNA pairs in 124.8 ms