Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Gm44715-201ENSMUST00000209049 3839 ntBASIC3.83□□□□□ -1.8
U2af1Q9D883 Mroh9-201ENSMUST00000096608 2956 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
U2af1Q9D883 Trav16n-201ENSMUST00000103633 353 ntAPPRIS ALT2 BASIC3.83□□□□□ -1.8
U2af1Q9D883 Rpl23a-ps13-201ENSMUST00000120350 441 ntBASIC3.83□□□□□ -1.8
U2af1Q9D883 Gm12272-201ENSMUST00000138136 333 ntTSL 5 BASIC3.83□□□□□ -1.8
U2af1Q9D883 Gm13601-201ENSMUST00000142314 404 ntTSL 3 BASIC3.83□□□□□ -1.8
U2af1Q9D883 Gm26214-201ENSMUST00000158581 107 ntBASIC3.83□□□□□ -1.8
U2af1Q9D883 Gm15914-201ENSMUST00000161922 309 ntBASIC3.83□□□□□ -1.8
U2af1Q9D883 Gm20794-201ENSMUST00000177626 628 ntBASIC3.83□□□□□ -1.8
U2af1Q9D883 Gm28271-201ENSMUST00000191369 351 ntTSL 3 BASIC3.83□□□□□ -1.8
U2af1Q9D883 Gm38050-201ENSMUST00000191904 238 ntBASIC3.83□□□□□ -1.8
U2af1Q9D883 Gm36992-201ENSMUST00000195463 428 ntTSL 3 BASIC3.83□□□□□ -1.8
U2af1Q9D883 4930584F24Rik-203ENSMUST00000197091 954 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
U2af1Q9D883 Igkv12-49-201ENSMUST00000197714 278 ntBASIC3.83□□□□□ -1.8
U2af1Q9D883 Gm44520-201ENSMUST00000205447 802 ntBASIC3.83□□□□□ -1.8
U2af1Q9D883 Gm45312-201ENSMUST00000210566 311 ntBASIC3.83□□□□□ -1.8
U2af1Q9D883 AC164567.2-201ENSMUST00000219363 445 ntBASIC3.83□□□□□ -1.8
U2af1Q9D883 Gm20102-201ENSMUST00000222445 220 ntBASIC3.83□□□□□ -1.8
U2af1Q9D883 AC124537.1-201ENSMUST00000222890 159 ntBASIC3.83□□□□□ -1.8
U2af1Q9D883 Ear2-201ENSMUST00000074839 719 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
U2af1Q9D883 Gm43230-201ENSMUST00000200980 2129 ntBASIC3.83□□□□□ -1.8
U2af1Q9D883 Vmn2r-ps83-201ENSMUST00000173787 2368 ntBASIC3.83□□□□□ -1.8
U2af1Q9D883 Ogn-201ENSMUST00000021822 2566 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
U2af1Q9D883 Olfr65-203ENSMUST00000214300 2855 ntAPPRIS ALT1 TSL 5 BASIC3.83□□□□□ -1.8
U2af1Q9D883 Gm42684-201ENSMUST00000197663 3615 ntBASIC3.83□□□□□ -1.8
U2af1Q9D883 Olfr136-203ENSMUST00000208539 1773 ntAPPRIS P1 TSL 3 BASIC3.82□□□□□ -1.8
U2af1Q9D883 Gm21897-201ENSMUST00000178312 1500 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
U2af1Q9D883 Snord116l9-201ENSMUST00000101891 94 ntBASIC3.82□□□□□ -1.8
U2af1Q9D883 Gm26504-201ENSMUST00000102033 94 ntBASIC3.82□□□□□ -1.8
U2af1Q9D883 Gm25466-201ENSMUST00000103995 132 ntBASIC3.82□□□□□ -1.8
U2af1Q9D883 Gm23183-201ENSMUST00000122595 323 ntBASIC3.82□□□□□ -1.8
U2af1Q9D883 Gm24839-201ENSMUST00000122602 107 ntBASIC3.82□□□□□ -1.8
U2af1Q9D883 Gm23886-201ENSMUST00000122684 313 ntBASIC3.82□□□□□ -1.8
U2af1Q9D883 Gm26414-201ENSMUST00000157674 269 ntBASIC3.82□□□□□ -1.8
U2af1Q9D883 Gm17148-201ENSMUST00000164702 249 ntBASIC3.82□□□□□ -1.8
U2af1Q9D883 Gm26502-201ENSMUST00000177732 94 ntBASIC3.82□□□□□ -1.8
U2af1Q9D883 Snord116l13-201ENSMUST00000177737 94 ntBASIC3.82□□□□□ -1.8
U2af1Q9D883 Gm25350-201ENSMUST00000177849 94 ntBASIC3.82□□□□□ -1.8
U2af1Q9D883 Snord116l15-201ENSMUST00000177940 94 ntBASIC3.82□□□□□ -1.8
U2af1Q9D883 Gm23446-201ENSMUST00000177977 94 ntBASIC3.82□□□□□ -1.8
U2af1Q9D883 Snord116l4-201ENSMUST00000177982 94 ntBASIC3.82□□□□□ -1.8
U2af1Q9D883 Gm26201-201ENSMUST00000178047 94 ntBASIC3.82□□□□□ -1.8
U2af1Q9D883 Gm24711-201ENSMUST00000178062 94 ntBASIC3.82□□□□□ -1.8
U2af1Q9D883 Gm24609-201ENSMUST00000178166 94 ntBASIC3.82□□□□□ -1.8
U2af1Q9D883 Gm23265-201ENSMUST00000178321 94 ntBASIC3.82□□□□□ -1.8
U2af1Q9D883 Gm22812-201ENSMUST00000178329 94 ntBASIC3.82□□□□□ -1.8
U2af1Q9D883 Snord116l3-201ENSMUST00000178370 94 ntBASIC3.82□□□□□ -1.8
U2af1Q9D883 Gm26246-201ENSMUST00000178388 94 ntBASIC3.82□□□□□ -1.8
U2af1Q9D883 Gm25155-201ENSMUST00000178450 94 ntBASIC3.82□□□□□ -1.8
U2af1Q9D883 Gm24760-201ENSMUST00000178530 94 ntBASIC3.82□□□□□ -1.8
U2af1Q9D883 Gm22285-201ENSMUST00000178576 94 ntBASIC3.82□□□□□ -1.8
U2af1Q9D883 Gm22417-201ENSMUST00000178656 94 ntBASIC3.82□□□□□ -1.8
U2af1Q9D883 Snord116l2-201ENSMUST00000178675 94 ntBASIC3.82□□□□□ -1.8
U2af1Q9D883 Gm26270-201ENSMUST00000178690 94 ntBASIC3.82□□□□□ -1.8
U2af1Q9D883 Trav7d-4-201ENSMUST00000178768 451 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
U2af1Q9D883 Snord116l16-201ENSMUST00000178777 94 ntBASIC3.82□□□□□ -1.8
U2af1Q9D883 Gm23313-201ENSMUST00000178931 94 ntBASIC3.82□□□□□ -1.8
U2af1Q9D883 Snord116l17-201ENSMUST00000178936 94 ntBASIC3.82□□□□□ -1.8
U2af1Q9D883 Gm23089-201ENSMUST00000178947 94 ntBASIC3.82□□□□□ -1.8
U2af1Q9D883 Snord116l10-201ENSMUST00000179053 94 ntBASIC3.82□□□□□ -1.8
U2af1Q9D883 Gm21893-201ENSMUST00000179119 397 ntBASIC3.82□□□□□ -1.8
U2af1Q9D883 Gm24153-201ENSMUST00000179280 94 ntBASIC3.82□□□□□ -1.8
U2af1Q9D883 Gm25597-201ENSMUST00000179388 94 ntBASIC3.82□□□□□ -1.8
U2af1Q9D883 Snord116l1-201ENSMUST00000179518 94 ntBASIC3.82□□□□□ -1.8
U2af1Q9D883 Gm25816-201ENSMUST00000179764 94 ntBASIC3.82□□□□□ -1.8
U2af1Q9D883 Snord116l8-201ENSMUST00000179889 94 ntBASIC3.82□□□□□ -1.8
U2af1Q9D883 Snord116l7-201ENSMUST00000179895 94 ntBASIC3.82□□□□□ -1.8
U2af1Q9D883 Snord116l5-201ENSMUST00000179927 94 ntBASIC3.82□□□□□ -1.8
U2af1Q9D883 Snord116l6-201ENSMUST00000179955 94 ntBASIC3.82□□□□□ -1.8
U2af1Q9D883 Gm26188-201ENSMUST00000179963 94 ntBASIC3.82□□□□□ -1.8
U2af1Q9D883 Gm26433-201ENSMUST00000180227 94 ntBASIC3.82□□□□□ -1.8
U2af1Q9D883 Snord116l11-201ENSMUST00000180312 94 ntBASIC3.82□□□□□ -1.8
U2af1Q9D883 Gm22128-201ENSMUST00000180346 94 ntBASIC3.82□□□□□ -1.8
U2af1Q9D883 Trav7-4-201ENSMUST00000181728 451 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
U2af1Q9D883 Gm29633-204ENSMUST00000187737 675 ntTSL 5 BASIC3.82□□□□□ -1.8
U2af1Q9D883 Gm29335-201ENSMUST00000188361 459 ntBASIC3.82□□□□□ -1.8
U2af1Q9D883 Gm33501-202ENSMUST00000209983 706 ntTSL 5 BASIC3.82□□□□□ -1.8
U2af1Q9D883 Gm46233-201ENSMUST00000217831 449 ntBASIC3.82□□□□□ -1.8
U2af1Q9D883 Gm25856-201ENSMUST00000082786 75 ntBASIC3.82□□□□□ -1.8
U2af1Q9D883 Olfr1002-201ENSMUST00000099920 957 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
U2af1Q9D883 Zbtb41-201ENSMUST00000039867 8361 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
U2af1Q9D883 Gm38083-201ENSMUST00000194758 3498 ntBASIC3.82□□□□□ -1.8
U2af1Q9D883 Olfr896-ps1-202ENSMUST00000215219 2878 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
U2af1Q9D883 AC154386.1-201ENSMUST00000222753 2871 ntBASIC3.82□□□□□ -1.8
U2af1Q9D883 Olfr810-203ENSMUST00000214878 4709 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
U2af1Q9D883 Olfr1222-202ENSMUST00000214027 2393 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
U2af1Q9D883 Gm8978-201ENSMUST00000124230 2224 ntTSL 5 BASIC3.82□□□□□ -1.8
U2af1Q9D883 Gm37320-201ENSMUST00000192781 4953 ntBASIC3.81□□□□□ -1.8
U2af1Q9D883 Olfr1313-203ENSMUST00000216071 2599 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
U2af1Q9D883 Gm43663-201ENSMUST00000198643 1505 ntBASIC3.81□□□□□ -1.8
U2af1Q9D883 Gm45130-201ENSMUST00000207574 3388 ntBASIC3.81□□□□□ -1.8
U2af1Q9D883 Pak3-202ENSMUST00000112863 8657 ntAPPRIS ALT1 TSL 5 BASIC3.81□□□□□ -1.8
U2af1Q9D883 Olfr878-203ENSMUST00000214263 4003 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
U2af1Q9D883 Vmn1r185-206ENSMUST00000227479 6525 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
U2af1Q9D883 Traj44-201ENSMUST00000103698 61 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
U2af1Q9D883 Gm26396-201ENSMUST00000104093 132 ntBASIC3.81□□□□□ -1.8
U2af1Q9D883 Gm28305-201ENSMUST00000147249 365 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
U2af1Q9D883 Gm25373-201ENSMUST00000158156 115 ntBASIC3.81□□□□□ -1.8
U2af1Q9D883 Gm22668-201ENSMUST00000158716 260 ntBASIC3.81□□□□□ -1.8
U2af1Q9D883 Gm16289-201ENSMUST00000162079 183 ntBASIC3.81□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 84.8 ms