Protein–RNA interactions for Protein: Q9D6Y1

Ccdc3, Coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3Q9D6Y1 Gm28504-201ENSMUST00000190977 666 ntBASIC1.84□□□□□ -2.11
Ccdc3Q9D6Y1 Gm38149-201ENSMUST00000191943 339 ntBASIC1.84□□□□□ -2.11
Ccdc3Q9D6Y1 Gm31511-201ENSMUST00000193134 657 ntBASIC1.84□□□□□ -2.11
Ccdc3Q9D6Y1 Gm35843-201ENSMUST00000193716 666 ntBASIC1.84□□□□□ -2.11
Ccdc3Q9D6Y1 Gm30638-201ENSMUST00000195570 656 ntBASIC1.84□□□□□ -2.11
Ccdc3Q9D6Y1 Gm36728-201ENSMUST00000195782 665 ntBASIC1.84□□□□□ -2.11
Ccdc3Q9D6Y1 Gm3724-201ENSMUST00000197957 349 ntBASIC1.84□□□□□ -2.11
Ccdc3Q9D6Y1 AC144671.1-201ENSMUST00000215265 99 ntBASIC1.84□□□□□ -2.11
Ccdc3Q9D6Y1 AC153529.1-201ENSMUST00000217818 370 ntBASIC1.84□□□□□ -2.11
Ccdc3Q9D6Y1 AC141895.1-201ENSMUST00000218141 273 ntBASIC1.84□□□□□ -2.11
Ccdc3Q9D6Y1 Olfr6-204ENSMUST00000219365 951 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
Ccdc3Q9D6Y1 4930469K13Rik-203ENSMUST00000224226 243 ntAPPRIS ALT2 BASIC1.84□□□□□ -2.11
Ccdc3Q9D6Y1 Pmch-201ENSMUST00000048621 749 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
Ccdc3Q9D6Y1 Gm25755-201ENSMUST00000083396 107 ntBASIC1.84□□□□□ -2.11
Ccdc3Q9D6Y1 Gm22353-201ENSMUST00000083918 136 ntBASIC1.84□□□□□ -2.11
Ccdc3Q9D6Y1 Klra3-201ENSMUST00000088017 984 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
Ccdc3Q9D6Y1 Hsf3-202ENSMUST00000119035 2691 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
Ccdc3Q9D6Y1 Gm37761-201ENSMUST00000194989 2098 ntBASIC1.84□□□□□ -2.12
Ccdc3Q9D6Y1 Gm19541-201ENSMUST00000184488 2868 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
Ccdc3Q9D6Y1 Vmn1r-ps1-201ENSMUST00000118738 573 ntBASIC1.83□□□□□ -2.12
Ccdc3Q9D6Y1 Gm13432-201ENSMUST00000118861 241 ntBASIC1.83□□□□□ -2.12
Ccdc3Q9D6Y1 Gm13482-201ENSMUST00000119842 254 ntBASIC1.83□□□□□ -2.12
Ccdc3Q9D6Y1 Gm15279-201ENSMUST00000155593 288 ntBASIC1.83□□□□□ -2.12
Ccdc3Q9D6Y1 Gm25368-201ENSMUST00000158847 131 ntBASIC1.83□□□□□ -2.12
Ccdc3Q9D6Y1 Mir5101-201ENSMUST00000175181 83 ntBASIC1.83□□□□□ -2.12
Ccdc3Q9D6Y1 Gm20794-201ENSMUST00000177626 628 ntBASIC1.83□□□□□ -2.12
Ccdc3Q9D6Y1 Gm21095-201ENSMUST00000177775 498 ntTSL 5 BASIC1.83□□□□□ -2.12
Ccdc3Q9D6Y1 Gm21858-201ENSMUST00000177834 498 ntTSL 5 BASIC1.83□□□□□ -2.12
Ccdc3Q9D6Y1 Gm10717-206ENSMUST00000177875 675 ntTSL 5 BASIC1.83□□□□□ -2.12
Ccdc3Q9D6Y1 Gm20916-201ENSMUST00000178063 498 ntTSL 5 BASIC1.83□□□□□ -2.12
Ccdc3Q9D6Y1 Gm10717-207ENSMUST00000179264 672 ntTSL 5 BASIC1.83□□□□□ -2.12
Ccdc3Q9D6Y1 Gm21760-201ENSMUST00000179811 498 ntTSL 5 BASIC1.83□□□□□ -2.12
Ccdc3Q9D6Y1 Gm10717-208ENSMUST00000179839 681 ntTSL 5 BASIC1.83□□□□□ -2.12
Ccdc3Q9D6Y1 Gm21477-201ENSMUST00000179970 498 ntTSL 5 BASIC1.83□□□□□ -2.12
Ccdc3Q9D6Y1 Gm10717-209ENSMUST00000179982 681 ntTSL 5 BASIC1.83□□□□□ -2.12
Ccdc3Q9D6Y1 Gm21117-201ENSMUST00000180133 498 ntTSL 5 BASIC1.83□□□□□ -2.12
Ccdc3Q9D6Y1 Gm20855-201ENSMUST00000180170 498 ntTSL 5 BASIC1.83□□□□□ -2.12
Ccdc3Q9D6Y1 Gm20931-201ENSMUST00000180249 498 ntTSL 5 BASIC1.83□□□□□ -2.12
Ccdc3Q9D6Y1 Gm20896-201ENSMUST00000180332 498 ntTSL 5 BASIC1.83□□□□□ -2.12
Ccdc3Q9D6Y1 Mir7678-201ENSMUST00000185076 71 ntBASIC1.83□□□□□ -2.12
Ccdc3Q9D6Y1 Gm27979-201ENSMUST00000185126 56 ntBASIC1.83□□□□□ -2.12
Ccdc3Q9D6Y1 Gm28356-202ENSMUST00000187566 858 ntBASIC1.83□□□□□ -2.12
Ccdc3Q9D6Y1 1810007C17Rik-201ENSMUST00000187665 710 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
Ccdc3Q9D6Y1 Scgb2b14-ps-201ENSMUST00000189424 336 ntBASIC1.83□□□□□ -2.12
Ccdc3Q9D6Y1 Gm20885-201ENSMUST00000190192 654 ntBASIC1.83□□□□□ -2.12
Ccdc3Q9D6Y1 1700044K03Rik-201ENSMUST00000190201 377 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
Ccdc3Q9D6Y1 Gm37568-201ENSMUST00000191755 364 ntBASIC1.83□□□□□ -2.12
Ccdc3Q9D6Y1 Gm33571-201ENSMUST00000193271 657 ntBASIC1.83□□□□□ -2.12
Ccdc3Q9D6Y1 Gm36866-201ENSMUST00000193343 657 ntBASIC1.83□□□□□ -2.12
Ccdc3Q9D6Y1 Gm36047-201ENSMUST00000193659 657 ntBASIC1.83□□□□□ -2.12
Ccdc3Q9D6Y1 Gm20857-201ENSMUST00000194766 657 ntBASIC1.83□□□□□ -2.12
Ccdc3Q9D6Y1 Gm20858-201ENSMUST00000195459 657 ntBASIC1.83□□□□□ -2.12
Ccdc3Q9D6Y1 Igkv13-57-2-201ENSMUST00000196590 336 ntBASIC1.83□□□□□ -2.12
Ccdc3Q9D6Y1 Igkv11-114-201ENSMUST00000200013 346 ntBASIC1.83□□□□□ -2.12
Ccdc3Q9D6Y1 Gm45355-201ENSMUST00000211342 296 ntTSL 3 BASIC1.83□□□□□ -2.12
Ccdc3Q9D6Y1 Gm10717-204ENSMUST00000099056 669 ntTSL 5 BASIC1.83□□□□□ -2.12
Ccdc3Q9D6Y1 Gm27013-202ENSMUST00000205067 1436 ntBASIC1.83□□□□□ -2.12
Ccdc3Q9D6Y1 Vmn2r70-201ENSMUST00000168230 2565 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
Ccdc3Q9D6Y1 Olfr1448-203ENSMUST00000213713 4336 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
Ccdc3Q9D6Y1 Gm7489-201ENSMUST00000100666 1222 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
Ccdc3Q9D6Y1 Mir706-201ENSMUST00000102262 84 ntBASIC1.82□□□□□ -2.12
Ccdc3Q9D6Y1 Mir301b-201ENSMUST00000102333 97 ntBASIC1.82□□□□□ -2.12
Ccdc3Q9D6Y1 Gm24049-201ENSMUST00000102409 100 ntBASIC1.82□□□□□ -2.12
Ccdc3Q9D6Y1 Gm22494-201ENSMUST00000104495 128 ntBASIC1.82□□□□□ -2.12
Ccdc3Q9D6Y1 Gm11813-201ENSMUST00000118586 291 ntBASIC1.82□□□□□ -2.12
Ccdc3Q9D6Y1 Gm11935-201ENSMUST00000118608 399 ntBASIC1.82□□□□□ -2.12
Ccdc3Q9D6Y1 Gm8217-201ENSMUST00000119136 465 ntBASIC1.82□□□□□ -2.12
Ccdc3Q9D6Y1 Gm12272-201ENSMUST00000138136 333 ntTSL 5 BASIC1.82□□□□□ -2.12
Ccdc3Q9D6Y1 Gm24478-201ENSMUST00000157439 158 ntBASIC1.82□□□□□ -2.12
Ccdc3Q9D6Y1 Gm24076-201ENSMUST00000158179 94 ntBASIC1.82□□□□□ -2.12
Ccdc3Q9D6Y1 Vmn2r-ps70-201ENSMUST00000174636 302 ntBASIC1.82□□□□□ -2.12
Ccdc3Q9D6Y1 Gm8532-201ENSMUST00000179174 461 ntBASIC1.82□□□□□ -2.12
Ccdc3Q9D6Y1 Gm26779-201ENSMUST00000181101 551 ntTSL 2 BASIC1.82□□□□□ -2.12
Ccdc3Q9D6Y1 Mir7679-201ENSMUST00000183379 63 ntBASIC1.82□□□□□ -2.12
Ccdc3Q9D6Y1 Gm20058-201ENSMUST00000186939 284 ntBASIC1.82□□□□□ -2.12
Ccdc3Q9D6Y1 Gm37119-201ENSMUST00000195691 389 ntBASIC1.82□□□□□ -2.12
Ccdc3Q9D6Y1 Igkv13-76-201ENSMUST00000197621 347 ntBASIC1.82□□□□□ -2.12
Ccdc3Q9D6Y1 AC160031.2-201ENSMUST00000218242 274 ntBASIC1.82□□□□□ -2.12
Ccdc3Q9D6Y1 AC120540.1-201ENSMUST00000221879 324 ntBASIC1.82□□□□□ -2.12
Ccdc3Q9D6Y1 n-R5s79-201ENSMUST00000083071 120 ntBASIC1.82□□□□□ -2.12
Ccdc3Q9D6Y1 Gm23727-201ENSMUST00000083352 164 ntBASIC1.82□□□□□ -2.12
Ccdc3Q9D6Y1 Mir30d-201ENSMUST00000083503 82 ntBASIC1.82□□□□□ -2.12
Ccdc3Q9D6Y1 Rpl31-ps1-201ENSMUST00000085128 378 ntBASIC1.82□□□□□ -2.12
Ccdc3Q9D6Y1 Olfr629-202ENSMUST00000213906 2548 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
Ccdc3Q9D6Y1 Gm43473-201ENSMUST00000200442 5997 ntBASIC1.82□□□□□ -2.12
Ccdc3Q9D6Y1 Vmn1r19-201ENSMUST00000089830 2255 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
Ccdc3Q9D6Y1 1700017N19Rik-207ENSMUST00000190708 1945 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
Ccdc3Q9D6Y1 Gm25090-201ENSMUST00000104000 132 ntBASIC1.81□□□□□ -2.12
Ccdc3Q9D6Y1 Gm17555-201ENSMUST00000164042 1113 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
Ccdc3Q9D6Y1 Gm23813-201ENSMUST00000175153 77 ntBASIC1.81□□□□□ -2.12
Ccdc3Q9D6Y1 Gm29600-201ENSMUST00000188687 377 ntBASIC1.81□□□□□ -2.12
Ccdc3Q9D6Y1 Gm28643-201ENSMUST00000188811 356 ntTSL 5 BASIC1.81□□□□□ -2.12
Ccdc3Q9D6Y1 Gm37162-201ENSMUST00000191708 551 ntBASIC1.81□□□□□ -2.12
Ccdc3Q9D6Y1 Gm42958-201ENSMUST00000197595 318 ntBASIC1.81□□□□□ -2.12
Ccdc3Q9D6Y1 Gm5317-201ENSMUST00000204445 847 ntBASIC1.81□□□□□ -2.12
Ccdc3Q9D6Y1 Gm44472-201ENSMUST00000204922 943 ntBASIC1.81□□□□□ -2.12
Ccdc3Q9D6Y1 AL669916.3-201ENSMUST00000213855 94 ntBASIC1.81□□□□□ -2.12
Ccdc3Q9D6Y1 AL669916.6-201ENSMUST00000214610 94 ntBASIC1.81□□□□□ -2.12
Ccdc3Q9D6Y1 AL669916.4-201ENSMUST00000215976 94 ntBASIC1.81□□□□□ -2.12
Ccdc3Q9D6Y1 Olfr962-ps1-201ENSMUST00000217332 442 ntBASIC1.81□□□□□ -2.12
Retrieved 100 of 76,532 protein–RNA pairs in 95.4 ms