Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Gm22682-201ENSMUST00000083854 107 ntBASIC3.14□□□□□ -1.91
Sf3a3Q9D554 Gm25869-201ENSMUST00000083855 107 ntBASIC3.14□□□□□ -1.91
Sf3a3Q9D554 Gm24693-201ENSMUST00000083885 107 ntBASIC3.14□□□□□ -1.91
Sf3a3Q9D554 Gm26317-201ENSMUST00000083894 107 ntBASIC3.14□□□□□ -1.91
Sf3a3Q9D554 Gm22352-201ENSMUST00000083917 107 ntBASIC3.14□□□□□ -1.91
Sf3a3Q9D554 Gm24448-201ENSMUST00000083979 107 ntBASIC3.14□□□□□ -1.91
Sf3a3Q9D554 Gm22798-201ENSMUST00000083992 107 ntBASIC3.14□□□□□ -1.91
Sf3a3Q9D554 Gm26427-201ENSMUST00000093648 107 ntBASIC3.14□□□□□ -1.91
Sf3a3Q9D554 Gm22886-201ENSMUST00000093714 107 ntBASIC3.14□□□□□ -1.91
Sf3a3Q9D554 Gm22170-201ENSMUST00000097247 107 ntBASIC3.14□□□□□ -1.91
Sf3a3Q9D554 Olfr807-203ENSMUST00000217106 1788 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Sf3a3Q9D554 Gm14288-201ENSMUST00000109020 3438 ntAPPRIS P2 TSL 1 (best) BASIC3.13□□□□□ -1.91
Sf3a3Q9D554 Igkv9-129-201ENSMUST00000103308 350 ntAPPRIS ALT2 BASIC3.13□□□□□ -1.91
Sf3a3Q9D554 Trav6-7-dv9-201ENSMUST00000103638 379 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Sf3a3Q9D554 Gm14656-201ENSMUST00000120342 502 ntBASIC3.13□□□□□ -1.91
Sf3a3Q9D554 Gm11816-201ENSMUST00000142744 353 ntTSL 3 BASIC3.13□□□□□ -1.91
Sf3a3Q9D554 Gm15461-201ENSMUST00000143488 235 ntTSL 3 BASIC3.13□□□□□ -1.91
Sf3a3Q9D554 Gm22328-201ENSMUST00000158074 112 ntBASIC3.13□□□□□ -1.91
Sf3a3Q9D554 Gm25860-201ENSMUST00000158252 126 ntBASIC3.13□□□□□ -1.91
Sf3a3Q9D554 Snrpe-203ENSMUST00000166291 360 ntTSL 3 BASIC3.13□□□□□ -1.91
Sf3a3Q9D554 Gm4479-201ENSMUST00000178807 171 ntBASIC3.13□□□□□ -1.91
Sf3a3Q9D554 Mir6413-201ENSMUST00000184049 108 ntBASIC3.13□□□□□ -1.91
Sf3a3Q9D554 Gm28016-201ENSMUST00000184594 196 ntBASIC3.13□□□□□ -1.91
Sf3a3Q9D554 Mir195b-201ENSMUST00000184814 97 ntBASIC3.13□□□□□ -1.91
Sf3a3Q9D554 Gm7837-201ENSMUST00000190873 412 ntBASIC3.13□□□□□ -1.91
Sf3a3Q9D554 Gm34073-201ENSMUST00000195736 212 ntBASIC3.13□□□□□ -1.91
Sf3a3Q9D554 Gm9402-201ENSMUST00000196849 388 ntBASIC3.13□□□□□ -1.91
Sf3a3Q9D554 Gm43039-201ENSMUST00000202883 963 ntBASIC3.13□□□□□ -1.91
Sf3a3Q9D554 Gm44519-201ENSMUST00000206486 122 ntBASIC3.13□□□□□ -1.91
Sf3a3Q9D554 Olfr505-ps1-201ENSMUST00000207626 976 ntBASIC3.13□□□□□ -1.91
Sf3a3Q9D554 Gm45704-201ENSMUST00000212582 403 ntBASIC3.13□□□□□ -1.91
Sf3a3Q9D554 AC113291.1-201ENSMUST00000217557 403 ntTSL 3 BASIC3.13□□□□□ -1.91
Sf3a3Q9D554 CT485612.4-201ENSMUST00000223405 250 ntBASIC3.13□□□□□ -1.91
Sf3a3Q9D554 AC108416.2-201ENSMUST00000226792 367 ntBASIC3.13□□□□□ -1.91
Sf3a3Q9D554 AC166369.3-201ENSMUST00000227286 409 ntBASIC3.13□□□□□ -1.91
Sf3a3Q9D554 AC121898.1-201ENSMUST00000227599 288 ntBASIC3.13□□□□□ -1.91
Sf3a3Q9D554 Snord42a-201ENSMUST00000082606 65 ntBASIC3.13□□□□□ -1.91
Sf3a3Q9D554 Gm25801-201ENSMUST00000082638 106 ntBASIC3.13□□□□□ -1.91
Sf3a3Q9D554 Gm26165-201ENSMUST00000083791 138 ntBASIC3.13□□□□□ -1.91
Sf3a3Q9D554 BC100530-201ENSMUST00000096089 619 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
Sf3a3Q9D554 Gm43875-201ENSMUST00000203319 2475 ntBASIC3.13□□□□□ -1.91
Sf3a3Q9D554 Zfp534-201ENSMUST00000117638 2885 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
Sf3a3Q9D554 9230113P08Rik-201ENSMUST00000176049 1987 ntAPPRIS ALT2 TSL 2 BASIC3.12□□□□□ -1.91
Sf3a3Q9D554 AC152159.1-201ENSMUST00000226719 2769 ntBASIC3.12□□□□□ -1.91
Sf3a3Q9D554 Mir759-201ENSMUST00000103254 98 ntBASIC3.12□□□□□ -1.91
Sf3a3Q9D554 Traj24-201ENSMUST00000103717 63 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Sf3a3Q9D554 Snord66-201ENSMUST00000104051 75 ntBASIC3.12□□□□□ -1.91
Sf3a3Q9D554 Gm22779-201ENSMUST00000104085 107 ntBASIC3.12□□□□□ -1.91
Sf3a3Q9D554 Gm13761-201ENSMUST00000117238 807 ntBASIC3.12□□□□□ -1.91
Sf3a3Q9D554 Gm7327-201ENSMUST00000120925 652 ntBASIC3.12□□□□□ -1.91
Sf3a3Q9D554 Gm14980-201ENSMUST00000121247 736 ntBASIC3.12□□□□□ -1.91
Sf3a3Q9D554 Gm14678-201ENSMUST00000121396 482 ntBASIC3.12□□□□□ -1.91
Sf3a3Q9D554 Gm22613-201ENSMUST00000122679 292 ntBASIC3.12□□□□□ -1.91
Sf3a3Q9D554 Gm27592-201ENSMUST00000157729 126 ntBASIC3.12□□□□□ -1.91
Sf3a3Q9D554 Gm22840-201ENSMUST00000158444 136 ntBASIC3.12□□□□□ -1.91
Sf3a3Q9D554 Gm22174-201ENSMUST00000175050 125 ntBASIC3.12□□□□□ -1.91
Sf3a3Q9D554 Gm22692-201ENSMUST00000175055 125 ntBASIC3.12□□□□□ -1.91
Sf3a3Q9D554 Gm27634-201ENSMUST00000175060 126 ntBASIC3.12□□□□□ -1.91
Sf3a3Q9D554 Gm22460-201ENSMUST00000175269 124 ntBASIC3.12□□□□□ -1.91
Sf3a3Q9D554 Gm25535-201ENSMUST00000175364 125 ntBASIC3.12□□□□□ -1.91
Sf3a3Q9D554 Gm24365-201ENSMUST00000175384 125 ntBASIC3.12□□□□□ -1.91
Sf3a3Q9D554 Gm44310-201ENSMUST00000175424 126 ntBASIC3.12□□□□□ -1.91
Sf3a3Q9D554 Gm22639-201ENSMUST00000175591 125 ntBASIC3.12□□□□□ -1.91
Sf3a3Q9D554 Gm20673-201ENSMUST00000177167 430 ntBASIC3.12□□□□□ -1.91
Sf3a3Q9D554 Gm24979-201ENSMUST00000178626 126 ntBASIC3.12□□□□□ -1.91
Sf3a3Q9D554 Gm23793-201ENSMUST00000179396 117 ntBASIC3.12□□□□□ -1.91
Sf3a3Q9D554 Trav7d-3-201ENSMUST00000179789 402 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Sf3a3Q9D554 Gm26585-201ENSMUST00000180890 630 ntBASIC3.12□□□□□ -1.91
Sf3a3Q9D554 Gm27743-201ENSMUST00000185136 126 ntBASIC3.12□□□□□ -1.91
Sf3a3Q9D554 Gm37281-201ENSMUST00000192412 439 ntBASIC3.12□□□□□ -1.91
Sf3a3Q9D554 Gm37428-201ENSMUST00000193886 137 ntBASIC3.12□□□□□ -1.91
Sf3a3Q9D554 Ighv2-8-201ENSMUST00000193935 262 ntBASIC3.12□□□□□ -1.91
Sf3a3Q9D554 Gm37417-201ENSMUST00000195257 454 ntBASIC3.12□□□□□ -1.91
Sf3a3Q9D554 Gm36831-201ENSMUST00000196485 631 ntTSL 2 BASIC3.12□□□□□ -1.91
Sf3a3Q9D554 Igkv2-95-1-201ENSMUST00000200279 272 ntBASIC3.12□□□□□ -1.91
Sf3a3Q9D554 Gm44941-201ENSMUST00000204216 627 ntTSL 2 BASIC3.12□□□□□ -1.91
Sf3a3Q9D554 Snhg1-208ENSMUST00000206029 408 ntTSL 3 BASIC3.12□□□□□ -1.91
Sf3a3Q9D554 Gm44927-201ENSMUST00000207573 716 ntBASIC3.12□□□□□ -1.91
Sf3a3Q9D554 Gm18453-201ENSMUST00000208000 626 ntBASIC3.12□□□□□ -1.91
Sf3a3Q9D554 AC116460.1-201ENSMUST00000219040 313 ntBASIC3.12□□□□□ -1.91
Sf3a3Q9D554 AC158525.1-201ENSMUST00000223806 576 ntBASIC3.12□□□□□ -1.91
Sf3a3Q9D554 AC124489.2-201ENSMUST00000223930 589 ntBASIC3.12□□□□□ -1.91
Sf3a3Q9D554 Prl-203ENSMUST00000224228 888 ntAPPRIS ALT2 BASIC3.12□□□□□ -1.91
Sf3a3Q9D554 Gm25929-201ENSMUST00000082784 107 ntBASIC3.12□□□□□ -1.91
Sf3a3Q9D554 Mir137-201ENSMUST00000083635 73 ntBASIC3.12□□□□□ -1.91
Sf3a3Q9D554 Defb41-201ENSMUST00000088463 467 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Sf3a3Q9D554 Cp-201ENSMUST00000003714 4092 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
Sf3a3Q9D554 Vmn2r50-201ENSMUST00000074943 2586 ntAPPRIS P2 TSL 5 BASIC3.12□□□□□ -1.91
Sf3a3Q9D554 Gm37236-201ENSMUST00000193670 3249 ntBASIC3.12□□□□□ -1.91
Sf3a3Q9D554 Olfr968-202ENSMUST00000216458 4630 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Sf3a3Q9D554 Olfr807-202ENSMUST00000213379 1866 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Sf3a3Q9D554 Gm14020-201ENSMUST00000118165 662 ntBASIC3.11□□□□□ -1.91
Sf3a3Q9D554 Gm13876-201ENSMUST00000118451 261 ntBASIC3.11□□□□□ -1.91
Sf3a3Q9D554 Gm11356-201ENSMUST00000118974 192 ntBASIC3.11□□□□□ -1.91
Sf3a3Q9D554 Gm14551-201ENSMUST00000120802 256 ntBASIC3.11□□□□□ -1.91
Sf3a3Q9D554 Gm13903-201ENSMUST00000120945 193 ntBASIC3.11□□□□□ -1.91
Sf3a3Q9D554 Rps15a-ps3-201ENSMUST00000121072 395 ntBASIC3.11□□□□□ -1.91
Sf3a3Q9D554 Gm24936-201ENSMUST00000122598 247 ntBASIC3.11□□□□□ -1.91
Sf3a3Q9D554 Gm12976-202ENSMUST00000153817 412 ntTSL 3 BASIC3.11□□□□□ -1.91
Sf3a3Q9D554 Gm23557-201ENSMUST00000157820 138 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 87.7 ms