Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 Gm37337-201ENSMUST00000192601 993 ntBASIC2.97□□□□□ -1.93
Vps28Q9D1C8 Gm42825-201ENSMUST00000198883 723 ntTSL 2 BASIC2.97□□□□□ -1.93
Vps28Q9D1C8 Gm44072-201ENSMUST00000203666 383 ntTSL 3 BASIC2.97□□□□□ -1.93
Vps28Q9D1C8 Gm44157-201ENSMUST00000204720 410 ntBASIC2.97□□□□□ -1.93
Vps28Q9D1C8 Gm39388-201ENSMUST00000214502 1041 ntTSL 5 BASIC2.97□□□□□ -1.93
Vps28Q9D1C8 AC160031.2-201ENSMUST00000218242 274 ntBASIC2.97□□□□□ -1.93
Vps28Q9D1C8 Gm34408-201ENSMUST00000222104 655 ntTSL 5 BASIC2.97□□□□□ -1.93
Vps28Q9D1C8 AC130477.2-201ENSMUST00000228158 274 ntBASIC2.97□□□□□ -1.93
Vps28Q9D1C8 AC161758.2-201ENSMUST00000228513 218 ntBASIC2.97□□□□□ -1.93
Vps28Q9D1C8 Olfr849-201ENSMUST00000063923 939 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
Vps28Q9D1C8 Gm25853-201ENSMUST00000082793 132 ntBASIC2.97□□□□□ -1.93
Vps28Q9D1C8 Gm26166-201ENSMUST00000083788 107 ntBASIC2.97□□□□□ -1.93
Vps28Q9D1C8 Ranbp2-201ENSMUST00000003310 9608 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
Vps28Q9D1C8 Olfr110-201ENSMUST00000168318 1639 ntAPPRIS P1 TSL 2 BASIC2.97□□□□□ -1.93
Vps28Q9D1C8 Olfr844-202ENSMUST00000220268 1686 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
Vps28Q9D1C8 Pak3-203ENSMUST00000112864 8612 ntAPPRIS P3 TSL 1 (best) BASIC2.96□□□□□ -1.94
Vps28Q9D1C8 Gm22270-201ENSMUST00000104034 132 ntBASIC2.96□□□□□ -1.94
Vps28Q9D1C8 Gm9009-201ENSMUST00000117321 326 ntBASIC2.96□□□□□ -1.94
Vps28Q9D1C8 Gm9850-201ENSMUST00000117916 227 ntBASIC2.96□□□□□ -1.94
Vps28Q9D1C8 Gm13355-201ENSMUST00000117996 317 ntBASIC2.96□□□□□ -1.94
Vps28Q9D1C8 Gm16021-201ENSMUST00000121176 219 ntBASIC2.96□□□□□ -1.94
Vps28Q9D1C8 Gm15008-201ENSMUST00000147429 460 ntTSL 3 BASIC2.96□□□□□ -1.94
Vps28Q9D1C8 Ighv1-28-201ENSMUST00000192987 351 ntBASIC2.96□□□□□ -1.94
Vps28Q9D1C8 Gm38238-201ENSMUST00000194334 346 ntBASIC2.96□□□□□ -1.94
Vps28Q9D1C8 Gm36551-201ENSMUST00000196787 300 ntTSL 5 BASIC2.96□□□□□ -1.94
Vps28Q9D1C8 Gm44393-201ENSMUST00000197418 138 ntBASIC2.96□□□□□ -1.94
Vps28Q9D1C8 Gm43550-201ENSMUST00000200597 303 ntBASIC2.96□□□□□ -1.94
Vps28Q9D1C8 Gm44524-201ENSMUST00000203899 271 ntBASIC2.96□□□□□ -1.94
Vps28Q9D1C8 Gm30534-201ENSMUST00000217928 207 ntBASIC2.96□□□□□ -1.94
Vps28Q9D1C8 AC124346.1-201ENSMUST00000218539 364 ntBASIC2.96□□□□□ -1.94
Vps28Q9D1C8 Olfr348-201ENSMUST00000056865 942 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
Vps28Q9D1C8 Olfr235-201ENSMUST00000073507 1079 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
Vps28Q9D1C8 Gm23454-201ENSMUST00000083332 133 ntBASIC2.96□□□□□ -1.94
Vps28Q9D1C8 Gm38162-201ENSMUST00000195562 4597 ntBASIC2.96□□□□□ -1.94
Vps28Q9D1C8 Zbtb37-203ENSMUST00000162226 18814 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
Vps28Q9D1C8 Olfr881-202ENSMUST00000212489 4237 ntAPPRIS P1 TSL 3 BASIC2.96□□□□□ -1.94
Vps28Q9D1C8 Gm43379-201ENSMUST00000196253 7726 ntBASIC2.96□□□□□ -1.94
Vps28Q9D1C8 Cyp3a41a-201ENSMUST00000094111 2060 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
Vps28Q9D1C8 Olfr1052-203ENSMUST00000217166 1694 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
Vps28Q9D1C8 Gm14897-201ENSMUST00000118213 207 ntBASIC2.95□□□□□ -1.94
Vps28Q9D1C8 Gm13793-201ENSMUST00000124214 438 ntTSL 2 BASIC2.95□□□□□ -1.94
Vps28Q9D1C8 Gm17072-201ENSMUST00000166673 658 ntBASIC2.95□□□□□ -1.94
Vps28Q9D1C8 Gm21893-201ENSMUST00000179119 397 ntBASIC2.95□□□□□ -1.94
Vps28Q9D1C8 Mir6993-201ENSMUST00000184912 65 ntBASIC2.95□□□□□ -1.94
Vps28Q9D1C8 Gm1833-201ENSMUST00000191608 682 ntBASIC2.95□□□□□ -1.94
Vps28Q9D1C8 4930431P19Rik-201ENSMUST00000207570 451 ntBASIC2.95□□□□□ -1.94
Vps28Q9D1C8 AC122225.1-201ENSMUST00000215641 369 ntBASIC2.95□□□□□ -1.94
Vps28Q9D1C8 Gm18696-201ENSMUST00000220103 274 ntBASIC2.95□□□□□ -1.94
Vps28Q9D1C8 AC123062.1-201ENSMUST00000221287 481 ntBASIC2.95□□□□□ -1.94
Vps28Q9D1C8 AC166830.1-201ENSMUST00000224201 533 ntBASIC2.95□□□□□ -1.94
Vps28Q9D1C8 CT010480.5-201ENSMUST00000225026 217 ntBASIC2.95□□□□□ -1.94
Vps28Q9D1C8 AC129202.2-201ENSMUST00000225123 177 ntBASIC2.95□□□□□ -1.94
Vps28Q9D1C8 CT030662.1-201ENSMUST00000227380 232 ntBASIC2.95□□□□□ -1.94
Vps28Q9D1C8 Gm22249-201ENSMUST00000082485 136 ntBASIC2.95□□□□□ -1.94
Vps28Q9D1C8 Gm23247-201ENSMUST00000083373 107 ntBASIC2.95□□□□□ -1.94
Vps28Q9D1C8 Vmn1r46-206ENSMUST00000228401 10955 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
Vps28Q9D1C8 Cdk13-205ENSMUST00000222800 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC2.94□□□□□ -1.94
Vps28Q9D1C8 Olfr810-203ENSMUST00000214878 4709 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
Vps28Q9D1C8 Vmn2r74-201ENSMUST00000166355 2562 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
Vps28Q9D1C8 Btf3l4-201ENSMUST00000102739 723 ntAPPRIS P1 TSL 3 BASIC2.94□□□□□ -1.94
Vps28Q9D1C8 Gm22718-201ENSMUST00000122701 315 ntBASIC2.94□□□□□ -1.94
Vps28Q9D1C8 Cdrt4os2-201ENSMUST00000128675 494 ntTSL 2 BASIC2.94□□□□□ -1.94
Vps28Q9D1C8 Serf1-202ENSMUST00000129014 543 ntAPPRIS P1 TSL 3 BASIC2.94□□□□□ -1.94
Vps28Q9D1C8 Gm25373-201ENSMUST00000158156 115 ntBASIC2.94□□□□□ -1.94
Vps28Q9D1C8 Gm26215-201ENSMUST00000158584 139 ntBASIC2.94□□□□□ -1.94
Vps28Q9D1C8 Gm26335-201ENSMUST00000178449 107 ntBASIC2.94□□□□□ -1.94
Vps28Q9D1C8 Gm5224-201ENSMUST00000183060 350 ntBASIC2.94□□□□□ -1.94
Vps28Q9D1C8 Gm28647-201ENSMUST00000188416 197 ntBASIC2.94□□□□□ -1.94
Vps28Q9D1C8 Gm9236-201ENSMUST00000196892 587 ntBASIC2.94□□□□□ -1.94
Vps28Q9D1C8 Gm42925-201ENSMUST00000197359 285 ntBASIC2.94□□□□□ -1.94
Vps28Q9D1C8 Igkv15-97-201ENSMUST00000197637 339 ntBASIC2.94□□□□□ -1.94
Vps28Q9D1C8 Igkv1-108-201ENSMUST00000198926 298 ntBASIC2.94□□□□□ -1.94
Vps28Q9D1C8 Gm30484-201ENSMUST00000200327 449 ntTSL 5 BASIC2.94□□□□□ -1.94
Vps28Q9D1C8 Gm44425-201ENSMUST00000203739 429 ntBASIC2.94□□□□□ -1.94
Vps28Q9D1C8 Olfr1543-ps1-201ENSMUST00000217448 908 ntBASIC2.94□□□□□ -1.94
Vps28Q9D1C8 Olfr746-202ENSMUST00000218546 987 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
Vps28Q9D1C8 AC167229.1-201ENSMUST00000220057 469 ntBASIC2.94□□□□□ -1.94
Vps28Q9D1C8 Gm31025-201ENSMUST00000222553 482 ntTSL 5 BASIC2.94□□□□□ -1.94
Vps28Q9D1C8 AC124537.1-201ENSMUST00000222890 159 ntBASIC2.94□□□□□ -1.94
Vps28Q9D1C8 AC160984.2-201ENSMUST00000224927 791 ntBASIC2.94□□□□□ -1.94
Vps28Q9D1C8 Sval3-201ENSMUST00000080742 550 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
Vps28Q9D1C8 Mup1-201ENSMUST00000084548 776 ntAPPRIS ALT2 TSL 3 BASIC2.94□□□□□ -1.94
Vps28Q9D1C8 Olfr575-201ENSMUST00000084812 957 ntBASIC2.94□□□□□ -1.94
Vps28Q9D1C8 Olfr1097-201ENSMUST00000111576 4705 ntAPPRIS P1 TSL 3 BASIC2.94□□□□□ -1.94
Vps28Q9D1C8 AC163660.3-201ENSMUST00000224253 1563 ntBASIC2.94□□□□□ -1.94
Vps28Q9D1C8 Vmn1r185-211ENSMUST00000228467 6915 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
Vps28Q9D1C8 Olfr609-202ENSMUST00000216075 3429 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
Vps28Q9D1C8 Olfr65-203ENSMUST00000214300 2855 ntAPPRIS ALT1 TSL 5 BASIC2.94□□□□□ -1.94
Vps28Q9D1C8 C630028M04Rik-201ENSMUST00000141452 3387 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
Vps28Q9D1C8 Olfr898-203ENSMUST00000217063 4169 ntAPPRIS ALT2 TSL 5 BASIC2.93□□□□□ -1.94
Vps28Q9D1C8 Olfr1111-203ENSMUST00000216378 1636 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
Vps28Q9D1C8 Gm37236-201ENSMUST00000193670 3249 ntBASIC2.93□□□□□ -1.94
Vps28Q9D1C8 Muc16-204ENSMUST00000208663 25437 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
Vps28Q9D1C8 Gm25168-201ENSMUST00000104189 132 ntBASIC2.93□□□□□ -1.94
Vps28Q9D1C8 Gm10972-201ENSMUST00000107276 81 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
Vps28Q9D1C8 Gm8260-201ENSMUST00000119230 353 ntBASIC2.93□□□□□ -1.94
Vps28Q9D1C8 Gm12071-201ENSMUST00000121968 469 ntBASIC2.93□□□□□ -1.94
Vps28Q9D1C8 Gm23325-201ENSMUST00000157422 129 ntBASIC2.93□□□□□ -1.94
Vps28Q9D1C8 Gm23391-201ENSMUST00000157579 104 ntBASIC2.93□□□□□ -1.94
Vps28Q9D1C8 Gm16311-201ENSMUST00000161939 702 ntTSL 3 BASIC2.93□□□□□ -1.94
Retrieved 100 of 76,532 protein–RNA pairs in 97.2 ms