Protein–RNA interactions for Protein: Q9CR29

Ccdc43, Coiled-coil domain-containing protein 43, mousemouse

Known RBP Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc43Q9CR29 Gm22622-201ENSMUST00000082870 129 ntBASIC2.75□□□□□ -1.97
Ccdc43Q9CR29 Gm22443-201ENSMUST00000082890 107 ntBASIC2.75□□□□□ -1.97
Ccdc43Q9CR29 Olfr575-201ENSMUST00000084812 957 ntBASIC2.75□□□□□ -1.97
Ccdc43Q9CR29 Olfr895-201ENSMUST00000093864 951 ntBASIC2.75□□□□□ -1.97
Ccdc43Q9CR29 Gm43540-201ENSMUST00000196320 3848 ntBASIC2.75□□□□□ -1.97
Ccdc43Q9CR29 Gm3055-202ENSMUST00000218939 4067 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
Ccdc43Q9CR29 Zfp781-202ENSMUST00000219144 4067 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
Ccdc43Q9CR29 Tcp11x2-201ENSMUST00000078605 1776 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
Ccdc43Q9CR29 Gm14558-201ENSMUST00000117458 381 ntBASIC2.74□□□□□ -1.97
Ccdc43Q9CR29 Gm15183-201ENSMUST00000118933 348 ntBASIC2.74□□□□□ -1.97
Ccdc43Q9CR29 Gm14852-201ENSMUST00000120065 647 ntBASIC2.74□□□□□ -1.97
Ccdc43Q9CR29 Ighv1-78-201ENSMUST00000163670 294 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
Ccdc43Q9CR29 BC028528-205ENSMUST00000171519 447 ntAPPRIS P3 TSL 1 (best) BASIC2.74□□□□□ -1.97
Ccdc43Q9CR29 Mir7013-201ENSMUST00000183540 72 ntBASIC2.74□□□□□ -1.97
Ccdc43Q9CR29 Gm38127-201ENSMUST00000191978 468 ntTSL 5 BASIC2.74□□□□□ -1.97
Ccdc43Q9CR29 Gm37709-201ENSMUST00000195074 600 ntBASIC2.74□□□□□ -1.97
Ccdc43Q9CR29 1700108N06Rik-201ENSMUST00000196572 681 ntTSL 5 BASIC2.74□□□□□ -1.97
Ccdc43Q9CR29 Gm42164-201ENSMUST00000198881 379 ntBASIC2.74□□□□□ -1.97
Ccdc43Q9CR29 Gm45658-201ENSMUST00000209197 580 ntBASIC2.74□□□□□ -1.97
Ccdc43Q9CR29 AC153957.1-201ENSMUST00000215235 229 ntBASIC2.74□□□□□ -1.97
Ccdc43Q9CR29 Gm7065-201ENSMUST00000222150 474 ntBASIC2.74□□□□□ -1.97
Ccdc43Q9CR29 CT010506.2-201ENSMUST00000225618 183 ntBASIC2.74□□□□□ -1.97
Ccdc43Q9CR29 Tas2r107-201ENSMUST00000065781 1032 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
Ccdc43Q9CR29 Stfa2l1-201ENSMUST00000079184 414 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
Ccdc43Q9CR29 n-R5s176-201ENSMUST00000082683 109 ntBASIC2.74□□□□□ -1.97
Ccdc43Q9CR29 Snord104-201ENSMUST00000083192 70 ntBASIC2.74□□□□□ -1.97
Ccdc43Q9CR29 Olfr1025-ps1-202ENSMUST00000213474 3578 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
Ccdc43Q9CR29 Gm22151-201ENSMUST00000116963 58 ntBASIC2.73□□□□□ -1.97
Ccdc43Q9CR29 Gm13331-201ENSMUST00000117500 448 ntBASIC2.73□□□□□ -1.97
Ccdc43Q9CR29 Gm6574-201ENSMUST00000120037 362 ntBASIC2.73□□□□□ -1.97
Ccdc43Q9CR29 Gm14821-201ENSMUST00000121975 435 ntBASIC2.73□□□□□ -1.97
Ccdc43Q9CR29 n-R5s80-201ENSMUST00000122596 111 ntBASIC2.73□□□□□ -1.97
Ccdc43Q9CR29 Gm16355-201ENSMUST00000128606 231 ntBASIC2.73□□□□□ -1.97
Ccdc43Q9CR29 Gm11712-201ENSMUST00000129139 367 ntTSL 5 BASIC2.73□□□□□ -1.97
Ccdc43Q9CR29 Gm24962-201ENSMUST00000157917 109 ntBASIC2.73□□□□□ -1.97
Ccdc43Q9CR29 Scgb2b23-ps-202ENSMUST00000167012 516 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
Ccdc43Q9CR29 Mir5101-201ENSMUST00000175181 83 ntBASIC2.73□□□□□ -1.97
Ccdc43Q9CR29 Gm6660-201ENSMUST00000179149 468 ntBASIC2.73□□□□□ -1.97
Ccdc43Q9CR29 Mir6353-201ENSMUST00000183596 113 ntBASIC2.73□□□□□ -1.97
Ccdc43Q9CR29 Gm27753-201ENSMUST00000184742 203 ntBASIC2.73□□□□□ -1.97
Ccdc43Q9CR29 Obox4-ps2-201ENSMUST00000185088 442 ntBASIC2.73□□□□□ -1.97
Ccdc43Q9CR29 Sly-201ENSMUST00000189109 797 ntAPPRIS ALT2 TSL 1 (best) BASIC2.73□□□□□ -1.97
Ccdc43Q9CR29 1700019A02Rik-202ENSMUST00000190748 726 ntAPPRIS ALT2 TSL 3 BASIC2.73□□□□□ -1.97
Ccdc43Q9CR29 Gm42716-203ENSMUST00000197140 259 ntTSL 3 BASIC2.73□□□□□ -1.97
Ccdc43Q9CR29 Gm43626-201ENSMUST00000198575 162 ntBASIC2.73□□□□□ -1.97
Ccdc43Q9CR29 4930459L07Rik-201ENSMUST00000199751 420 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
Ccdc43Q9CR29 AC153968.2-201ENSMUST00000215579 1140 ntBASIC2.73□□□□□ -1.97
Ccdc43Q9CR29 Gm9762-201ENSMUST00000036976 444 ntBASIC2.73□□□□□ -1.97
Ccdc43Q9CR29 Gm26327-201ENSMUST00000093724 111 ntBASIC2.73□□□□□ -1.97
Ccdc43Q9CR29 Gm10337-201ENSMUST00000096145 165 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
Ccdc43Q9CR29 Olfr1206-202ENSMUST00000216950 3303 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
Ccdc43Q9CR29 Gm1980-201ENSMUST00000123131 2306 ntBASIC2.73□□□□□ -1.97
Ccdc43Q9CR29 Olfr934-202ENSMUST00000214324 2462 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
Ccdc43Q9CR29 Zfp638-212ENSMUST00000203891 3968 ntAPPRIS ALT2 TSL 5 BASIC2.72□□□□□ -1.97
Ccdc43Q9CR29 Mir344c-201ENSMUST00000103919 92 ntBASIC2.72□□□□□ -1.97
Ccdc43Q9CR29 Gm24670-201ENSMUST00000104154 132 ntBASIC2.72□□□□□ -1.97
Ccdc43Q9CR29 Gm12584-201ENSMUST00000117109 1105 ntBASIC2.72□□□□□ -1.97
Ccdc43Q9CR29 Gm12071-201ENSMUST00000121968 469 ntBASIC2.72□□□□□ -1.97
Ccdc43Q9CR29 Gm14978-201ENSMUST00000129000 304 ntTSL 3 BASIC2.72□□□□□ -1.97
Ccdc43Q9CR29 Gm11842-201ENSMUST00000130117 556 ntTSL 5 BASIC2.72□□□□□ -1.97
Ccdc43Q9CR29 Gm23980-201ENSMUST00000157135 158 ntBASIC2.72□□□□□ -1.97
Ccdc43Q9CR29 Gm23317-201ENSMUST00000157999 129 ntBASIC2.72□□□□□ -1.97
Ccdc43Q9CR29 Gm24546-201ENSMUST00000158652 102 ntBASIC2.72□□□□□ -1.97
Ccdc43Q9CR29 Gm18416-201ENSMUST00000175635 1003 ntBASIC2.72□□□□□ -1.97
Ccdc43Q9CR29 Gm22633-201ENSMUST00000179834 107 ntBASIC2.72□□□□□ -1.97
Ccdc43Q9CR29 4932441J04Rik-201ENSMUST00000180708 729 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
Ccdc43Q9CR29 Mrgprb1-203ENSMUST00000188918 435 ntTSL 3 BASIC2.72□□□□□ -1.97
Ccdc43Q9CR29 Gm38167-201ENSMUST00000195704 1178 ntBASIC2.72□□□□□ -1.97
Ccdc43Q9CR29 Gm44012-201ENSMUST00000204154 424 ntTSL 3 BASIC2.72□□□□□ -1.97
Ccdc43Q9CR29 D730003K21Rik-201ENSMUST00000215052 589 ntTSL 2 BASIC2.72□□□□□ -1.97
Ccdc43Q9CR29 AC166830.1-201ENSMUST00000224201 533 ntBASIC2.72□□□□□ -1.97
Ccdc43Q9CR29 Cox7b2-201ENSMUST00000050129 542 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
Ccdc43Q9CR29 AC153967.1-201ENSMUST00000219333 3190 ntBASIC2.72□□□□□ -1.97
Ccdc43Q9CR29 Ifi203-201ENSMUST00000042228 3754 ntAPPRIS ALT2 TSL 1 (best) BASIC2.72□□□□□ -1.97
Ccdc43Q9CR29 Mir466k-201ENSMUST00000116774 122 ntBASIC2.71□□□□□ -1.98
Ccdc43Q9CR29 Gm15807-201ENSMUST00000119880 1128 ntBASIC2.71□□□□□ -1.98
Ccdc43Q9CR29 Gm23885-201ENSMUST00000122682 294 ntBASIC2.71□□□□□ -1.98
Ccdc43Q9CR29 Gm24691-201ENSMUST00000157762 140 ntBASIC2.71□□□□□ -1.98
Ccdc43Q9CR29 Gm22733-201ENSMUST00000158094 91 ntBASIC2.71□□□□□ -1.98
Ccdc43Q9CR29 Gm16004-201ENSMUST00000161981 311 ntTSL 5 BASIC2.71□□□□□ -1.98
Ccdc43Q9CR29 Vmn1r-ps149-201ENSMUST00000176997 183 ntBASIC2.71□□□□□ -1.98
Ccdc43Q9CR29 Mir6370-201ENSMUST00000183510 120 ntBASIC2.71□□□□□ -1.98
Ccdc43Q9CR29 Gm28595-201ENSMUST00000186223 437 ntTSL 5 BASIC2.71□□□□□ -1.98
Ccdc43Q9CR29 Gm6445-201ENSMUST00000189515 1112 ntBASIC2.71□□□□□ -1.98
Ccdc43Q9CR29 Gm19193-201ENSMUST00000190263 590 ntBASIC2.71□□□□□ -1.98
Ccdc43Q9CR29 Trav14-1-201ENSMUST00000198297 399 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
Ccdc43Q9CR29 Rpl18a-ps3-201ENSMUST00000198938 171 ntBASIC2.71□□□□□ -1.98
Ccdc43Q9CR29 Gm38405-203ENSMUST00000208548 400 ntTSL 5 BASIC2.71□□□□□ -1.98
Ccdc43Q9CR29 Gm45240-201ENSMUST00000211437 674 ntBASIC2.71□□□□□ -1.98
Ccdc43Q9CR29 AC102291.2-201ENSMUST00000228083 367 ntBASIC2.71□□□□□ -1.98
Ccdc43Q9CR29 Olfr1370-201ENSMUST00000058168 951 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
Ccdc43Q9CR29 Gm5471-201ENSMUST00000072732 337 ntBASIC2.71□□□□□ -1.98
Ccdc43Q9CR29 Olfr175-ps1-201ENSMUST00000079955 1169 ntAPPRIS P1 TSL 2 BASIC2.71□□□□□ -1.98
Ccdc43Q9CR29 Gm43032-201ENSMUST00000197967 3123 ntBASIC2.71□□□□□ -1.98
Ccdc43Q9CR29 Zfy2-201ENSMUST00000115891 2816 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
Ccdc43Q9CR29 AC154386.1-201ENSMUST00000222753 2871 ntBASIC2.71□□□□□ -1.98
Ccdc43Q9CR29 Gm37761-201ENSMUST00000194989 2098 ntBASIC2.7□□□□□ -1.98
Ccdc43Q9CR29 Gm36989-201ENSMUST00000193225 2160 ntBASIC2.7□□□□□ -1.98
Ccdc43Q9CR29 2610300M13Rik-202ENSMUST00000203716 1787 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
Ccdc43Q9CR29 Gm13368-201ENSMUST00000122443 430 ntBASIC2.7□□□□□ -1.98
Retrieved 100 of 76,532 protein–RNA pairs in 96.1 ms