Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Gm26173-201ENSMUST00000158416 136 ntBASIC1.68□□□□□ -2.14
RTRAFQ9CQE8 Gm24878-201ENSMUST00000158782 104 ntBASIC1.68□□□□□ -2.14
RTRAFQ9CQE8 Gm22290-201ENSMUST00000177655 107 ntBASIC1.68□□□□□ -2.14
RTRAFQ9CQE8 Gm21095-201ENSMUST00000177775 498 ntTSL 5 BASIC1.68□□□□□ -2.14
RTRAFQ9CQE8 Gm21858-201ENSMUST00000177834 498 ntTSL 5 BASIC1.68□□□□□ -2.14
RTRAFQ9CQE8 Gm22583-201ENSMUST00000178031 107 ntBASIC1.68□□□□□ -2.14
RTRAFQ9CQE8 Gm20916-201ENSMUST00000178063 498 ntTSL 5 BASIC1.68□□□□□ -2.14
RTRAFQ9CQE8 Gm25361-201ENSMUST00000179358 76 ntBASIC1.68□□□□□ -2.14
RTRAFQ9CQE8 Gm21760-201ENSMUST00000179811 498 ntTSL 5 BASIC1.68□□□□□ -2.14
RTRAFQ9CQE8 Gm21477-201ENSMUST00000179970 498 ntTSL 5 BASIC1.68□□□□□ -2.14
RTRAFQ9CQE8 Gm21117-201ENSMUST00000180133 498 ntTSL 5 BASIC1.68□□□□□ -2.14
RTRAFQ9CQE8 Gm20855-201ENSMUST00000180170 498 ntTSL 5 BASIC1.68□□□□□ -2.14
RTRAFQ9CQE8 Gm20931-201ENSMUST00000180249 498 ntTSL 5 BASIC1.68□□□□□ -2.14
RTRAFQ9CQE8 Gm20896-201ENSMUST00000180332 498 ntTSL 5 BASIC1.68□□□□□ -2.14
RTRAFQ9CQE8 Gm26897-201ENSMUST00000180627 93 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
RTRAFQ9CQE8 Gm27505-201ENSMUST00000185071 110 ntBASIC1.68□□□□□ -2.14
RTRAFQ9CQE8 Rpl23a-ps10-201ENSMUST00000185511 462 ntBASIC1.68□□□□□ -2.14
RTRAFQ9CQE8 Gm29216-201ENSMUST00000187117 492 ntBASIC1.68□□□□□ -2.14
RTRAFQ9CQE8 Gm28356-202ENSMUST00000187566 858 ntBASIC1.68□□□□□ -2.14
RTRAFQ9CQE8 Gm28299-201ENSMUST00000189908 339 ntBASIC1.68□□□□□ -2.14
RTRAFQ9CQE8 Gm20885-201ENSMUST00000190192 654 ntBASIC1.68□□□□□ -2.14
RTRAFQ9CQE8 Gm36866-201ENSMUST00000193343 657 ntBASIC1.68□□□□□ -2.14
RTRAFQ9CQE8 Gm36047-201ENSMUST00000193659 657 ntBASIC1.68□□□□□ -2.14
RTRAFQ9CQE8 Gm38238-201ENSMUST00000194334 346 ntBASIC1.68□□□□□ -2.14
RTRAFQ9CQE8 Gm20857-201ENSMUST00000194766 657 ntBASIC1.68□□□□□ -2.14
RTRAFQ9CQE8 Gm20858-201ENSMUST00000195459 657 ntBASIC1.68□□□□□ -2.14
RTRAFQ9CQE8 Gm29848-201ENSMUST00000203107 295 ntBASIC1.68□□□□□ -2.14
RTRAFQ9CQE8 Gm44526-201ENSMUST00000204664 121 ntBASIC1.68□□□□□ -2.14
RTRAFQ9CQE8 Gm44135-201ENSMUST00000205221 368 ntBASIC1.68□□□□□ -2.14
RTRAFQ9CQE8 Gm38405-203ENSMUST00000208548 400 ntTSL 5 BASIC1.68□□□□□ -2.14
RTRAFQ9CQE8 Gm18703-201ENSMUST00000215318 333 ntBASIC1.68□□□□□ -2.14
RTRAFQ9CQE8 AC122225.1-201ENSMUST00000215641 369 ntBASIC1.68□□□□□ -2.14
RTRAFQ9CQE8 AC111046.1-201ENSMUST00000217715 412 ntBASIC1.68□□□□□ -2.14
RTRAFQ9CQE8 Gm9318-201ENSMUST00000222444 438 ntBASIC1.68□□□□□ -2.14
RTRAFQ9CQE8 Olfr138-201ENSMUST00000071871 939 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
RTRAFQ9CQE8 Gm24165-201ENSMUST00000082718 128 ntBASIC1.68□□□□□ -2.14
RTRAFQ9CQE8 Gm22806-201ENSMUST00000082738 136 ntBASIC1.68□□□□□ -2.14
RTRAFQ9CQE8 Gm22810-201ENSMUST00000082741 158 ntBASIC1.68□□□□□ -2.14
RTRAFQ9CQE8 Gm22508-201ENSMUST00000082772 110 ntBASIC1.68□□□□□ -2.14
RTRAFQ9CQE8 Mir463-201ENSMUST00000093570 75 ntBASIC1.68□□□□□ -2.14
RTRAFQ9CQE8 Gm26327-201ENSMUST00000093724 111 ntBASIC1.68□□□□□ -2.14
RTRAFQ9CQE8 AC122887.2-201ENSMUST00000219465 1603 ntBASIC1.68□□□□□ -2.14
RTRAFQ9CQE8 Ppp1r42-201ENSMUST00000027049 1425 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
RTRAFQ9CQE8 Olfr165-202ENSMUST00000206110 1862 ntAPPRIS ALT1 TSL 3 BASIC1.67□□□□□ -2.14
RTRAFQ9CQE8 Gm42536-201ENSMUST00000197562 1613 ntBASIC1.67□□□□□ -2.14
RTRAFQ9CQE8 Ighv9-3-201ENSMUST00000103473 351 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
RTRAFQ9CQE8 Mir190b-201ENSMUST00000104803 80 ntBASIC1.67□□□□□ -2.14
RTRAFQ9CQE8 Gm11065-201ENSMUST00000111462 228 ntBASIC1.67□□□□□ -2.14
RTRAFQ9CQE8 Gm15120-201ENSMUST00000120602 301 ntBASIC1.67□□□□□ -2.14
RTRAFQ9CQE8 Gm16428-201ENSMUST00000121193 723 ntBASIC1.67□□□□□ -2.14
RTRAFQ9CQE8 Gm24517-201ENSMUST00000122560 107 ntBASIC1.67□□□□□ -2.14
RTRAFQ9CQE8 Gm15718-201ENSMUST00000131085 311 ntTSL 3 BASIC1.67□□□□□ -2.14
RTRAFQ9CQE8 Gm23956-201ENSMUST00000157211 119 ntBASIC1.67□□□□□ -2.14
RTRAFQ9CQE8 Gm22597-201ENSMUST00000157602 80 ntBASIC1.67□□□□□ -2.14
RTRAFQ9CQE8 Gm22534-201ENSMUST00000158173 104 ntBASIC1.67□□□□□ -2.14
RTRAFQ9CQE8 Gm25490-201ENSMUST00000158734 130 ntBASIC1.67□□□□□ -2.14
RTRAFQ9CQE8 Defa27-201ENSMUST00000167683 282 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
RTRAFQ9CQE8 Mir3965-201ENSMUST00000175570 69 ntBASIC1.67□□□□□ -2.14
RTRAFQ9CQE8 Mir6379-201ENSMUST00000183392 115 ntBASIC1.67□□□□□ -2.14
RTRAFQ9CQE8 Gm28000-201ENSMUST00000184380 85 ntBASIC1.67□□□□□ -2.14
RTRAFQ9CQE8 Gm28399-201ENSMUST00000186221 318 ntBASIC1.67□□□□□ -2.14
RTRAFQ9CQE8 Gm28572-201ENSMUST00000187444 318 ntBASIC1.67□□□□□ -2.14
RTRAFQ9CQE8 1700044K03Rik-201ENSMUST00000190201 377 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
RTRAFQ9CQE8 Gm32250-201ENSMUST00000191885 322 ntTSL 3 BASIC1.67□□□□□ -2.14
RTRAFQ9CQE8 Gm2719-201ENSMUST00000191929 444 ntBASIC1.67□□□□□ -2.14
RTRAFQ9CQE8 Gm18964-201ENSMUST00000193013 563 ntBASIC1.67□□□□□ -2.14
RTRAFQ9CQE8 Gm37000-201ENSMUST00000193058 428 ntBASIC1.67□□□□□ -2.14
RTRAFQ9CQE8 Gm37771-201ENSMUST00000193121 265 ntBASIC1.67□□□□□ -2.14
RTRAFQ9CQE8 Gm37910-201ENSMUST00000194770 217 ntTSL 5 BASIC1.67□□□□□ -2.14
RTRAFQ9CQE8 Gm43007-201ENSMUST00000197618 291 ntBASIC1.67□□□□□ -2.14
RTRAFQ9CQE8 Gm43101-202ENSMUST00000201733 488 ntTSL 2 BASIC1.67□□□□□ -2.14
RTRAFQ9CQE8 Gm45590-201ENSMUST00000209715 262 ntBASIC1.67□□□□□ -2.14
RTRAFQ9CQE8 Gm7692-201ENSMUST00000213534 409 ntBASIC1.67□□□□□ -2.14
RTRAFQ9CQE8 AC163289.1-201ENSMUST00000215919 262 ntBASIC1.67□□□□□ -2.14
RTRAFQ9CQE8 Rpl26-ps6-201ENSMUST00000216693 434 ntBASIC1.67□□□□□ -2.14
RTRAFQ9CQE8 4930567K20Rik-203ENSMUST00000220108 646 ntTSL 5 BASIC1.67□□□□□ -2.14
RTRAFQ9CQE8 AC138667.2-201ENSMUST00000224880 598 ntBASIC1.67□□□□□ -2.14
RTRAFQ9CQE8 Gm25257-201ENSMUST00000083907 110 ntBASIC1.67□□□□□ -2.14
RTRAFQ9CQE8 AC125374.3-201ENSMUST00000214983 2810 ntBASIC1.67□□□□□ -2.14
RTRAFQ9CQE8 Zfp966-201ENSMUST00000108949 2939 ntAPPRIS P1 TSL 3 BASIC1.67□□□□□ -2.14
RTRAFQ9CQE8 Gm45393-201ENSMUST00000211634 2631 ntBASIC1.66□□□□□ -2.14
RTRAFQ9CQE8 Gm24984-201ENSMUST00000104454 133 ntBASIC1.66□□□□□ -2.14
RTRAFQ9CQE8 Gm15215-201ENSMUST00000117773 489 ntBASIC1.66□□□□□ -2.14
RTRAFQ9CQE8 Gm15659-201ENSMUST00000118881 341 ntBASIC1.66□□□□□ -2.14
RTRAFQ9CQE8 Gm14765-201ENSMUST00000121954 326 ntBASIC1.66□□□□□ -2.14
RTRAFQ9CQE8 Gm14821-201ENSMUST00000121975 435 ntBASIC1.66□□□□□ -2.14
RTRAFQ9CQE8 Gm15167-201ENSMUST00000121997 187 ntBASIC1.66□□□□□ -2.14
RTRAFQ9CQE8 n-R5s164-201ENSMUST00000122664 112 ntBASIC1.66□□□□□ -2.14
RTRAFQ9CQE8 Gm23668-201ENSMUST00000157465 111 ntBASIC1.66□□□□□ -2.14
RTRAFQ9CQE8 Gm24784-201ENSMUST00000157640 62 ntBASIC1.66□□□□□ -2.14
RTRAFQ9CQE8 Vmn2r-ps111-201ENSMUST00000161565 241 ntTSL 2 BASIC1.66□□□□□ -2.14
RTRAFQ9CQE8 Ear10-202ENSMUST00000163652 471 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
RTRAFQ9CQE8 Gm17689-201ENSMUST00000170030 330 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
RTRAFQ9CQE8 Mir5101-201ENSMUST00000175181 83 ntBASIC1.66□□□□□ -2.14
RTRAFQ9CQE8 Gm18416-201ENSMUST00000175635 1003 ntBASIC1.66□□□□□ -2.14
RTRAFQ9CQE8 Gm24304-201ENSMUST00000177635 107 ntBASIC1.66□□□□□ -2.14
RTRAFQ9CQE8 Gm24019-201ENSMUST00000178620 107 ntBASIC1.66□□□□□ -2.14
RTRAFQ9CQE8 Gm26243-201ENSMUST00000179260 107 ntBASIC1.66□□□□□ -2.14
RTRAFQ9CQE8 C920009B18Rik-204ENSMUST00000181733 123 ntBASIC1.66□□□□□ -2.14
RTRAFQ9CQE8 Gm28474-201ENSMUST00000188501 315 ntBASIC1.66□□□□□ -2.14
Retrieved 100 of 76,532 protein–RNA pairs in 80.3 ms