Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 Gm12765-201ENSMUST00000117273 615 ntBASIC2□□□□□ -2.09
Use1Q9CQ56 Zcchc9-ps-201ENSMUST00000117884 786 ntBASIC2□□□□□ -2.09
Use1Q9CQ56 Gm12656-201ENSMUST00000118149 577 ntBASIC2□□□□□ -2.09
Use1Q9CQ56 Rps13-ps8-201ENSMUST00000118906 401 ntBASIC2□□□□□ -2.09
Use1Q9CQ56 Gm15167-201ENSMUST00000121997 187 ntBASIC2□□□□□ -2.09
Use1Q9CQ56 Cep41-210ENSMUST00000169422 438 ntTSL 3 BASIC2□□□□□ -2.09
Use1Q9CQ56 Gm24816-201ENSMUST00000175311 151 ntBASIC2□□□□□ -2.09
Use1Q9CQ56 Mir6370-201ENSMUST00000183510 120 ntBASIC2□□□□□ -2.09
Use1Q9CQ56 Gm42604-201ENSMUST00000200077 801 ntTSL 3 BASIC2□□□□□ -2.09
Use1Q9CQ56 Gm43732-201ENSMUST00000200260 511 ntTSL 1 (best) BASIC2□□□□□ -2.09
Use1Q9CQ56 Gm17911-201ENSMUST00000210806 877 ntBASIC2□□□□□ -2.09
Use1Q9CQ56 Gm45355-201ENSMUST00000211342 296 ntTSL 3 BASIC2□□□□□ -2.09
Use1Q9CQ56 Gm6796-201ENSMUST00000211919 243 ntBASIC2□□□□□ -2.09
Use1Q9CQ56 AC158598.1-201ENSMUST00000214349 3847 ntBASIC2□□□□□ -2.09
Use1Q9CQ56 AC134468.1-201ENSMUST00000220869 299 ntTSL 5 BASIC2□□□□□ -2.09
Use1Q9CQ56 AC113031.5-201ENSMUST00000227116 606 ntBASIC2□□□□□ -2.09
Use1Q9CQ56 Tslp-201ENSMUST00000025237 1133 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
Use1Q9CQ56 AC122828.3-201ENSMUST00000223019 3915 ntBASIC2□□□□□ -2.09
Use1Q9CQ56 Atp5k-ps2-201ENSMUST00000120437 210 ntBASIC1.99□□□□□ -2.09
Use1Q9CQ56 Zfp950-205ENSMUST00000148569 192 ntTSL 5 BASIC1.99□□□□□ -2.09
Use1Q9CQ56 Gm24601-201ENSMUST00000157970 143 ntBASIC1.99□□□□□ -2.09
Use1Q9CQ56 Gm3221-201ENSMUST00000164869 440 ntBASIC1.99□□□□□ -2.09
Use1Q9CQ56 Gm28838-201ENSMUST00000186338 315 ntBASIC1.99□□□□□ -2.09
Use1Q9CQ56 Gm29635-201ENSMUST00000187221 315 ntBASIC1.99□□□□□ -2.09
Use1Q9CQ56 Gm29026-201ENSMUST00000187787 315 ntBASIC1.99□□□□□ -2.09
Use1Q9CQ56 Gm28797-201ENSMUST00000188543 315 ntBASIC1.99□□□□□ -2.09
Use1Q9CQ56 Gm28855-201ENSMUST00000188680 315 ntBASIC1.99□□□□□ -2.09
Use1Q9CQ56 Gm28705-201ENSMUST00000189548 315 ntBASIC1.99□□□□□ -2.09
Use1Q9CQ56 Gm28939-201ENSMUST00000190351 315 ntBASIC1.99□□□□□ -2.09
Use1Q9CQ56 Gm28223-201ENSMUST00000190469 315 ntBASIC1.99□□□□□ -2.09
Use1Q9CQ56 Gm29092-201ENSMUST00000190768 315 ntBASIC1.99□□□□□ -2.09
Use1Q9CQ56 Ttn-225ENSMUST00000190813 300 ntTSL 5 BASIC1.99□□□□□ -2.09
Use1Q9CQ56 Gm37771-201ENSMUST00000193121 265 ntBASIC1.99□□□□□ -2.09
Use1Q9CQ56 Gm38238-201ENSMUST00000194334 346 ntBASIC1.99□□□□□ -2.09
Use1Q9CQ56 Mir703-201ENSMUST00000197105 109 ntBASIC1.99□□□□□ -2.09
Use1Q9CQ56 Igkv12-49-201ENSMUST00000197714 278 ntBASIC1.99□□□□□ -2.09
Use1Q9CQ56 Pdcd10-201ENSMUST00000029424 907 ntTSL 5 BASIC1.99□□□□□ -2.09
Use1Q9CQ56 Spinkl-201ENSMUST00000066328 593 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
Use1Q9CQ56 Olfr802-201ENSMUST00000074713 939 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
Use1Q9CQ56 mt-Nd2-201ENSMUST00000082396 1038 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
Use1Q9CQ56 Snora69-201ENSMUST00000083708 131 ntBASIC1.99□□□□□ -2.09
Use1Q9CQ56 Mir127-201ENSMUST00000093568 70 ntBASIC1.99□□□□□ -2.09
Use1Q9CQ56 Zfp735-201ENSMUST00000080407 3746 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
Use1Q9CQ56 Gm14405-201ENSMUST00000117808 2330 ntBASIC1.99□□□□□ -2.09
Use1Q9CQ56 AC167192.3-201ENSMUST00000224096 1567 ntBASIC1.98□□□□□ -2.09
Use1Q9CQ56 Gm8978-201ENSMUST00000124230 2224 ntTSL 5 BASIC1.98□□□□□ -2.09
Use1Q9CQ56 Olfr630-201ENSMUST00000106880 2198 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
Use1Q9CQ56 Gm23472-201ENSMUST00000101806 191 ntBASIC1.98□□□□□ -2.09
Use1Q9CQ56 Gm22494-201ENSMUST00000104495 128 ntBASIC1.98□□□□□ -2.09
Use1Q9CQ56 Gm12550-201ENSMUST00000118478 329 ntBASIC1.98□□□□□ -2.09
Use1Q9CQ56 Gm14428-201ENSMUST00000120408 822 ntBASIC1.98□□□□□ -2.09
Use1Q9CQ56 Gm24846-201ENSMUST00000158033 108 ntBASIC1.98□□□□□ -2.09
Use1Q9CQ56 Gm25365-201ENSMUST00000158852 121 ntBASIC1.98□□□□□ -2.09
Use1Q9CQ56 Gm18416-201ENSMUST00000175635 1003 ntBASIC1.98□□□□□ -2.09
Use1Q9CQ56 Gm24497-201ENSMUST00000177868 191 ntBASIC1.98□□□□□ -2.09
Use1Q9CQ56 Gm21775-201ENSMUST00000178669 540 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
Use1Q9CQ56 Gm6660-201ENSMUST00000179149 468 ntBASIC1.98□□□□□ -2.09
Use1Q9CQ56 Gm25156-201ENSMUST00000179809 79 ntBASIC1.98□□□□□ -2.09
Use1Q9CQ56 Gm25939-201ENSMUST00000179876 191 ntBASIC1.98□□□□□ -2.09
Use1Q9CQ56 Gm44609-201ENSMUST00000207157 460 ntBASIC1.98□□□□□ -2.09
Use1Q9CQ56 Gm18991-201ENSMUST00000209225 746 ntBASIC1.98□□□□□ -2.09
Use1Q9CQ56 AC156795.1-201ENSMUST00000214655 414 ntBASIC1.98□□□□□ -2.09
Use1Q9CQ56 Gm46124-201ENSMUST00000215223 808 ntTSL 5 BASIC1.98□□□□□ -2.09
Use1Q9CQ56 AC164567.2-201ENSMUST00000219363 445 ntBASIC1.98□□□□□ -2.09
Use1Q9CQ56 AC111044.1-201ENSMUST00000220206 555 ntTSL 5 BASIC1.98□□□□□ -2.09
Use1Q9CQ56 AC141642.1-201ENSMUST00000220598 229 ntBASIC1.98□□□□□ -2.09
Use1Q9CQ56 Gm7214-201ENSMUST00000222428 272 ntBASIC1.98□□□□□ -2.09
Use1Q9CQ56 AC173345.1-201ENSMUST00000222837 306 ntTSL 5 BASIC1.98□□□□□ -2.09
Use1Q9CQ56 AC164597.2-201ENSMUST00000226738 603 ntBASIC1.98□□□□□ -2.09
Use1Q9CQ56 AC122341.1-201ENSMUST00000227291 560 ntBASIC1.98□□□□□ -2.09
Use1Q9CQ56 Gm23444-201ENSMUST00000082922 191 ntBASIC1.98□□□□□ -2.09
Use1Q9CQ56 Gm23848-201ENSMUST00000083826 106 ntBASIC1.98□□□□□ -2.09
Use1Q9CQ56 Gm24817-201ENSMUST00000093672 105 ntBASIC1.98□□□□□ -2.09
Use1Q9CQ56 Gm23516-201ENSMUST00000093728 107 ntBASIC1.98□□□□□ -2.09
Use1Q9CQ56 Skint2-203ENSMUST00000106560 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC1.97□□□□□ -2.09
Use1Q9CQ56 Olfr385-202ENSMUST00000215689 1671 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
Use1Q9CQ56 Gm12598-201ENSMUST00000117333 830 ntBASIC1.97□□□□□ -2.09
Use1Q9CQ56 Gm12872-201ENSMUST00000121835 320 ntBASIC1.97□□□□□ -2.09
Use1Q9CQ56 Gm14848-201ENSMUST00000121850 467 ntBASIC1.97□□□□□ -2.09
Use1Q9CQ56 Gm24237-201ENSMUST00000157790 132 ntBASIC1.97□□□□□ -2.09
Use1Q9CQ56 Gm17072-201ENSMUST00000166673 658 ntBASIC1.97□□□□□ -2.09
Use1Q9CQ56 Trav6-3-202ENSMUST00000183604 305 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
Use1Q9CQ56 Mir6335-201ENSMUST00000184081 98 ntBASIC1.97□□□□□ -2.09
Use1Q9CQ56 Mir6916-201ENSMUST00000184514 63 ntBASIC1.97□□□□□ -2.09
Use1Q9CQ56 Mir7047-201ENSMUST00000184595 64 ntBASIC1.97□□□□□ -2.09
Use1Q9CQ56 Gm27991-201ENSMUST00000184804 137 ntBASIC1.97□□□□□ -2.09
Use1Q9CQ56 Trav6d-3-202ENSMUST00000184883 308 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
Use1Q9CQ56 Obox4-ps2-201ENSMUST00000185088 442 ntBASIC1.97□□□□□ -2.09
Use1Q9CQ56 1810022K09Rik-203ENSMUST00000185423 278 ntTSL 3 BASIC1.97□□□□□ -2.09
Use1Q9CQ56 Gm43865-201ENSMUST00000204721 127 ntBASIC1.97□□□□□ -2.09
Use1Q9CQ56 AC157352.1-201ENSMUST00000222762 303 ntTSL 5 BASIC1.97□□□□□ -2.09
Use1Q9CQ56 CT010480.5-201ENSMUST00000225026 217 ntBASIC1.97□□□□□ -2.09
Use1Q9CQ56 Gm22353-201ENSMUST00000083918 136 ntBASIC1.97□□□□□ -2.09
Use1Q9CQ56 Gm36944-201ENSMUST00000192257 2759 ntBASIC1.97□□□□□ -2.09
Use1Q9CQ56 Olfr1291-ps1-201ENSMUST00000121345 5403 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
Use1Q9CQ56 Gm26002-201ENSMUST00000101915 107 ntBASIC1.96□□□□□ -2.1
Use1Q9CQ56 Gm23175-201ENSMUST00000104371 132 ntBASIC1.96□□□□□ -2.1
Use1Q9CQ56 Gm24907-201ENSMUST00000116932 128 ntBASIC1.96□□□□□ -2.1
Use1Q9CQ56 Gm24857-201ENSMUST00000158061 310 ntBASIC1.96□□□□□ -2.1
Use1Q9CQ56 Gm24713-201ENSMUST00000178850 107 ntBASIC1.96□□□□□ -2.1
Retrieved 100 of 76,532 protein–RNA pairs in 80.5 ms