Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Gm27410-201ENSMUST00000183851 115 ntBASIC3.59□□□□□ -1.83
Pcdha9Q91Y11 Scgb2b29-ps-201ENSMUST00000187539 331 ntBASIC3.59□□□□□ -1.83
Pcdha9Q91Y11 Gm31415-201ENSMUST00000194963 344 ntTSL 5 BASIC3.59□□□□□ -1.83
Pcdha9Q91Y11 Gm18982-201ENSMUST00000198118 529 ntBASIC3.59□□□□□ -1.83
Pcdha9Q91Y11 Gm43405-201ENSMUST00000198642 337 ntBASIC3.59□□□□□ -1.83
Pcdha9Q91Y11 Gm42812-201ENSMUST00000199844 337 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Pcdha9Q91Y11 Gm25203-202ENSMUST00000200458 216 ntBASIC3.59□□□□□ -1.83
Pcdha9Q91Y11 Gm30146-201ENSMUST00000206564 605 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Pcdha9Q91Y11 Snora7a-201ENSMUST00000082629 140 ntBASIC3.59□□□□□ -1.83
Pcdha9Q91Y11 Gm25203-201ENSMUST00000082842 215 ntBASIC3.59□□□□□ -1.83
Pcdha9Q91Y11 Defb41-201ENSMUST00000088463 467 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Pcdha9Q91Y11 Postn-203ENSMUST00000107985 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
Pcdha9Q91Y11 Gm29674-202ENSMUST00000219664 4083 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Pcdha9Q91Y11 Olfr1253-202ENSMUST00000213484 4812 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Pcdha9Q91Y11 Vmn1r89-208ENSMUST00000228587 2061 ntAPPRIS P2 BASIC3.59□□□□□ -1.83
Pcdha9Q91Y11 Gm9747-201ENSMUST00000023262 2822 ntAPPRIS P1 BASIC3.59□□□□□ -1.84
Pcdha9Q91Y11 AC122887.2-201ENSMUST00000219465 1603 ntBASIC3.59□□□□□ -1.84
Pcdha9Q91Y11 Inpp4b-201ENSMUST00000042529 4120 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
Pcdha9Q91Y11 AC121844.2-201ENSMUST00000219067 2066 ntBASIC3.58□□□□□ -1.84
Pcdha9Q91Y11 Snord116l9-201ENSMUST00000101891 94 ntBASIC3.58□□□□□ -1.84
Pcdha9Q91Y11 Gm26504-201ENSMUST00000102033 94 ntBASIC3.58□□□□□ -1.84
Pcdha9Q91Y11 Gm12458-201ENSMUST00000119387 495 ntBASIC3.58□□□□□ -1.84
Pcdha9Q91Y11 Gm23956-201ENSMUST00000157211 119 ntBASIC3.58□□□□□ -1.84
Pcdha9Q91Y11 Gm22380-201ENSMUST00000157479 95 ntBASIC3.58□□□□□ -1.84
Pcdha9Q91Y11 Gm25572-201ENSMUST00000157527 172 ntBASIC3.58□□□□□ -1.84
Pcdha9Q91Y11 Gm17062-201ENSMUST00000166987 461 ntBASIC3.58□□□□□ -1.84
Pcdha9Q91Y11 4930518C09Rik-201ENSMUST00000172700 478 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Pcdha9Q91Y11 Gm26502-201ENSMUST00000177732 94 ntBASIC3.58□□□□□ -1.84
Pcdha9Q91Y11 Snord116l13-201ENSMUST00000177737 94 ntBASIC3.58□□□□□ -1.84
Pcdha9Q91Y11 Gm25350-201ENSMUST00000177849 94 ntBASIC3.58□□□□□ -1.84
Pcdha9Q91Y11 Snord116l15-201ENSMUST00000177940 94 ntBASIC3.58□□□□□ -1.84
Pcdha9Q91Y11 Gm23446-201ENSMUST00000177977 94 ntBASIC3.58□□□□□ -1.84
Pcdha9Q91Y11 Snord116l4-201ENSMUST00000177982 94 ntBASIC3.58□□□□□ -1.84
Pcdha9Q91Y11 Gm26201-201ENSMUST00000178047 94 ntBASIC3.58□□□□□ -1.84
Pcdha9Q91Y11 Gm24711-201ENSMUST00000178062 94 ntBASIC3.58□□□□□ -1.84
Pcdha9Q91Y11 Gm24609-201ENSMUST00000178166 94 ntBASIC3.58□□□□□ -1.84
Pcdha9Q91Y11 Gm23265-201ENSMUST00000178321 94 ntBASIC3.58□□□□□ -1.84
Pcdha9Q91Y11 Gm22812-201ENSMUST00000178329 94 ntBASIC3.58□□□□□ -1.84
Pcdha9Q91Y11 Snord116l3-201ENSMUST00000178370 94 ntBASIC3.58□□□□□ -1.84
Pcdha9Q91Y11 Gm26246-201ENSMUST00000178388 94 ntBASIC3.58□□□□□ -1.84
Pcdha9Q91Y11 Gm25155-201ENSMUST00000178450 94 ntBASIC3.58□□□□□ -1.84
Pcdha9Q91Y11 Gm24760-201ENSMUST00000178530 94 ntBASIC3.58□□□□□ -1.84
Pcdha9Q91Y11 Gm22285-201ENSMUST00000178576 94 ntBASIC3.58□□□□□ -1.84
Pcdha9Q91Y11 Gm22417-201ENSMUST00000178656 94 ntBASIC3.58□□□□□ -1.84
Pcdha9Q91Y11 Snord116l2-201ENSMUST00000178675 94 ntBASIC3.58□□□□□ -1.84
Pcdha9Q91Y11 Gm26270-201ENSMUST00000178690 94 ntBASIC3.58□□□□□ -1.84
Pcdha9Q91Y11 Snord116l16-201ENSMUST00000178777 94 ntBASIC3.58□□□□□ -1.84
Pcdha9Q91Y11 Gm23313-201ENSMUST00000178931 94 ntBASIC3.58□□□□□ -1.84
Pcdha9Q91Y11 Snord116l17-201ENSMUST00000178936 94 ntBASIC3.58□□□□□ -1.84
Pcdha9Q91Y11 Gm23089-201ENSMUST00000178947 94 ntBASIC3.58□□□□□ -1.84
Pcdha9Q91Y11 Snord116l10-201ENSMUST00000179053 94 ntBASIC3.58□□□□□ -1.84
Pcdha9Q91Y11 Gm24153-201ENSMUST00000179280 94 ntBASIC3.58□□□□□ -1.84
Pcdha9Q91Y11 Gm25597-201ENSMUST00000179388 94 ntBASIC3.58□□□□□ -1.84
Pcdha9Q91Y11 Snord116l1-201ENSMUST00000179518 94 ntBASIC3.58□□□□□ -1.84
Pcdha9Q91Y11 Gm25816-201ENSMUST00000179764 94 ntBASIC3.58□□□□□ -1.84
Pcdha9Q91Y11 Snord116l8-201ENSMUST00000179889 94 ntBASIC3.58□□□□□ -1.84
Pcdha9Q91Y11 Snord116l7-201ENSMUST00000179895 94 ntBASIC3.58□□□□□ -1.84
Pcdha9Q91Y11 Snord116l5-201ENSMUST00000179927 94 ntBASIC3.58□□□□□ -1.84
Pcdha9Q91Y11 Snord116l6-201ENSMUST00000179955 94 ntBASIC3.58□□□□□ -1.84
Pcdha9Q91Y11 Gm26188-201ENSMUST00000179963 94 ntBASIC3.58□□□□□ -1.84
Pcdha9Q91Y11 Gm26433-201ENSMUST00000180227 94 ntBASIC3.58□□□□□ -1.84
Pcdha9Q91Y11 Snord116l11-201ENSMUST00000180312 94 ntBASIC3.58□□□□□ -1.84
Pcdha9Q91Y11 Gm22128-201ENSMUST00000180346 94 ntBASIC3.58□□□□□ -1.84
Pcdha9Q91Y11 Gm27520-201ENSMUST00000184872 81 ntBASIC3.58□□□□□ -1.84
Pcdha9Q91Y11 Gm32033-201ENSMUST00000193483 339 ntBASIC3.58□□□□□ -1.84
Pcdha9Q91Y11 Gm42925-201ENSMUST00000197359 285 ntBASIC3.58□□□□□ -1.84
Pcdha9Q91Y11 Olfr277-ps1-201ENSMUST00000205749 285 ntBASIC3.58□□□□□ -1.84
Pcdha9Q91Y11 Gm18453-201ENSMUST00000208000 626 ntBASIC3.58□□□□□ -1.84
Pcdha9Q91Y11 Gm7422-201ENSMUST00000220115 640 ntBASIC3.58□□□□□ -1.84
Pcdha9Q91Y11 AC108416.2-201ENSMUST00000226792 367 ntBASIC3.58□□□□□ -1.84
Pcdha9Q91Y11 Gm23679-201ENSMUST00000083161 119 ntBASIC3.58□□□□□ -1.84
Pcdha9Q91Y11 Mup1-201ENSMUST00000084548 776 ntAPPRIS ALT2 TSL 3 BASIC3.58□□□□□ -1.84
Pcdha9Q91Y11 Gm42585-201ENSMUST00000198731 4020 ntBASIC3.58□□□□□ -1.84
Pcdha9Q91Y11 Vmn2r-ps104-201ENSMUST00000099416 1671 ntTSL 5 BASIC3.58□□□□□ -1.84
Pcdha9Q91Y11 Olfr1226-202ENSMUST00000214709 5270 ntAPPRIS P1 TSL 3 BASIC3.57□□□□□ -1.84
Pcdha9Q91Y11 Lrrd1-201ENSMUST00000044039 2951 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Pcdha9Q91Y11 Cbll1-201ENSMUST00000064240 3937 ntAPPRIS ALT1 TSL 5 BASIC3.57□□□□□ -1.84
Pcdha9Q91Y11 Pkhd1l1-202ENSMUST00000166957 12747 ntTSL 5 BASIC3.57□□□□□ -1.84
Pcdha9Q91Y11 Pkhd1l1-201ENSMUST00000038336 12741 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Pcdha9Q91Y11 Ighv15-2-201ENSMUST00000103497 351 ntAPPRIS ALT2 BASIC3.57□□□□□ -1.84
Pcdha9Q91Y11 Traj24-201ENSMUST00000103717 63 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Pcdha9Q91Y11 Gm14296-202ENSMUST00000108931 750 ntBASIC3.57□□□□□ -1.84
Pcdha9Q91Y11 Vmn1r-ps125-201ENSMUST00000117767 290 ntBASIC3.57□□□□□ -1.84
Pcdha9Q91Y11 Gm13717-201ENSMUST00000119868 365 ntBASIC3.57□□□□□ -1.84
Pcdha9Q91Y11 Gm14687-201ENSMUST00000120206 363 ntBASIC3.57□□□□□ -1.84
Pcdha9Q91Y11 Gm11363-201ENSMUST00000121672 548 ntBASIC3.57□□□□□ -1.84
Pcdha9Q91Y11 Gm12276-201ENSMUST00000121709 301 ntBASIC3.57□□□□□ -1.84
Pcdha9Q91Y11 Gm15521-201ENSMUST00000141752 835 ntTSL 2 BASIC3.57□□□□□ -1.84
Pcdha9Q91Y11 Gm28039-201ENSMUST00000149128 254 ntTSL 3 BASIC3.57□□□□□ -1.84
Pcdha9Q91Y11 Gm10075-201ENSMUST00000162030 545 ntBASIC3.57□□□□□ -1.84
Pcdha9Q91Y11 2210418O10Rik-204ENSMUST00000166464 750 ntBASIC3.57□□□□□ -1.84
Pcdha9Q91Y11 Gm20450-201ENSMUST00000173652 147 ntBASIC3.57□□□□□ -1.84
Pcdha9Q91Y11 Gm23053-201ENSMUST00000175136 96 ntBASIC3.57□□□□□ -1.84
Pcdha9Q91Y11 Gm22258-201ENSMUST00000177645 94 ntBASIC3.57□□□□□ -1.84
Pcdha9Q91Y11 Gm22131-201ENSMUST00000178415 94 ntBASIC3.57□□□□□ -1.84
Pcdha9Q91Y11 Gm26032-201ENSMUST00000178535 94 ntBASIC3.57□□□□□ -1.84
Pcdha9Q91Y11 Gm25210-201ENSMUST00000178813 94 ntBASIC3.57□□□□□ -1.84
Pcdha9Q91Y11 Gm25157-201ENSMUST00000178914 94 ntBASIC3.57□□□□□ -1.84
Pcdha9Q91Y11 Gm22046-201ENSMUST00000179027 94 ntBASIC3.57□□□□□ -1.84
Pcdha9Q91Y11 Gm22941-201ENSMUST00000179630 94 ntBASIC3.57□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 85.8 ms