Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 AC121804.2-201ENSMUST00000222531 316 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Rpa1Q8VEE4 AC166830.2-201ENSMUST00000225821 196 ntBASIC4.36□□□□□ -1.71
Rpa1Q8VEE4 Znrd1as-201ENSMUST00000040177 976 ntAPPRIS P2 TSL 1 (best) BASIC4.36□□□□□ -1.71
Rpa1Q8VEE4 Defa34-201ENSMUST00000075268 375 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
Rpa1Q8VEE4 Snord82-201ENSMUST00000082889 70 ntBASIC4.36□□□□□ -1.71
Rpa1Q8VEE4 Defa5-201ENSMUST00000098892 376 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Rpa1Q8VEE4 Vmn1r206-202ENSMUST00000227244 3970 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Rpa1Q8VEE4 Gpr34-202ENSMUST00000096492 1898 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Rpa1Q8VEE4 Gm28154-201ENSMUST00000186267 4218 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Rpa1Q8VEE4 Gm7145-201ENSMUST00000185381 1794 ntAPPRIS P1 TSL 3 BASIC4.35□□□□□ -1.71
Rpa1Q8VEE4 Vmn2r116-201ENSMUST00000164856 2571 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Rpa1Q8VEE4 Gm31371-201ENSMUST00000211848 2088 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Rpa1Q8VEE4 Gm14922-201ENSMUST00000121131 163 ntBASIC4.35□□□□□ -1.71
Rpa1Q8VEE4 Gm14303-201ENSMUST00000121320 171 ntBASIC4.35□□□□□ -1.71
Rpa1Q8VEE4 Gm12325-201ENSMUST00000135553 320 ntTSL 5 BASIC4.35□□□□□ -1.71
Rpa1Q8VEE4 Gm22870-201ENSMUST00000157501 112 ntBASIC4.35□□□□□ -1.71
Rpa1Q8VEE4 Gm25425-201ENSMUST00000157611 96 ntBASIC4.35□□□□□ -1.71
Rpa1Q8VEE4 Gm25615-201ENSMUST00000177836 94 ntBASIC4.35□□□□□ -1.71
Rpa1Q8VEE4 Mir7006-201ENSMUST00000183624 69 ntBASIC4.35□□□□□ -1.71
Rpa1Q8VEE4 Gm27355-201ENSMUST00000185045 128 ntBASIC4.35□□□□□ -1.71
Rpa1Q8VEE4 Gm19244-201ENSMUST00000204340 253 ntBASIC4.35□□□□□ -1.71
Rpa1Q8VEE4 Rpl18a-205ENSMUST00000212494 473 ntTSL 5 BASIC4.35□□□□□ -1.71
Rpa1Q8VEE4 AC131759.1-201ENSMUST00000220642 310 ntTSL 3 BASIC4.35□□□□□ -1.71
Rpa1Q8VEE4 Zfp595-201ENSMUST00000109735 3896 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
Rpa1Q8VEE4 2310001H17Rik-203ENSMUST00000181517 3981 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Rpa1Q8VEE4 Olfr1258-203ENSMUST00000213720 7098 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Rpa1Q8VEE4 Olfr787-202ENSMUST00000213329 4958 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Rpa1Q8VEE4 Cp-202ENSMUST00000091309 4029 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
Rpa1Q8VEE4 Gm10484-201ENSMUST00000196372 4759 ntBASIC4.34□□□□□ -1.71
Rpa1Q8VEE4 Vmn2r31-201ENSMUST00000075108 3660 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Rpa1Q8VEE4 A230057D06Rik-202ENSMUST00000207061 3717 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Rpa1Q8VEE4 Gm37899-201ENSMUST00000193116 8717 ntBASIC4.34□□□□□ -1.71
Rpa1Q8VEE4 Gm26026-201ENSMUST00000122726 123 ntBASIC4.34□□□□□ -1.71
Rpa1Q8VEE4 Gm26412-201ENSMUST00000157666 55 ntBASIC4.34□□□□□ -1.71
Rpa1Q8VEE4 Gm26310-201ENSMUST00000157766 117 ntBASIC4.34□□□□□ -1.71
Rpa1Q8VEE4 Gm22316-201ENSMUST00000158012 216 ntBASIC4.34□□□□□ -1.71
Rpa1Q8VEE4 Gm22537-201ENSMUST00000158172 199 ntBASIC4.34□□□□□ -1.71
Rpa1Q8VEE4 Gm23546-201ENSMUST00000158211 137 ntBASIC4.34□□□□□ -1.71
Rpa1Q8VEE4 Gm22516-201ENSMUST00000158266 124 ntBASIC4.34□□□□□ -1.71
Rpa1Q8VEE4 Gm25051-201ENSMUST00000158602 249 ntBASIC4.34□□□□□ -1.71
Rpa1Q8VEE4 Gm16289-201ENSMUST00000162079 183 ntBASIC4.34□□□□□ -1.71
Rpa1Q8VEE4 Cox6b2-206ENSMUST00000182738 423 ntTSL 2 BASIC4.34□□□□□ -1.71
Rpa1Q8VEE4 Gm29104-201ENSMUST00000186304 222 ntBASIC4.34□□□□□ -1.71
Rpa1Q8VEE4 Mgst1-208ENSMUST00000204628 471 ntTSL 3 BASIC4.34□□□□□ -1.71
Rpa1Q8VEE4 Calml4-203ENSMUST00000213643 710 ntTSL 2 BASIC4.34□□□□□ -1.71
Rpa1Q8VEE4 Gm22220-201ENSMUST00000082671 149 ntBASIC4.34□□□□□ -1.71
Rpa1Q8VEE4 Gm7676-201ENSMUST00000084055 319 ntBASIC4.34□□□□□ -1.71
Rpa1Q8VEE4 Rmi1-202ENSMUST00000224479 4212 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Rpa1Q8VEE4 Gm44525-201ENSMUST00000183129 2634 ntBASIC4.34□□□□□ -1.72
Rpa1Q8VEE4 Olfr309-202ENSMUST00000174158 3293 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.72
Rpa1Q8VEE4 Olfr1097-201ENSMUST00000111576 4705 ntAPPRIS P1 TSL 3 BASIC4.34□□□□□ -1.72
Rpa1Q8VEE4 Gm37645-201ENSMUST00000194285 3556 ntBASIC4.33□□□□□ -1.72
Rpa1Q8VEE4 Gm13912-201ENSMUST00000156541 1860 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Rpa1Q8VEE4 AC153563.1-202ENSMUST00000217695 1838 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Rpa1Q8VEE4 Gm23472-201ENSMUST00000101806 191 ntBASIC4.33□□□□□ -1.72
Rpa1Q8VEE4 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Rpa1Q8VEE4 Tcrg-V4-201ENSMUST00000103554 426 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Rpa1Q8VEE4 Gm25096-201ENSMUST00000104043 129 ntBASIC4.33□□□□□ -1.72
Rpa1Q8VEE4 Gm24160-201ENSMUST00000104594 126 ntBASIC4.33□□□□□ -1.72
Rpa1Q8VEE4 Defa-ps15-201ENSMUST00000118178 477 ntBASIC4.33□□□□□ -1.72
Rpa1Q8VEE4 Gm13213-201ENSMUST00000119668 474 ntBASIC4.33□□□□□ -1.72
Rpa1Q8VEE4 Gm5396-201ENSMUST00000121222 532 ntBASIC4.33□□□□□ -1.72
Rpa1Q8VEE4 Gm13149-201ENSMUST00000122071 339 ntBASIC4.33□□□□□ -1.72
Rpa1Q8VEE4 Scarna6-201ENSMUST00000158656 265 ntBASIC4.33□□□□□ -1.72
Rpa1Q8VEE4 Gm24497-201ENSMUST00000177868 191 ntBASIC4.33□□□□□ -1.72
Rpa1Q8VEE4 H2al1k-201ENSMUST00000178196 510 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Rpa1Q8VEE4 Gm27535-201ENSMUST00000183814 157 ntBASIC4.33□□□□□ -1.72
Rpa1Q8VEE4 Rps26-ps1-202ENSMUST00000212102 351 ntBASIC4.33□□□□□ -1.72
Rpa1Q8VEE4 AC121942.2-201ENSMUST00000223824 600 ntBASIC4.33□□□□□ -1.72
Rpa1Q8VEE4 AC124549.1-201ENSMUST00000225912 333 ntBASIC4.33□□□□□ -1.72
Rpa1Q8VEE4 Gm23444-201ENSMUST00000082922 191 ntBASIC4.33□□□□□ -1.72
Rpa1Q8VEE4 Zfp990-201ENSMUST00000105741 3044 ntAPPRIS P1 TSL 3 BASIC4.33□□□□□ -1.72
Rpa1Q8VEE4 Olfr136-202ENSMUST00000208525 2534 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Rpa1Q8VEE4 Gm2093-201ENSMUST00000180518 3526 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Rpa1Q8VEE4 Gm8935-202ENSMUST00000105727 1959 ntBASIC4.33□□□□□ -1.72
Rpa1Q8VEE4 Abi3bp-204ENSMUST00000171000 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
Rpa1Q8VEE4 Gm4567-202ENSMUST00000190554 1581 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Rpa1Q8VEE4 Gm10668-202ENSMUST00000191073 1581 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Rpa1Q8VEE4 Gm6902-202ENSMUST00000191169 1581 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Rpa1Q8VEE4 B230334C09Rik-201ENSMUST00000200255 8927 ntBASIC4.32□□□□□ -1.72
Rpa1Q8VEE4 Gm6176-202ENSMUST00000207633 1581 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Rpa1Q8VEE4 Olfr1484-202ENSMUST00000208104 3621 ntTSL 2 BASIC4.32□□□□□ -1.72
Rpa1Q8VEE4 Gm23013-201ENSMUST00000104146 106 ntBASIC4.32□□□□□ -1.72
Rpa1Q8VEE4 Gm25269-201ENSMUST00000122601 104 ntBASIC4.32□□□□□ -1.72
Rpa1Q8VEE4 Gm24251-201ENSMUST00000157324 114 ntBASIC4.32□□□□□ -1.72
Rpa1Q8VEE4 Gm22215-201ENSMUST00000157558 96 ntBASIC4.32□□□□□ -1.72
Rpa1Q8VEE4 Gm22529-201ENSMUST00000158817 123 ntBASIC4.32□□□□□ -1.72
Rpa1Q8VEE4 Gm23702-201ENSMUST00000158840 130 ntBASIC4.32□□□□□ -1.72
Rpa1Q8VEE4 Gm25369-201ENSMUST00000158848 132 ntBASIC4.32□□□□□ -1.72
Rpa1Q8VEE4 Gm28976-201ENSMUST00000188070 144 ntBASIC4.32□□□□□ -1.72
Rpa1Q8VEE4 Gm43236-201ENSMUST00000197414 313 ntTSL 5 BASIC4.32□□□□□ -1.72
Rpa1Q8VEE4 Gm43730-201ENSMUST00000199863 372 ntBASIC4.32□□□□□ -1.72
Rpa1Q8VEE4 4930598N05Rik-207ENSMUST00000208997 83 ntTSL 5 BASIC4.32□□□□□ -1.72
Rpa1Q8VEE4 Gm35857-201ENSMUST00000212739 178 ntBASIC4.32□□□□□ -1.72
Rpa1Q8VEE4 Gm45907-201ENSMUST00000213023 193 ntBASIC4.32□□□□□ -1.72
Rpa1Q8VEE4 Gm35041-201ENSMUST00000219581 602 ntTSL 3 BASIC4.32□□□□□ -1.72
Rpa1Q8VEE4 AC154636.2-201ENSMUST00000222538 161 ntBASIC4.32□□□□□ -1.72
Rpa1Q8VEE4 AC107757.3-201ENSMUST00000226312 535 ntBASIC4.32□□□□□ -1.72
Rpa1Q8VEE4 Skint4-202ENSMUST00000106564 3997 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
Rpa1Q8VEE4 Skint4-204ENSMUST00000106566 3997 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 108 ms