Protein–RNA interactions for Protein: Q8K2Z2

Prpf39, Pre-mRNA-processing factor 39, mousemouse

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf39Q8K2Z2 U2surp-202ENSMUST00000079659 7630 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
Prpf39Q8K2Z2 Gm22936-201ENSMUST00000103955 126 ntBASIC2.72□□□□□ -1.97
Prpf39Q8K2Z2 Gm11285-201ENSMUST00000118443 322 ntBASIC2.72□□□□□ -1.97
Prpf39Q8K2Z2 Gm14362-201ENSMUST00000121679 273 ntBASIC2.72□□□□□ -1.97
Prpf39Q8K2Z2 Gm6568-201ENSMUST00000122274 697 ntBASIC2.72□□□□□ -1.97
Prpf39Q8K2Z2 Gm15254-201ENSMUST00000149567 273 ntBASIC2.72□□□□□ -1.97
Prpf39Q8K2Z2 Gm23068-201ENSMUST00000158239 293 ntBASIC2.72□□□□□ -1.97
Prpf39Q8K2Z2 Gm26406-201ENSMUST00000158503 124 ntBASIC2.72□□□□□ -1.97
Prpf39Q8K2Z2 Gm10715-202ENSMUST00000177969 681 ntAPPRIS P5 TSL 5 BASIC2.72□□□□□ -1.97
Prpf39Q8K2Z2 Gm23379-201ENSMUST00000180026 107 ntBASIC2.72□□□□□ -1.97
Prpf39Q8K2Z2 Gm23144-201ENSMUST00000180226 107 ntBASIC2.72□□□□□ -1.97
Prpf39Q8K2Z2 Mir6386-201ENSMUST00000183558 104 ntBASIC2.72□□□□□ -1.97
Prpf39Q8K2Z2 Gm27379-201ENSMUST00000183730 123 ntBASIC2.72□□□□□ -1.97
Prpf39Q8K2Z2 Sumo1-203ENSMUST00000185265 532 ntTSL 3 BASIC2.72□□□□□ -1.97
Prpf39Q8K2Z2 Gm37228-201ENSMUST00000193574 331 ntTSL 5 BASIC2.72□□□□□ -1.97
Prpf39Q8K2Z2 Gm6615-201ENSMUST00000199426 631 ntBASIC2.72□□□□□ -1.97
Prpf39Q8K2Z2 AC159475.1-201ENSMUST00000216752 411 ntTSL 5 BASIC2.72□□□□□ -1.97
Prpf39Q8K2Z2 AC160031.2-201ENSMUST00000218242 274 ntBASIC2.72□□□□□ -1.97
Prpf39Q8K2Z2 Gm6030-201ENSMUST00000078768 402 ntBASIC2.72□□□□□ -1.97
Prpf39Q8K2Z2 1110057P08Rik-201ENSMUST00000089097 465 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
Prpf39Q8K2Z2 Gm45461-201ENSMUST00000211726 4535 ntBASIC2.72□□□□□ -1.97
Prpf39Q8K2Z2 CT009504.1-201ENSMUST00000218252 3330 ntBASIC2.72□□□□□ -1.97
Prpf39Q8K2Z2 Slitrk6-201ENSMUST00000078386 4240 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
Prpf39Q8K2Z2 Gm5596-201ENSMUST00000207988 2421 ntBASIC2.71□□□□□ -1.98
Prpf39Q8K2Z2 Olfr509-202ENSMUST00000213756 3547 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
Prpf39Q8K2Z2 Olfr1466-202ENSMUST00000207124 1981 ntAPPRIS P1 TSL 3 BASIC2.71□□□□□ -1.98
Prpf39Q8K2Z2 Gm23747-201ENSMUST00000104228 131 ntBASIC2.71□□□□□ -1.98
Prpf39Q8K2Z2 Gm26147-201ENSMUST00000104479 114 ntBASIC2.71□□□□□ -1.98
Prpf39Q8K2Z2 Gm25507-201ENSMUST00000116981 144 ntBASIC2.71□□□□□ -1.98
Prpf39Q8K2Z2 Gm13368-201ENSMUST00000122443 430 ntBASIC2.71□□□□□ -1.98
Prpf39Q8K2Z2 Gm26411-201ENSMUST00000157668 107 ntBASIC2.71□□□□□ -1.98
Prpf39Q8K2Z2 Mir5099-201ENSMUST00000175257 74 ntBASIC2.71□□□□□ -1.98
Prpf39Q8K2Z2 Gm22166-201ENSMUST00000178419 121 ntBASIC2.71□□□□□ -1.98
Prpf39Q8K2Z2 Gm22851-201ENSMUST00000178741 94 ntBASIC2.71□□□□□ -1.98
Prpf39Q8K2Z2 Gm25074-201ENSMUST00000178782 94 ntBASIC2.71□□□□□ -1.98
Prpf39Q8K2Z2 Gm23288-201ENSMUST00000179213 121 ntBASIC2.71□□□□□ -1.98
Prpf39Q8K2Z2 Gm26870-201ENSMUST00000181242 1170 ntTSL 5 BASIC2.71□□□□□ -1.98
Prpf39Q8K2Z2 Gm28000-201ENSMUST00000184380 85 ntBASIC2.71□□□□□ -1.98
Prpf39Q8K2Z2 Gm28597-201ENSMUST00000187664 666 ntBASIC2.71□□□□□ -1.98
Prpf39Q8K2Z2 Gm37279-201ENSMUST00000194630 338 ntTSL 5 BASIC2.71□□□□□ -1.98
Prpf39Q8K2Z2 Gm42604-201ENSMUST00000200077 801 ntTSL 3 BASIC2.71□□□□□ -1.98
Prpf39Q8K2Z2 Gm42530-201ENSMUST00000202683 550 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
Prpf39Q8K2Z2 Gm44524-201ENSMUST00000203899 271 ntBASIC2.71□□□□□ -1.98
Prpf39Q8K2Z2 Olfr848-ps1-201ENSMUST00000212241 930 ntBASIC2.71□□□□□ -1.98
Prpf39Q8K2Z2 AC120394.1-201ENSMUST00000217153 351 ntBASIC2.71□□□□□ -1.98
Prpf39Q8K2Z2 Lilr4b-211ENSMUST00000219661 1143 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
Prpf39Q8K2Z2 AC140477.1-201ENSMUST00000222354 246 ntBASIC2.71□□□□□ -1.98
Prpf39Q8K2Z2 Mir124a-3-201ENSMUST00000083520 68 ntBASIC2.71□□□□□ -1.98
Prpf39Q8K2Z2 Gm42942-201ENSMUST00000196086 1328 ntBASIC2.7□□□□□ -1.98
Prpf39Q8K2Z2 Olfr1025-ps1-202ENSMUST00000213474 3578 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
Prpf39Q8K2Z2 Olfr726-204ENSMUST00000215105 1752 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
Prpf39Q8K2Z2 Gm11042-201ENSMUST00000110441 120 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
Prpf39Q8K2Z2 Gm11065-201ENSMUST00000111462 228 ntBASIC2.7□□□□□ -1.98
Prpf39Q8K2Z2 Gm9732-201ENSMUST00000111874 492 ntAPPRIS ALT2 TSL 5 BASIC2.7□□□□□ -1.98
Prpf39Q8K2Z2 Klra10-201ENSMUST00000112020 823 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
Prpf39Q8K2Z2 Gm6954-201ENSMUST00000117416 225 ntBASIC2.7□□□□□ -1.98
Prpf39Q8K2Z2 Gm12006-201ENSMUST00000120786 403 ntBASIC2.7□□□□□ -1.98
Prpf39Q8K2Z2 1700119I11Rik-201ENSMUST00000122270 336 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
Prpf39Q8K2Z2 Gm7209-201ENSMUST00000122339 333 ntBASIC2.7□□□□□ -1.98
Prpf39Q8K2Z2 n-R5s207-201ENSMUST00000122497 118 ntBASIC2.7□□□□□ -1.98
Prpf39Q8K2Z2 Gm17062-201ENSMUST00000166987 461 ntBASIC2.7□□□□□ -1.98
Prpf39Q8K2Z2 Ifi206-202ENSMUST00000169797 429 ntTSL 5 BASIC2.7□□□□□ -1.98
Prpf39Q8K2Z2 Obox1-203ENSMUST00000172881 821 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
Prpf39Q8K2Z2 Ranbp2-ps4-201ENSMUST00000183481 385 ntBASIC2.7□□□□□ -1.98
Prpf39Q8K2Z2 Mir6363-201ENSMUST00000184880 114 ntBASIC2.7□□□□□ -1.98
Prpf39Q8K2Z2 Gm27919-201ENSMUST00000185163 107 ntBASIC2.7□□□□□ -1.98
Prpf39Q8K2Z2 Smr3a-202ENSMUST00000189633 467 ntAPPRIS ALT2 TSL 5 BASIC2.7□□□□□ -1.98
Prpf39Q8K2Z2 Gm32222-201ENSMUST00000203296 298 ntBASIC2.7□□□□□ -1.98
Prpf39Q8K2Z2 AC155923.1-201ENSMUST00000215676 356 ntBASIC2.7□□□□□ -1.98
Prpf39Q8K2Z2 AC167192.1-201ENSMUST00000225908 139 ntBASIC2.7□□□□□ -1.98
Prpf39Q8K2Z2 CT025689.4-201ENSMUST00000225926 601 ntBASIC2.7□□□□□ -1.98
Prpf39Q8K2Z2 AC156790.3-201ENSMUST00000226200 254 ntBASIC2.7□□□□□ -1.98
Prpf39Q8K2Z2 Olfr937-201ENSMUST00000055567 936 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
Prpf39Q8K2Z2 Olfr823-201ENSMUST00000081469 948 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
Prpf39Q8K2Z2 Gm24268-201ENSMUST00000082990 110 ntBASIC2.7□□□□□ -1.98
Prpf39Q8K2Z2 Vmn2r71-201ENSMUST00000172338 2568 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
Prpf39Q8K2Z2 Olfr1454-202ENSMUST00000213806 3906 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
Prpf39Q8K2Z2 Gm13136-201ENSMUST00000121031 2950 ntBASIC2.7□□□□□ -1.98
Prpf39Q8K2Z2 Gm34240-201ENSMUST00000192500 1936 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
Prpf39Q8K2Z2 Gm14429-201ENSMUST00000121881 2024 ntBASIC2.69□□□□□ -1.98
Prpf39Q8K2Z2 Olfr420-202ENSMUST00000213748 3806 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
Prpf39Q8K2Z2 Mir450-2-201ENSMUST00000102444 69 ntBASIC2.69□□□□□ -1.98
Prpf39Q8K2Z2 Igkv8-16-201ENSMUST00000103392 362 ntAPPRIS ALT2 BASIC2.69□□□□□ -1.98
Prpf39Q8K2Z2 Gm14766-201ENSMUST00000121689 367 ntBASIC2.69□□□□□ -1.98
Prpf39Q8K2Z2 Gm25945-201ENSMUST00000122484 135 ntBASIC2.69□□□□□ -1.98
Prpf39Q8K2Z2 Gm23124-201ENSMUST00000157650 107 ntBASIC2.69□□□□□ -1.98
Prpf39Q8K2Z2 Gm8580-201ENSMUST00000160295 464 ntBASIC2.69□□□□□ -1.98
Prpf39Q8K2Z2 Vmn1r-ps86-201ENSMUST00000174052 547 ntBASIC2.69□□□□□ -1.98
Prpf39Q8K2Z2 Vmn1r-ps47-201ENSMUST00000176694 907 ntBASIC2.69□□□□□ -1.98
Prpf39Q8K2Z2 Mir6335-201ENSMUST00000184081 98 ntBASIC2.69□□□□□ -1.98
Prpf39Q8K2Z2 Gm27608-201ENSMUST00000184822 162 ntBASIC2.69□□□□□ -1.98
Prpf39Q8K2Z2 Gm20058-201ENSMUST00000186939 284 ntBASIC2.69□□□□□ -1.98
Prpf39Q8K2Z2 Gm10193-201ENSMUST00000188288 231 ntBASIC2.69□□□□□ -1.98
Prpf39Q8K2Z2 Gm37869-201ENSMUST00000193385 595 ntBASIC2.69□□□□□ -1.98
Prpf39Q8K2Z2 Gm37754-201ENSMUST00000194406 452 ntTSL 5 BASIC2.69□□□□□ -1.98
Prpf39Q8K2Z2 Igkv13-64-201ENSMUST00000198143 343 ntBASIC2.69□□□□□ -1.98
Prpf39Q8K2Z2 Gm44011-201ENSMUST00000203336 394 ntBASIC2.69□□□□□ -1.98
Prpf39Q8K2Z2 Gm44903-201ENSMUST00000206840 130 ntBASIC2.69□□□□□ -1.98
Prpf39Q8K2Z2 AL935138.1-201ENSMUST00000215309 196 ntBASIC2.69□□□□□ -1.98
Prpf39Q8K2Z2 AC138401.1-201ENSMUST00000221533 116 ntBASIC2.69□□□□□ -1.98
Retrieved 100 of 76,532 protein–RNA pairs in 82.9 ms