Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Gm12006-201ENSMUST00000120786 403 ntBASIC3.09□□□□□ -1.91
Nup88Q8CEC0 Gm15218-201ENSMUST00000131006 618 ntTSL 5 BASIC3.09□□□□□ -1.91
Nup88Q8CEC0 Pfdn4-205ENSMUST00000136839 452 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
Nup88Q8CEC0 Gm26870-201ENSMUST00000181242 1170 ntTSL 5 BASIC3.09□□□□□ -1.91
Nup88Q8CEC0 Gm8739-201ENSMUST00000185962 181 ntTSL 5 BASIC3.09□□□□□ -1.91
Nup88Q8CEC0 Trbv7-201ENSMUST00000193339 402 ntBASIC3.09□□□□□ -1.91
Nup88Q8CEC0 Gm43402-201ENSMUST00000197159 159 ntBASIC3.09□□□□□ -1.91
Nup88Q8CEC0 Gm44142-201ENSMUST00000203358 311 ntBASIC3.09□□□□□ -1.91
Nup88Q8CEC0 AC091764.1-201ENSMUST00000218029 132 ntTSL 5 BASIC3.09□□□□□ -1.91
Nup88Q8CEC0 4930469K13Rik-203ENSMUST00000224226 243 ntAPPRIS ALT2 BASIC3.09□□□□□ -1.91
Nup88Q8CEC0 Olfr478-201ENSMUST00000049719 945 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
Nup88Q8CEC0 Gm26228-201ENSMUST00000082512 107 ntBASIC3.09□□□□□ -1.91
Nup88Q8CEC0 Gm25080-201ENSMUST00000082526 107 ntBASIC3.09□□□□□ -1.91
Nup88Q8CEC0 Gm25859-201ENSMUST00000083710 91 ntBASIC3.09□□□□□ -1.91
Nup88Q8CEC0 Gm25518-201ENSMUST00000083864 107 ntBASIC3.09□□□□□ -1.91
Nup88Q8CEC0 Cp-202ENSMUST00000091309 4029 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.92
Nup88Q8CEC0 AC152159.1-201ENSMUST00000226719 2769 ntBASIC3.09□□□□□ -1.92
Nup88Q8CEC0 Tlr7-203ENSMUST00000112164 3468 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
Nup88Q8CEC0 Gm26247-201ENSMUST00000116702 91 ntBASIC3.08□□□□□ -1.92
Nup88Q8CEC0 Gm11253-201ENSMUST00000118486 201 ntBASIC3.08□□□□□ -1.92
Nup88Q8CEC0 Gm24436-201ENSMUST00000157889 302 ntBASIC3.08□□□□□ -1.92
Nup88Q8CEC0 Klra5-204ENSMUST00000169901 792 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
Nup88Q8CEC0 Obox4-ps6-201ENSMUST00000176578 724 ntBASIC3.08□□□□□ -1.92
Nup88Q8CEC0 Mir7068-201ENSMUST00000183439 74 ntBASIC3.08□□□□□ -1.92
Nup88Q8CEC0 Gm28343-201ENSMUST00000185386 112 ntBASIC3.08□□□□□ -1.92
Nup88Q8CEC0 4930437M23Rik-201ENSMUST00000197456 968 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
Nup88Q8CEC0 CT025606.1-201ENSMUST00000218273 324 ntBASIC3.08□□□□□ -1.92
Nup88Q8CEC0 Gm7422-201ENSMUST00000220115 640 ntBASIC3.08□□□□□ -1.92
Nup88Q8CEC0 AC122484.1-201ENSMUST00000221578 177 ntBASIC3.08□□□□□ -1.92
Nup88Q8CEC0 AC154506.1-201ENSMUST00000225178 621 ntBASIC3.08□□□□□ -1.92
Nup88Q8CEC0 Olfr835-202ENSMUST00000213018 2690 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Nup88Q8CEC0 Olfr420-202ENSMUST00000213748 3806 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Nup88Q8CEC0 Igkv8-16-201ENSMUST00000103392 362 ntAPPRIS ALT2 BASIC3.07□□□□□ -1.92
Nup88Q8CEC0 Gm24889-201ENSMUST00000104388 132 ntBASIC3.07□□□□□ -1.92
Nup88Q8CEC0 Gm25773-201ENSMUST00000116718 127 ntBASIC3.07□□□□□ -1.92
Nup88Q8CEC0 Gm24546-201ENSMUST00000158652 102 ntBASIC3.07□□□□□ -1.92
Nup88Q8CEC0 Gm22500-201ENSMUST00000158982 99 ntBASIC3.07□□□□□ -1.92
Nup88Q8CEC0 Gm15562-201ENSMUST00000161397 426 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
Nup88Q8CEC0 Gm17224-201ENSMUST00000171429 500 ntTSL 3 BASIC3.07□□□□□ -1.92
Nup88Q8CEC0 Mir3076-201ENSMUST00000175415 60 ntBASIC3.07□□□□□ -1.92
Nup88Q8CEC0 Gm20718-201ENSMUST00000176058 259 ntBASIC3.07□□□□□ -1.92
Nup88Q8CEC0 Gm27236-201ENSMUST00000184147 442 ntBASIC3.07□□□□□ -1.92
Nup88Q8CEC0 Gm28489-201ENSMUST00000186655 316 ntBASIC3.07□□□□□ -1.92
Nup88Q8CEC0 Gm28925-201ENSMUST00000188586 168 ntBASIC3.07□□□□□ -1.92
Nup88Q8CEC0 Gm42647-201ENSMUST00000195939 459 ntBASIC3.07□□□□□ -1.92
Nup88Q8CEC0 Gm43140-201ENSMUST00000197317 456 ntTSL 2 BASIC3.07□□□□□ -1.92
Nup88Q8CEC0 Gm42604-201ENSMUST00000200077 801 ntTSL 3 BASIC3.07□□□□□ -1.92
Nup88Q8CEC0 Scgb1a1-201ENSMUST00000025554 476 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
Nup88Q8CEC0 Tgif2lx2-201ENSMUST00000072518 1030 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
Nup88Q8CEC0 Tgif2lx1-201ENSMUST00000073857 1030 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
Nup88Q8CEC0 Olfr917-201ENSMUST00000076542 930 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
Nup88Q8CEC0 Skint9-201ENSMUST00000058605 1372 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
Nup88Q8CEC0 Olfr116-202ENSMUST00000216128 4477 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
Nup88Q8CEC0 Rps24-ps3-201ENSMUST00000118723 402 ntBASIC3.06□□□□□ -1.92
Nup88Q8CEC0 Gm1993-201ENSMUST00000120268 1131 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
Nup88Q8CEC0 Gm14069-201ENSMUST00000120815 229 ntBASIC3.06□□□□□ -1.92
Nup88Q8CEC0 Gm14841-201ENSMUST00000121067 758 ntBASIC3.06□□□□□ -1.92
Nup88Q8CEC0 Spink2-203ENSMUST00000121825 643 ntAPPRIS ALT2 TSL 3 BASIC3.06□□□□□ -1.92
Nup88Q8CEC0 Gm22026-201ENSMUST00000122735 281 ntBASIC3.06□□□□□ -1.92
Nup88Q8CEC0 Gm23599-201ENSMUST00000157261 251 ntBASIC3.06□□□□□ -1.92
Nup88Q8CEC0 Gm22038-201ENSMUST00000157277 242 ntBASIC3.06□□□□□ -1.92
Nup88Q8CEC0 Gm26414-201ENSMUST00000157674 269 ntBASIC3.06□□□□□ -1.92
Nup88Q8CEC0 Gm8114-201ENSMUST00000172225 484 ntBASIC3.06□□□□□ -1.92
Nup88Q8CEC0 Gm20794-201ENSMUST00000177626 628 ntBASIC3.06□□□□□ -1.92
Nup88Q8CEC0 Gm21827-201ENSMUST00000178247 423 ntBASIC3.06□□□□□ -1.92
Nup88Q8CEC0 Gm21744-201ENSMUST00000178403 662 ntBASIC3.06□□□□□ -1.92
Nup88Q8CEC0 Gm21171-201ENSMUST00000180048 673 ntBASIC3.06□□□□□ -1.92
Nup88Q8CEC0 Mir6335-201ENSMUST00000184081 98 ntBASIC3.06□□□□□ -1.92
Nup88Q8CEC0 Gm28900-201ENSMUST00000185232 156 ntBASIC3.06□□□□□ -1.92
Nup88Q8CEC0 Gm29413-201ENSMUST00000186019 880 ntBASIC3.06□□□□□ -1.92
Nup88Q8CEC0 Gm28870-201ENSMUST00000187033 880 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
Nup88Q8CEC0 Gm28700-201ENSMUST00000187614 579 ntBASIC3.06□□□□□ -1.92
Nup88Q8CEC0 Gm29639-201ENSMUST00000188375 580 ntBASIC3.06□□□□□ -1.92
Nup88Q8CEC0 Gm28843-201ENSMUST00000189198 678 ntBASIC3.06□□□□□ -1.92
Nup88Q8CEC0 Gm29546-201ENSMUST00000191171 678 ntBASIC3.06□□□□□ -1.92
Nup88Q8CEC0 Gm9696-202ENSMUST00000191541 830 ntBASIC3.06□□□□□ -1.92
Nup88Q8CEC0 Gm31123-201ENSMUST00000192094 666 ntBASIC3.06□□□□□ -1.92
Nup88Q8CEC0 Gm37337-201ENSMUST00000192601 993 ntBASIC3.06□□□□□ -1.92
Nup88Q8CEC0 Gm37616-201ENSMUST00000193974 322 ntBASIC3.06□□□□□ -1.92
Nup88Q8CEC0 Gm19252-201ENSMUST00000204705 305 ntBASIC3.06□□□□□ -1.92
Nup88Q8CEC0 Gm45687-201ENSMUST00000209454 155 ntBASIC3.06□□□□□ -1.92
Nup88Q8CEC0 2900042G08Rik-201ENSMUST00000221776 650 ntBASIC3.06□□□□□ -1.92
Nup88Q8CEC0 AC140477.1-201ENSMUST00000222354 246 ntBASIC3.06□□□□□ -1.92
Nup88Q8CEC0 AC116656.1-201ENSMUST00000227040 755 ntBASIC3.06□□□□□ -1.92
Nup88Q8CEC0 Gm22247-201ENSMUST00000082476 131 ntBASIC3.06□□□□□ -1.92
Nup88Q8CEC0 Gm23723-201ENSMUST00000082996 132 ntBASIC3.06□□□□□ -1.92
Nup88Q8CEC0 Gm10267-201ENSMUST00000091916 258 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
Nup88Q8CEC0 Mir452-201ENSMUST00000093629 85 ntBASIC3.06□□□□□ -1.92
Nup88Q8CEC0 Gm44230-201ENSMUST00000203032 3550 ntBASIC3.06□□□□□ -1.92
Nup88Q8CEC0 Gm8978-201ENSMUST00000124230 2224 ntTSL 5 BASIC3.05□□□□□ -1.92
Nup88Q8CEC0 Gm381-201ENSMUST00000117443 2037 ntBASIC3.05□□□□□ -1.92
Nup88Q8CEC0 N4bp2l2-201ENSMUST00000118316 8982 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
Nup88Q8CEC0 Olfr509-202ENSMUST00000213756 3547 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
Nup88Q8CEC0 Olfr1132-202ENSMUST00000216082 3260 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
Nup88Q8CEC0 Gm42942-201ENSMUST00000196086 1328 ntBASIC3.05□□□□□ -1.92
Nup88Q8CEC0 Gm45257-201ENSMUST00000210301 3998 ntBASIC3.05□□□□□ -1.92
Nup88Q8CEC0 Rhox11-ps1-201ENSMUST00000121945 387 ntBASIC3.05□□□□□ -1.92
Nup88Q8CEC0 Gm24839-201ENSMUST00000122602 107 ntBASIC3.05□□□□□ -1.92
Nup88Q8CEC0 Rab7b-203ENSMUST00000129905 476 ntTSL 2 BASIC3.05□□□□□ -1.92
Nup88Q8CEC0 5330434G04Rik-201ENSMUST00000130264 511 ntTSL 3 BASIC3.05□□□□□ -1.92
Retrieved 100 of 76,532 protein–RNA pairs in 101.9 ms