Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Gm45809-201ENSMUST00000211661 3894 ntBASIC4.6□□□□□ -1.67
Usp40Q8BWR4 Olfr792-202ENSMUST00000215436 2113 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Usp40Q8BWR4 Erbin-205ENSMUST00000188997 5084 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
Usp40Q8BWR4 Zfp990-201ENSMUST00000105741 3044 ntAPPRIS P1 TSL 3 BASIC4.59□□□□□ -1.67
Usp40Q8BWR4 AC154313.1-201ENSMUST00000217755 3841 ntBASIC4.59□□□□□ -1.67
Usp40Q8BWR4 Lrrtm2-201ENSMUST00000091636 5665 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Usp40Q8BWR4 Gm2066-201ENSMUST00000118046 389 ntBASIC4.59□□□□□ -1.67
Usp40Q8BWR4 Gm8840-201ENSMUST00000122454 386 ntBASIC4.59□□□□□ -1.67
Usp40Q8BWR4 Hba-ps4-201ENSMUST00000128900 447 ntBASIC4.59□□□□□ -1.67
Usp40Q8BWR4 Gm22814-201ENSMUST00000157452 104 ntBASIC4.59□□□□□ -1.67
Usp40Q8BWR4 Gm24138-201ENSMUST00000157572 114 ntBASIC4.59□□□□□ -1.67
Usp40Q8BWR4 Gm22389-201ENSMUST00000158193 301 ntBASIC4.59□□□□□ -1.67
Usp40Q8BWR4 Gm15562-201ENSMUST00000161397 426 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Usp40Q8BWR4 Gm22308-201ENSMUST00000177609 107 ntBASIC4.59□□□□□ -1.67
Usp40Q8BWR4 Gm29104-201ENSMUST00000186304 222 ntBASIC4.59□□□□□ -1.67
Usp40Q8BWR4 Trav17-202ENSMUST00000186545 338 ntAPPRIS ALT2 BASIC4.59□□□□□ -1.67
Usp40Q8BWR4 Gm28920-201ENSMUST00000189957 699 ntBASIC4.59□□□□□ -1.67
Usp40Q8BWR4 4930420N18Rik-201ENSMUST00000191831 676 ntBASIC4.59□□□□□ -1.67
Usp40Q8BWR4 Gm6176-202ENSMUST00000207633 1581 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Usp40Q8BWR4 Gm19126-201ENSMUST00000207896 509 ntBASIC4.59□□□□□ -1.67
Usp40Q8BWR4 Olfr1009-203ENSMUST00000216443 4047 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Usp40Q8BWR4 CT030161.1-201ENSMUST00000218411 124 ntBASIC4.59□□□□□ -1.67
Usp40Q8BWR4 CT010444.1-201ENSMUST00000219963 3845 ntBASIC4.59□□□□□ -1.67
Usp40Q8BWR4 AC164561.1-201ENSMUST00000220414 115 ntBASIC4.59□□□□□ -1.67
Usp40Q8BWR4 AC163357.1-201ENSMUST00000220847 233 ntBASIC4.59□□□□□ -1.67
Usp40Q8BWR4 Gm26129-201ENSMUST00000082719 107 ntBASIC4.59□□□□□ -1.67
Usp40Q8BWR4 Mir99a-201ENSMUST00000083596 65 ntBASIC4.59□□□□□ -1.67
Usp40Q8BWR4 Gm5670-201ENSMUST00000093546 372 ntBASIC4.59□□□□□ -1.67
Usp40Q8BWR4 Nlrp4b-202ENSMUST00000117413 3326 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
Usp40Q8BWR4 Gm14014-201ENSMUST00000156718 2717 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
Usp40Q8BWR4 Olfr361-202ENSMUST00000214969 2749 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.68
Usp40Q8BWR4 Vmn1r81-205ENSMUST00000228764 13763 ntAPPRIS P2 BASIC4.58□□□□□ -1.68
Usp40Q8BWR4 Gm13972-201ENSMUST00000153726 3164 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Usp40Q8BWR4 Vmn2r42-205ENSMUST00000146278 3086 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
Usp40Q8BWR4 Zfp788-201ENSMUST00000045720 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
Usp40Q8BWR4 Cp-205ENSMUST00000108329 4564 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
Usp40Q8BWR4 Trbv16-201ENSMUST00000103274 398 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Usp40Q8BWR4 Igkv4-57-201ENSMUST00000103357 352 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Usp40Q8BWR4 Gm12982-201ENSMUST00000117408 190 ntBASIC4.58□□□□□ -1.68
Usp40Q8BWR4 Gm12261-201ENSMUST00000117499 645 ntBASIC4.58□□□□□ -1.68
Usp40Q8BWR4 Gm11598-201ENSMUST00000119257 357 ntBASIC4.58□□□□□ -1.68
Usp40Q8BWR4 Gm23791-201ENSMUST00000122553 293 ntBASIC4.58□□□□□ -1.68
Usp40Q8BWR4 Gm24627-201ENSMUST00000122764 138 ntBASIC4.58□□□□□ -1.68
Usp40Q8BWR4 Gm27723-201ENSMUST00000157398 63 ntBASIC4.58□□□□□ -1.68
Usp40Q8BWR4 Gm24690-201ENSMUST00000157759 97 ntBASIC4.58□□□□□ -1.68
Usp40Q8BWR4 Gm25654-201ENSMUST00000158467 88 ntBASIC4.58□□□□□ -1.68
Usp40Q8BWR4 Gm17153-201ENSMUST00000171314 490 ntBASIC4.58□□□□□ -1.68
Usp40Q8BWR4 Gm27783-201ENSMUST00000183534 105 ntBASIC4.58□□□□□ -1.68
Usp40Q8BWR4 Gm8197-201ENSMUST00000192906 363 ntTSL 5 BASIC4.58□□□□□ -1.68
Usp40Q8BWR4 Gm44600-201ENSMUST00000208540 111 ntBASIC4.58□□□□□ -1.68
Usp40Q8BWR4 AC099578.1-201ENSMUST00000220147 435 ntBASIC4.58□□□□□ -1.68
Usp40Q8BWR4 AC159709.1-201ENSMUST00000220445 349 ntBASIC4.58□□□□□ -1.68
Usp40Q8BWR4 AC101945.1-201ENSMUST00000226734 466 ntBASIC4.58□□□□□ -1.68
Usp40Q8BWR4 AC165138.1-201ENSMUST00000226984 270 ntBASIC4.58□□□□□ -1.68
Usp40Q8BWR4 Pip-201ENSMUST00000075351 588 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Usp40Q8BWR4 Gm24148-201ENSMUST00000082762 80 ntBASIC4.58□□□□□ -1.68
Usp40Q8BWR4 Gm37494-202ENSMUST00000188038 16021 ntTSL 5 BASIC4.58□□□□□ -1.68
Usp40Q8BWR4 Vmn2r46-201ENSMUST00000171523 2430 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Usp40Q8BWR4 Gm8300-201ENSMUST00000110152 1873 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Usp40Q8BWR4 Olfr1016-202ENSMUST00000216425 2698 ntAPPRIS P1 TSL 3 BASIC4.58□□□□□ -1.68
Usp40Q8BWR4 Klra2-201ENSMUST00000032306 1799 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
Usp40Q8BWR4 Nufip2-201ENSMUST00000100802 5158 ntAPPRIS P2 TSL 1 (best) BASIC4.58□□□□□ -1.68
Usp40Q8BWR4 Vmn2r82-201ENSMUST00000170596 3045 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Usp40Q8BWR4 B020011L13Rik-201ENSMUST00000188801 2879 ntAPPRIS P1 TSL 3 BASIC4.57□□□□□ -1.68
Usp40Q8BWR4 Zfp616-201ENSMUST00000074813 5014 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Usp40Q8BWR4 Nlrp9a-202ENSMUST00000108387 3336 ntAPPRIS P4 TSL 1 (best) BASIC4.57□□□□□ -1.68
Usp40Q8BWR4 Olfr665-204ENSMUST00000216971 3248 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Usp40Q8BWR4 Gm24120-201ENSMUST00000103978 129 ntBASIC4.57□□□□□ -1.68
Usp40Q8BWR4 Gm24482-201ENSMUST00000117005 93 ntBASIC4.57□□□□□ -1.68
Usp40Q8BWR4 Gm13239-201ENSMUST00000119920 637 ntBASIC4.57□□□□□ -1.68
Usp40Q8BWR4 Gm11849-201ENSMUST00000121293 261 ntBASIC4.57□□□□□ -1.68
Usp40Q8BWR4 Gm24629-201ENSMUST00000122762 89 ntBASIC4.57□□□□□ -1.68
Usp40Q8BWR4 Gm22145-201ENSMUST00000157396 148 ntBASIC4.57□□□□□ -1.68
Usp40Q8BWR4 Gm4479-201ENSMUST00000178807 171 ntBASIC4.57□□□□□ -1.68
Usp40Q8BWR4 Ighv1-28-201ENSMUST00000192987 351 ntBASIC4.57□□□□□ -1.68
Usp40Q8BWR4 Gm29884-201ENSMUST00000218403 453 ntBASIC4.57□□□□□ -1.68
Usp40Q8BWR4 Tfpi-204ENSMUST00000111714 3614 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Usp40Q8BWR4 Gm38069-201ENSMUST00000195360 2144 ntBASIC4.57□□□□□ -1.68
Usp40Q8BWR4 AC154481.2-201ENSMUST00000222526 3175 ntBASIC4.57□□□□□ -1.68
Usp40Q8BWR4 Gm37298-201ENSMUST00000193770 3868 ntBASIC4.56□□□□□ -1.68
Usp40Q8BWR4 Olfr652-202ENSMUST00000215410 4672 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Usp40Q8BWR4 Vmn1r174-202ENSMUST00000228331 9058 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
Usp40Q8BWR4 Gm23142-201ENSMUST00000101848 105 ntBASIC4.56□□□□□ -1.68
Usp40Q8BWR4 Gm26240-201ENSMUST00000101893 105 ntBASIC4.56□□□□□ -1.68
Usp40Q8BWR4 Gm25308-201ENSMUST00000104171 158 ntBASIC4.56□□□□□ -1.68
Usp40Q8BWR4 Rpl31-ps6-201ENSMUST00000119959 378 ntBASIC4.56□□□□□ -1.68
Usp40Q8BWR4 Gm22345-201ENSMUST00000122644 107 ntBASIC4.56□□□□□ -1.68
Usp40Q8BWR4 Vmn1r-ps40-201ENSMUST00000172862 343 ntBASIC4.56□□□□□ -1.68
Usp40Q8BWR4 Gm21746-201ENSMUST00000177612 543 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
Usp40Q8BWR4 Mir6418-201ENSMUST00000185075 115 ntBASIC4.56□□□□□ -1.68
Usp40Q8BWR4 Gm43749-201ENSMUST00000199345 352 ntBASIC4.56□□□□□ -1.68
Usp40Q8BWR4 Gm45513-201ENSMUST00000210228 376 ntBASIC4.56□□□□□ -1.68
Usp40Q8BWR4 AC155923.1-201ENSMUST00000215676 356 ntBASIC4.56□□□□□ -1.68
Usp40Q8BWR4 AC158798.1-201ENSMUST00000219714 711 ntTSL 5 BASIC4.56□□□□□ -1.68
Usp40Q8BWR4 AC166369.3-201ENSMUST00000227286 409 ntBASIC4.56□□□□□ -1.68
Usp40Q8BWR4 AC113031.4-201ENSMUST00000228381 514 ntBASIC4.56□□□□□ -1.68
Usp40Q8BWR4 Gm24045-201ENSMUST00000083113 98 ntBASIC4.56□□□□□ -1.68
Usp40Q8BWR4 Gm23677-201ENSMUST00000083156 104 ntBASIC4.56□□□□□ -1.68
Usp40Q8BWR4 Gm3259-201ENSMUST00000101015 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.56□□□□□ -1.68
Usp40Q8BWR4 Olfr111-202ENSMUST00000214259 2620 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 8 ms