Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 Gm23288-201ENSMUST00000179213 121 ntBASIC2.56□□□□□ -2
Nup54Q8BTS4 Gm22633-201ENSMUST00000179834 107 ntBASIC2.56□□□□□ -2
Nup54Q8BTS4 Gm28404-201ENSMUST00000190242 453 ntBASIC2.56□□□□□ -2
Nup54Q8BTS4 Gm37754-201ENSMUST00000194406 452 ntTSL 5 BASIC2.56□□□□□ -2
Nup54Q8BTS4 Gm7871-201ENSMUST00000195346 618 ntBASIC2.56□□□□□ -2
Nup54Q8BTS4 Gm37029-201ENSMUST00000195773 239 ntBASIC2.56□□□□□ -2
Nup54Q8BTS4 Gm45459-201ENSMUST00000209882 442 ntTSL 5 BASIC2.56□□□□□ -2
Nup54Q8BTS4 Olfr962-ps1-201ENSMUST00000217332 442 ntBASIC2.56□□□□□ -2
Nup54Q8BTS4 AC138401.1-201ENSMUST00000221533 116 ntBASIC2.56□□□□□ -2
Nup54Q8BTS4 CT030159.4-201ENSMUST00000221966 395 ntBASIC2.56□□□□□ -2
Nup54Q8BTS4 Olfr305-201ENSMUST00000069236 960 ntAPPRIS P1 BASIC2.56□□□□□ -2
Nup54Q8BTS4 Defb39-201ENSMUST00000075504 252 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Nup54Q8BTS4 Gm22572-201ENSMUST00000082985 105 ntBASIC2.56□□□□□ -2
Nup54Q8BTS4 Gm26494-201ENSMUST00000083154 143 ntBASIC2.56□□□□□ -2
Nup54Q8BTS4 Gm24493-201ENSMUST00000083805 143 ntBASIC2.56□□□□□ -2
Nup54Q8BTS4 Olfr1086-201ENSMUST00000099878 933 ntAPPRIS P1 BASIC2.56□□□□□ -2
Nup54Q8BTS4 Vmn2r65-201ENSMUST00000044583 2538 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Nup54Q8BTS4 Uty-201ENSMUST00000069309 5208 ntAPPRIS P3 TSL 1 (best) BASIC2.55□□□□□ -2
Nup54Q8BTS4 Gm9732-201ENSMUST00000111874 492 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
Nup54Q8BTS4 Gm12878-201ENSMUST00000118744 332 ntBASIC2.55□□□□□ -2
Nup54Q8BTS4 Gm12617-201ENSMUST00000121268 381 ntBASIC2.55□□□□□ -2
Nup54Q8BTS4 Gm24212-201ENSMUST00000158258 132 ntBASIC2.55□□□□□ -2
Nup54Q8BTS4 Gm17065-201ENSMUST00000165245 239 ntBASIC2.55□□□□□ -2
Nup54Q8BTS4 BC028528-205ENSMUST00000171519 447 ntAPPRIS P3 TSL 1 (best) BASIC2.55□□□□□ -2
Nup54Q8BTS4 Vmn2r71-201ENSMUST00000172338 2568 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Nup54Q8BTS4 Gm24757-201ENSMUST00000176987 371 ntBASIC2.55□□□□□ -2
Nup54Q8BTS4 Gm23144-201ENSMUST00000180226 107 ntBASIC2.55□□□□□ -2
Nup54Q8BTS4 Gm23190-201ENSMUST00000180307 64 ntBASIC2.55□□□□□ -2
Nup54Q8BTS4 Mir6363-201ENSMUST00000184880 114 ntBASIC2.55□□□□□ -2
Nup54Q8BTS4 Gm28900-201ENSMUST00000185232 156 ntBASIC2.55□□□□□ -2
Nup54Q8BTS4 Rpl23a-ps9-201ENSMUST00000188369 463 ntBASIC2.55□□□□□ -2
Nup54Q8BTS4 Gm28647-201ENSMUST00000188416 197 ntBASIC2.55□□□□□ -2
Nup54Q8BTS4 Rpl23a-ps11-201ENSMUST00000191583 463 ntBASIC2.55□□□□□ -2
Nup54Q8BTS4 Gm37771-201ENSMUST00000193121 265 ntBASIC2.55□□□□□ -2
Nup54Q8BTS4 Gm37869-201ENSMUST00000193385 595 ntBASIC2.55□□□□□ -2
Nup54Q8BTS4 Gm44011-201ENSMUST00000203336 394 ntBASIC2.55□□□□□ -2
Nup54Q8BTS4 Gm44903-201ENSMUST00000206840 130 ntBASIC2.55□□□□□ -2
Nup54Q8BTS4 AL450317.1-201ENSMUST00000213941 291 ntBASIC2.55□□□□□ -2
Nup54Q8BTS4 Olfr58-202ENSMUST00000215112 2454 ntAPPRIS P1 TSL 2 BASIC2.55□□□□□ -2
Nup54Q8BTS4 AC154506.1-201ENSMUST00000225178 621 ntBASIC2.55□□□□□ -2
Nup54Q8BTS4 AC125350.4-201ENSMUST00000225895 273 ntBASIC2.55□□□□□ -2
Nup54Q8BTS4 CT030662.1-201ENSMUST00000227380 232 ntBASIC2.55□□□□□ -2
Nup54Q8BTS4 Gm6030-201ENSMUST00000078768 402 ntBASIC2.55□□□□□ -2
Nup54Q8BTS4 Gm26228-201ENSMUST00000082512 107 ntBASIC2.55□□□□□ -2
Nup54Q8BTS4 Gm25080-201ENSMUST00000082526 107 ntBASIC2.55□□□□□ -2
Nup54Q8BTS4 Gm23847-201ENSMUST00000083829 110 ntBASIC2.55□□□□□ -2
Nup54Q8BTS4 Gm25518-201ENSMUST00000083864 107 ntBASIC2.55□□□□□ -2
Nup54Q8BTS4 Olfr103-202ENSMUST00000173472 3079 ntAPPRIS P1 TSL 3 BASIC2.55□□□□□ -2
Nup54Q8BTS4 A330044P14Rik-201ENSMUST00000176108 2706 ntTSL 1 (best) BASIC2.55□□□□□ -2
Nup54Q8BTS4 Gm38706-201ENSMUST00000182397 2617 ntBASIC2.55□□□□□ -2
Nup54Q8BTS4 Gm44821-201ENSMUST00000208212 2002 ntBASIC2.54□□□□□ -2
Nup54Q8BTS4 Gm14325-203ENSMUST00000188914 1494 ntTSL 5 BASIC2.54□□□□□ -2
Nup54Q8BTS4 Gm25526-201ENSMUST00000104332 132 ntBASIC2.54□□□□□ -2
Nup54Q8BTS4 Gm23803-201ENSMUST00000104610 132 ntBASIC2.54□□□□□ -2
Nup54Q8BTS4 Gm22486-201ENSMUST00000116815 137 ntBASIC2.54□□□□□ -2
Nup54Q8BTS4 Mir1195-201ENSMUST00000116818 98 ntBASIC2.54□□□□□ -2
Nup54Q8BTS4 Gm15175-201ENSMUST00000117629 132 ntBASIC2.54□□□□□ -2
Nup54Q8BTS4 Gm14293-201ENSMUST00000118528 577 ntBASIC2.54□□□□□ -2
Nup54Q8BTS4 Gm15167-201ENSMUST00000121997 187 ntBASIC2.54□□□□□ -2
Nup54Q8BTS4 1700071G01Rik-201ENSMUST00000146728 367 ntTSL 1 (best) BASIC2.54□□□□□ -2
Nup54Q8BTS4 Gm13794-201ENSMUST00000148637 468 ntTSL 3 BASIC2.54□□□□□ -2
Nup54Q8BTS4 Gm22793-201ENSMUST00000157227 330 ntBASIC2.54□□□□□ -2
Nup54Q8BTS4 Gm22534-201ENSMUST00000158173 104 ntBASIC2.54□□□□□ -2
Nup54Q8BTS4 Vmn2r-ps19-201ENSMUST00000179720 269 ntBASIC2.54□□□□□ -2
Nup54Q8BTS4 Gm24518-201ENSMUST00000180275 94 ntBASIC2.54□□□□□ -2
Nup54Q8BTS4 Gm27957-201ENSMUST00000184054 127 ntBASIC2.54□□□□□ -2
Nup54Q8BTS4 Gm27582-201ENSMUST00000184084 126 ntBASIC2.54□□□□□ -2
Nup54Q8BTS4 Gm27608-201ENSMUST00000184822 162 ntBASIC2.54□□□□□ -2
Nup54Q8BTS4 Gm17946-201ENSMUST00000186856 538 ntBASIC2.54□□□□□ -2
Nup54Q8BTS4 Gm44410-201ENSMUST00000203151 341 ntTSL 3 BASIC2.54□□□□□ -2
Nup54Q8BTS4 Gm44161-201ENSMUST00000203532 253 ntBASIC2.54□□□□□ -2
Nup54Q8BTS4 Gm44060-201ENSMUST00000204440 410 ntBASIC2.54□□□□□ -2
Nup54Q8BTS4 Gm35386-201ENSMUST00000204603 629 ntTSL 3 BASIC2.54□□□□□ -2
Nup54Q8BTS4 Gm19252-201ENSMUST00000204705 305 ntBASIC2.54□□□□□ -2
Nup54Q8BTS4 Gm32531-201ENSMUST00000209324 373 ntTSL 3 BASIC2.54□□□□□ -2
Nup54Q8BTS4 Olfr848-ps1-201ENSMUST00000212241 930 ntBASIC2.54□□□□□ -2
Nup54Q8BTS4 4930567K20Rik-204ENSMUST00000220270 445 ntTSL 1 (best) BASIC2.54□□□□□ -2
Nup54Q8BTS4 2900042G08Rik-201ENSMUST00000221776 650 ntBASIC2.54□□□□□ -2
Nup54Q8BTS4 Cycs-ps3-201ENSMUST00000223240 321 ntBASIC2.54□□□□□ -2
Nup54Q8BTS4 Cysltr1-201ENSMUST00000064892 1059 ntAPPRIS P1 TSL 2 BASIC2.54□□□□□ -2
Nup54Q8BTS4 Olfr951-201ENSMUST00000078531 945 ntAPPRIS P2 BASIC2.54□□□□□ -2
Nup54Q8BTS4 Olfr954-201ENSMUST00000080329 945 ntAPPRIS P2 BASIC2.54□□□□□ -2
Nup54Q8BTS4 Gm24268-201ENSMUST00000082990 110 ntBASIC2.54□□□□□ -2
Nup54Q8BTS4 Gm23249-201ENSMUST00000083369 161 ntBASIC2.54□□□□□ -2
Nup54Q8BTS4 Gm26108-201ENSMUST00000083973 191 ntBASIC2.54□□□□□ -2
Nup54Q8BTS4 Gm44644-202ENSMUST00000208825 3133 ntTSL 2 BASIC2.54□□□□□ -2
Nup54Q8BTS4 Gm381-201ENSMUST00000117443 2037 ntBASIC2.54□□□□□ -2
Nup54Q8BTS4 Vmn1r178-203ENSMUST00000226489 2644 ntBASIC2.54□□□□□ -2
Nup54Q8BTS4 Olfr298-204ENSMUST00000217110 3549 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Nup54Q8BTS4 Gm38071-201ENSMUST00000195792 3378 ntBASIC2.53□□□□□ -2
Nup54Q8BTS4 Trbv21-201ENSMUST00000103278 290 ntAPPRIS P1 BASIC2.53□□□□□ -2
Nup54Q8BTS4 Trbj1-4-201ENSMUST00000103287 51 ntAPPRIS P1 BASIC2.53□□□□□ -2
Nup54Q8BTS4 Gm22674-201ENSMUST00000104413 131 ntBASIC2.53□□□□□ -2
Nup54Q8BTS4 Klra10-201ENSMUST00000112020 823 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Nup54Q8BTS4 Gm24475-201ENSMUST00000157435 143 ntBASIC2.53□□□□□ -2
Nup54Q8BTS4 Gm16311-201ENSMUST00000161939 702 ntTSL 3 BASIC2.53□□□□□ -2
Nup54Q8BTS4 Vmn1r-ps47-201ENSMUST00000176694 907 ntBASIC2.53□□□□□ -2
Nup54Q8BTS4 Igkv1-136-201ENSMUST00000200635 297 ntBASIC2.53□□□□□ -2
Nup54Q8BTS4 Gm44818-201ENSMUST00000206608 358 ntBASIC2.53□□□□□ -2
Nup54Q8BTS4 AL935138.1-201ENSMUST00000215309 196 ntBASIC2.53□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 106.1 ms