Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Ifi203-209ENSMUST00000156895 3605 ntAPPRIS ALT2 TSL 1 (best) BASIC2.49□□□□□ -2.01
Ccdc40Q8BI79 Gm12765-201ENSMUST00000117273 615 ntBASIC2.49□□□□□ -2.01
Ccdc40Q8BI79 Gm15183-201ENSMUST00000118933 348 ntBASIC2.49□□□□□ -2.01
Ccdc40Q8BI79 Gm4468-201ENSMUST00000170206 294 ntBASIC2.49□□□□□ -2.01
Ccdc40Q8BI79 Gm8114-201ENSMUST00000172225 484 ntBASIC2.49□□□□□ -2.01
Ccdc40Q8BI79 Mir7217-201ENSMUST00000200304 62 ntBASIC2.49□□□□□ -2.01
Ccdc40Q8BI79 Gm43232-201ENSMUST00000201346 364 ntBASIC2.49□□□□□ -2.01
Ccdc40Q8BI79 4930402F11Rik-202ENSMUST00000207781 1178 ntTSL 5 BASIC2.49□□□□□ -2.01
Ccdc40Q8BI79 Gm45459-201ENSMUST00000209882 442 ntTSL 5 BASIC2.49□□□□□ -2.01
Ccdc40Q8BI79 Gm29817-201ENSMUST00000210098 172 ntBASIC2.49□□□□□ -2.01
Ccdc40Q8BI79 AL450317.1-201ENSMUST00000213941 291 ntBASIC2.49□□□□□ -2.01
Ccdc40Q8BI79 AC111044.1-201ENSMUST00000220206 555 ntTSL 5 BASIC2.49□□□□□ -2.01
Ccdc40Q8BI79 Olfr937-201ENSMUST00000055567 936 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
Ccdc40Q8BI79 Gm26494-201ENSMUST00000083154 143 ntBASIC2.49□□□□□ -2.01
Ccdc40Q8BI79 Mir193a-201ENSMUST00000083461 66 ntBASIC2.49□□□□□ -2.01
Ccdc40Q8BI79 Gm24493-201ENSMUST00000083805 143 ntBASIC2.49□□□□□ -2.01
Ccdc40Q8BI79 Gm26327-201ENSMUST00000093724 111 ntBASIC2.49□□□□□ -2.01
Ccdc40Q8BI79 Olfr394-202ENSMUST00000214284 5562 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
Ccdc40Q8BI79 Gpr174-207ENSMUST00000178838 4955 ntAPPRIS P1 TSL 2 BASIC2.49□□□□□ -2.01
Ccdc40Q8BI79 Olfr1037-203ENSMUST00000216020 1359 ntAPPRIS P1 TSL 3 BASIC2.49□□□□□ -2.01
Ccdc40Q8BI79 Gm26147-201ENSMUST00000104479 114 ntBASIC2.48□□□□□ -2.01
Ccdc40Q8BI79 Gm14670-201ENSMUST00000117327 337 ntBASIC2.48□□□□□ -2.01
Ccdc40Q8BI79 Gm14821-201ENSMUST00000121975 435 ntBASIC2.48□□□□□ -2.01
Ccdc40Q8BI79 Gm6568-201ENSMUST00000122274 697 ntBASIC2.48□□□□□ -2.01
Ccdc40Q8BI79 Gm25784-201ENSMUST00000122524 81 ntBASIC2.48□□□□□ -2.01
Ccdc40Q8BI79 Gm22038-201ENSMUST00000157277 242 ntBASIC2.48□□□□□ -2.01
Ccdc40Q8BI79 Gm24691-201ENSMUST00000157762 140 ntBASIC2.48□□□□□ -2.01
Ccdc40Q8BI79 Gm23642-201ENSMUST00000157858 258 ntBASIC2.48□□□□□ -2.01
Ccdc40Q8BI79 Gm24846-201ENSMUST00000158033 108 ntBASIC2.48□□□□□ -2.01
Ccdc40Q8BI79 Hmgb3-ps-201ENSMUST00000162465 601 ntBASIC2.48□□□□□ -2.01
Ccdc40Q8BI79 Olfr756-ps1-201ENSMUST00000173450 928 ntBASIC2.48□□□□□ -2.01
Ccdc40Q8BI79 Mir6370-201ENSMUST00000183510 120 ntBASIC2.48□□□□□ -2.01
Ccdc40Q8BI79 Gm38167-201ENSMUST00000195704 1178 ntBASIC2.48□□□□□ -2.01
Ccdc40Q8BI79 Gm23370-202ENSMUST00000197008 129 ntBASIC2.48□□□□□ -2.01
Ccdc40Q8BI79 Gm7039-201ENSMUST00000205138 346 ntBASIC2.48□□□□□ -2.01
Ccdc40Q8BI79 Gm45232-201ENSMUST00000207811 162 ntBASIC2.48□□□□□ -2.01
Ccdc40Q8BI79 AC132384.11-201ENSMUST00000219676 178 ntBASIC2.48□□□□□ -2.01
Ccdc40Q8BI79 CT009550.5-201ENSMUST00000226286 382 ntBASIC2.48□□□□□ -2.01
Ccdc40Q8BI79 Olfr1340-201ENSMUST00000094834 951 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
Ccdc40Q8BI79 Gm42482-201ENSMUST00000198904 1947 ntBASIC2.48□□□□□ -2.01
Ccdc40Q8BI79 Gm14049-201ENSMUST00000121009 636 ntBASIC2.47□□□□□ -2.01
Ccdc40Q8BI79 Gm13862-201ENSMUST00000121220 197 ntBASIC2.47□□□□□ -2.01
Ccdc40Q8BI79 Gm11849-201ENSMUST00000121293 261 ntBASIC2.47□□□□□ -2.01
Ccdc40Q8BI79 Scgb1b26-ps-201ENSMUST00000121845 291 ntBASIC2.47□□□□□ -2.01
Ccdc40Q8BI79 Gm22037-201ENSMUST00000157280 296 ntBASIC2.47□□□□□ -2.01
Ccdc40Q8BI79 Gm24601-201ENSMUST00000157970 143 ntBASIC2.47□□□□□ -2.01
Ccdc40Q8BI79 Gm20660-201ENSMUST00000177515 289 ntBASIC2.47□□□□□ -2.01
Ccdc40Q8BI79 Gm9944-201ENSMUST00000177649 309 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
Ccdc40Q8BI79 Gm24464-201ENSMUST00000179697 107 ntBASIC2.47□□□□□ -2.01
Ccdc40Q8BI79 Sumo1-203ENSMUST00000185265 532 ntTSL 3 BASIC2.47□□□□□ -2.01
Ccdc40Q8BI79 Gm28347-201ENSMUST00000185380 382 ntTSL 2 BASIC2.47□□□□□ -2.01
Ccdc40Q8BI79 Gm28838-201ENSMUST00000186338 315 ntBASIC2.47□□□□□ -2.01
Ccdc40Q8BI79 Gm29635-201ENSMUST00000187221 315 ntBASIC2.47□□□□□ -2.01
Ccdc40Q8BI79 Gm29026-201ENSMUST00000187787 315 ntBASIC2.47□□□□□ -2.01
Ccdc40Q8BI79 Gm28797-201ENSMUST00000188543 315 ntBASIC2.47□□□□□ -2.01
Ccdc40Q8BI79 Gm28855-201ENSMUST00000188680 315 ntBASIC2.47□□□□□ -2.01
Ccdc40Q8BI79 Gm28705-201ENSMUST00000189548 315 ntBASIC2.47□□□□□ -2.01
Ccdc40Q8BI79 Gm28939-201ENSMUST00000190351 315 ntBASIC2.47□□□□□ -2.01
Ccdc40Q8BI79 Gm28223-201ENSMUST00000190469 315 ntBASIC2.47□□□□□ -2.01
Ccdc40Q8BI79 Gm29092-201ENSMUST00000190768 315 ntBASIC2.47□□□□□ -2.01
Ccdc40Q8BI79 Gm17991-201ENSMUST00000208139 297 ntBASIC2.47□□□□□ -2.01
Ccdc40Q8BI79 Gm18703-201ENSMUST00000215318 333 ntBASIC2.47□□□□□ -2.01
Ccdc40Q8BI79 AC141895.1-201ENSMUST00000218141 273 ntBASIC2.47□□□□□ -2.01
Ccdc40Q8BI79 CT025606.1-201ENSMUST00000218273 324 ntBASIC2.47□□□□□ -2.01
Ccdc40Q8BI79 Gm24921-201ENSMUST00000083024 107 ntBASIC2.47□□□□□ -2.01
Ccdc40Q8BI79 Gm25628-201ENSMUST00000084002 105 ntBASIC2.47□□□□□ -2.01
Ccdc40Q8BI79 Gm8300-201ENSMUST00000110152 1873 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
Ccdc40Q8BI79 Olfr659-202ENSMUST00000214986 4842 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
Ccdc40Q8BI79 Skint6-202ENSMUST00000171224 3723 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
Ccdc40Q8BI79 Gm18795-201ENSMUST00000222371 3266 ntTSL 5 BASIC2.46□□□□□ -2.02
Ccdc40Q8BI79 Mir1192-201ENSMUST00000116976 121 ntBASIC2.46□□□□□ -2.02
Ccdc40Q8BI79 Gm13756-201ENSMUST00000117618 222 ntBASIC2.46□□□□□ -2.02
Ccdc40Q8BI79 Gm9043-201ENSMUST00000119677 314 ntBASIC2.46□□□□□ -2.02
Ccdc40Q8BI79 Gm15719-201ENSMUST00000120619 635 ntBASIC2.46□□□□□ -2.02
Ccdc40Q8BI79 Gm12443-201ENSMUST00000122308 323 ntBASIC2.46□□□□□ -2.02
Ccdc40Q8BI79 Gm14100-201ENSMUST00000125575 651 ntTSL 3 BASIC2.46□□□□□ -2.02
Ccdc40Q8BI79 Gm12510-201ENSMUST00000152190 362 ntTSL 5 BASIC2.46□□□□□ -2.02
Ccdc40Q8BI79 Gm23956-201ENSMUST00000157211 119 ntBASIC2.46□□□□□ -2.02
Ccdc40Q8BI79 Gm24198-201ENSMUST00000157812 108 ntBASIC2.46□□□□□ -2.02
Ccdc40Q8BI79 Gm22535-201ENSMUST00000158174 119 ntBASIC2.46□□□□□ -2.02
Ccdc40Q8BI79 4930473D10Rik-201ENSMUST00000161975 487 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
Ccdc40Q8BI79 Gm22584-201ENSMUST00000177935 92 ntBASIC2.46□□□□□ -2.02
Ccdc40Q8BI79 Gm28299-201ENSMUST00000189908 339 ntBASIC2.46□□□□□ -2.02
Ccdc40Q8BI79 Gm37757-201ENSMUST00000193072 210 ntBASIC2.46□□□□□ -2.02
Ccdc40Q8BI79 Gm37771-201ENSMUST00000193121 265 ntBASIC2.46□□□□□ -2.02
Ccdc40Q8BI79 Mir7215-201ENSMUST00000200383 51 ntBASIC2.46□□□□□ -2.02
Ccdc40Q8BI79 AL929265.1-201ENSMUST00000213427 125 ntBASIC2.46□□□□□ -2.02
Ccdc40Q8BI79 AC163289.1-201ENSMUST00000215919 262 ntBASIC2.46□□□□□ -2.02
Ccdc40Q8BI79 Olfr6-204ENSMUST00000219365 951 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
Ccdc40Q8BI79 Gm6109-201ENSMUST00000223297 348 ntBASIC2.46□□□□□ -2.02
Ccdc40Q8BI79 AC135292.1-201ENSMUST00000227665 204 ntBASIC2.46□□□□□ -2.02
Ccdc40Q8BI79 Pdcd10-201ENSMUST00000029424 907 ntTSL 5 BASIC2.46□□□□□ -2.02
Ccdc40Q8BI79 F8-202ENSMUST00000114085 7295 ntAPPRIS ALT2 TSL 1 (best) BASIC2.46□□□□□ -2.02
Ccdc40Q8BI79 Knl1-202ENSMUST00000028802 7800 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
Ccdc40Q8BI79 Gpr174-204ENSMUST00000120971 3588 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
Ccdc40Q8BI79 Olfr1105-202ENSMUST00000215978 3012 ntAPPRIS P1 TSL 3 BASIC2.45□□□□□ -2.02
Ccdc40Q8BI79 Gm44644-202ENSMUST00000208825 3133 ntTSL 2 BASIC2.45□□□□□ -2.02
Ccdc40Q8BI79 Skint5-203ENSMUST00000170105 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.45□□□□□ -2.02
Ccdc40Q8BI79 Vmn1r185-204ENSMUST00000227411 4928 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
Ccdc40Q8BI79 Gm24582-201ENSMUST00000103967 103 ntBASIC2.45□□□□□ -2.02
Retrieved 100 of 76,532 protein–RNA pairs in 82 ms