Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Gm24861-201ENSMUST00000083459 107 ntBASIC3.31□□□□□ -1.88
Ubfd1Q78JW9 Gm24803-201ENSMUST00000083693 107 ntBASIC3.31□□□□□ -1.88
Ubfd1Q78JW9 Gm23103-201ENSMUST00000083725 107 ntBASIC3.31□□□□□ -1.88
Ubfd1Q78JW9 Gm22580-201ENSMUST00000083727 107 ntBASIC3.31□□□□□ -1.88
Ubfd1Q78JW9 Gm24260-201ENSMUST00000083741 107 ntBASIC3.31□□□□□ -1.88
Ubfd1Q78JW9 Gm23732-201ENSMUST00000083751 107 ntBASIC3.31□□□□□ -1.88
Ubfd1Q78JW9 Gm22682-201ENSMUST00000083854 107 ntBASIC3.31□□□□□ -1.88
Ubfd1Q78JW9 Gm25869-201ENSMUST00000083855 107 ntBASIC3.31□□□□□ -1.88
Ubfd1Q78JW9 Gm24693-201ENSMUST00000083885 107 ntBASIC3.31□□□□□ -1.88
Ubfd1Q78JW9 Gm26317-201ENSMUST00000083894 107 ntBASIC3.31□□□□□ -1.88
Ubfd1Q78JW9 Gm22352-201ENSMUST00000083917 107 ntBASIC3.31□□□□□ -1.88
Ubfd1Q78JW9 Gm24448-201ENSMUST00000083979 107 ntBASIC3.31□□□□□ -1.88
Ubfd1Q78JW9 Gm22798-201ENSMUST00000083992 107 ntBASIC3.31□□□□□ -1.88
Ubfd1Q78JW9 Gm26427-201ENSMUST00000093648 107 ntBASIC3.31□□□□□ -1.88
Ubfd1Q78JW9 Gm22886-201ENSMUST00000093714 107 ntBASIC3.31□□□□□ -1.88
Ubfd1Q78JW9 Gm22170-201ENSMUST00000097247 107 ntBASIC3.31□□□□□ -1.88
Ubfd1Q78JW9 Gm45159-201ENSMUST00000208630 25241 ntTSL 5 BASIC3.31□□□□□ -1.88
Ubfd1Q78JW9 Wnk3-205ENSMUST00000184392 5394 ntAPPRIS P4 TSL 1 (best) BASIC3.3□□□□□ -1.88
Ubfd1Q78JW9 Olfr385-202ENSMUST00000215689 1671 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Ubfd1Q78JW9 Trav14d-2-201ENSMUST00000103597 276 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Ubfd1Q78JW9 Trav14n-2-201ENSMUST00000103623 276 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Ubfd1Q78JW9 Traj24-201ENSMUST00000103717 63 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Ubfd1Q78JW9 Gm22021-201ENSMUST00000104353 107 ntBASIC3.3□□□□□ -1.88
Ubfd1Q78JW9 Gm7327-201ENSMUST00000120925 652 ntBASIC3.3□□□□□ -1.88
Ubfd1Q78JW9 Gm12958-201ENSMUST00000141242 674 ntTSL 3 BASIC3.3□□□□□ -1.88
Ubfd1Q78JW9 4930421P07Rik-201ENSMUST00000147322 399 ntBASIC3.3□□□□□ -1.88
Ubfd1Q78JW9 Gm21094-201ENSMUST00000177842 498 ntTSL 5 BASIC3.3□□□□□ -1.88
Ubfd1Q78JW9 Gm26501-201ENSMUST00000178307 107 ntBASIC3.3□□□□□ -1.88
Ubfd1Q78JW9 Gm20837-201ENSMUST00000178446 498 ntTSL 5 BASIC3.3□□□□□ -1.88
Ubfd1Q78JW9 Gm25671-201ENSMUST00000178612 105 ntBASIC3.3□□□□□ -1.88
Ubfd1Q78JW9 Gm21739-201ENSMUST00000178639 498 ntTSL 5 BASIC3.3□□□□□ -1.88
Ubfd1Q78JW9 Gm28891-201ENSMUST00000178751 498 ntTSL 5 BASIC3.3□□□□□ -1.88
Ubfd1Q78JW9 Gm28490-201ENSMUST00000179076 498 ntTSL 5 BASIC3.3□□□□□ -1.88
Ubfd1Q78JW9 Gm23307-201ENSMUST00000179167 105 ntBASIC3.3□□□□□ -1.88
Ubfd1Q78JW9 Gm21861-201ENSMUST00000179480 498 ntTSL 5 BASIC3.3□□□□□ -1.88
Ubfd1Q78JW9 Gm21256-201ENSMUST00000179672 498 ntTSL 5 BASIC3.3□□□□□ -1.88
Ubfd1Q78JW9 Gm25286-201ENSMUST00000179790 105 ntBASIC3.3□□□□□ -1.88
Ubfd1Q78JW9 Gm20838-201ENSMUST00000179884 498 ntTSL 5 BASIC3.3□□□□□ -1.88
Ubfd1Q78JW9 Gm21679-201ENSMUST00000180373 498 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Ubfd1Q78JW9 Gm27013-201ENSMUST00000182441 1024 ntBASIC3.3□□□□□ -1.88
Ubfd1Q78JW9 Trav14-2-202ENSMUST00000184874 276 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Ubfd1Q78JW9 Gm28072-202ENSMUST00000190486 352 ntTSL 5 BASIC3.3□□□□□ -1.88
Ubfd1Q78JW9 Gm7871-201ENSMUST00000195346 618 ntBASIC3.3□□□□□ -1.88
Ubfd1Q78JW9 Gm6510-201ENSMUST00000195916 574 ntBASIC3.3□□□□□ -1.88
Ubfd1Q78JW9 Gm43704-201ENSMUST00000196164 496 ntBASIC3.3□□□□□ -1.88
Ubfd1Q78JW9 Gm45119-201ENSMUST00000207612 199 ntBASIC3.3□□□□□ -1.88
Ubfd1Q78JW9 Olfr505-ps1-201ENSMUST00000207626 976 ntBASIC3.3□□□□□ -1.88
Ubfd1Q78JW9 Gm6012-201ENSMUST00000210821 730 ntBASIC3.3□□□□□ -1.88
Ubfd1Q78JW9 Gm45704-201ENSMUST00000212582 403 ntBASIC3.3□□□□□ -1.88
Ubfd1Q78JW9 AC102312.1-201ENSMUST00000217752 475 ntTSL 3 BASIC3.3□□□□□ -1.88
Ubfd1Q78JW9 Prl-203ENSMUST00000224228 888 ntAPPRIS ALT2 BASIC3.3□□□□□ -1.88
Ubfd1Q78JW9 Gm9765-201ENSMUST00000043170 321 ntBASIC3.3□□□□□ -1.88
Ubfd1Q78JW9 Defb9-201ENSMUST00000057076 310 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Ubfd1Q78JW9 Snora70-201ENSMUST00000083047 137 ntBASIC3.3□□□□□ -1.88
Ubfd1Q78JW9 Gm23345-201ENSMUST00000083817 150 ntBASIC3.3□□□□□ -1.88
Ubfd1Q78JW9 BC100530-201ENSMUST00000096089 619 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Ubfd1Q78JW9 Gm7470-201ENSMUST00000194219 2095 ntBASIC3.3□□□□□ -1.88
Ubfd1Q78JW9 Gm32693-201ENSMUST00000196538 2402 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Ubfd1Q78JW9 Vmn2r50-201ENSMUST00000074943 2586 ntAPPRIS P2 TSL 5 BASIC3.29□□□□□ -1.88
Ubfd1Q78JW9 Mannr-201ENSMUST00000193549 1438 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Ubfd1Q78JW9 Trav6-7-dv9-201ENSMUST00000103638 379 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Ubfd1Q78JW9 Gm23532-201ENSMUST00000104569 112 ntBASIC3.29□□□□□ -1.88
Ubfd1Q78JW9 Gm16242-201ENSMUST00000117741 334 ntBASIC3.29□□□□□ -1.88
Ubfd1Q78JW9 Gm14980-201ENSMUST00000121247 736 ntBASIC3.29□□□□□ -1.88
Ubfd1Q78JW9 Gm14775-201ENSMUST00000122089 310 ntBASIC3.29□□□□□ -1.88
Ubfd1Q78JW9 Gm22085-201ENSMUST00000158344 110 ntBASIC3.29□□□□□ -1.88
Ubfd1Q78JW9 Gm22766-201ENSMUST00000158372 99 ntBASIC3.29□□□□□ -1.88
Ubfd1Q78JW9 Gm7953-201ENSMUST00000168278 469 ntBASIC3.29□□□□□ -1.88
Ubfd1Q78JW9 Mir195b-201ENSMUST00000184814 97 ntBASIC3.29□□□□□ -1.88
Ubfd1Q78JW9 Scgb2b29-ps-201ENSMUST00000187539 331 ntBASIC3.29□□□□□ -1.88
Ubfd1Q78JW9 Gm29012-201ENSMUST00000187882 469 ntTSL 3 BASIC3.29□□□□□ -1.88
Ubfd1Q78JW9 1700027F06Rik-201ENSMUST00000203901 243 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Ubfd1Q78JW9 Gm39147-201ENSMUST00000211376 465 ntBASIC3.29□□□□□ -1.88
Ubfd1Q78JW9 AC124489.2-201ENSMUST00000223930 589 ntBASIC3.29□□□□□ -1.88
Ubfd1Q78JW9 AC124549.2-201ENSMUST00000224243 222 ntBASIC3.29□□□□□ -1.88
Ubfd1Q78JW9 mt-Co3-201ENSMUST00000082409 784 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Ubfd1Q78JW9 Gm25801-201ENSMUST00000082638 106 ntBASIC3.29□□□□□ -1.88
Ubfd1Q78JW9 Gm3239-201ENSMUST00000163525 1751 ntAPPRIS P5 TSL 5 BASIC3.29□□□□□ -1.88
Ubfd1Q78JW9 Olfr681-205ENSMUST00000216247 4729 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Ubfd1Q78JW9 Olfr397-204ENSMUST00000216291 4168 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Ubfd1Q78JW9 AC104897.1-201ENSMUST00000222638 3628 ntBASIC3.29□□□□□ -1.88
Ubfd1Q78JW9 Olfr68-202ENSMUST00000216811 4093 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Ubfd1Q78JW9 Vmn2r42-205ENSMUST00000146278 3086 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
Ubfd1Q78JW9 Vmn2r37-201ENSMUST00000072787 3081 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Ubfd1Q78JW9 Mga-202ENSMUST00000079934 13304 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
Ubfd1Q78JW9 Olfr810-203ENSMUST00000214878 4709 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Ubfd1Q78JW9 Olfr1404-202ENSMUST00000216556 3305 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Ubfd1Q78JW9 AC153365.1-201ENSMUST00000219016 2031 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Ubfd1Q78JW9 Ighv3-5-201ENSMUST00000103479 299 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Ubfd1Q78JW9 Gm22497-201ENSMUST00000104499 131 ntBASIC3.28□□□□□ -1.88
Ubfd1Q78JW9 Gm11009-201ENSMUST00000108961 417 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Ubfd1Q78JW9 Gm12805-201ENSMUST00000117305 1048 ntBASIC3.28□□□□□ -1.88
Ubfd1Q78JW9 Gm14940-201ENSMUST00000119309 495 ntBASIC3.28□□□□□ -1.88
Ubfd1Q78JW9 Gm14593-201ENSMUST00000119948 294 ntBASIC3.28□□□□□ -1.88
Ubfd1Q78JW9 Gm14768-201ENSMUST00000122126 678 ntBASIC3.28□□□□□ -1.88
Ubfd1Q78JW9 Gm14629-201ENSMUST00000122428 144 ntBASIC3.28□□□□□ -1.88
Ubfd1Q78JW9 Gm23886-201ENSMUST00000122684 313 ntBASIC3.28□□□□□ -1.88
Ubfd1Q78JW9 Gm26020-201ENSMUST00000122729 183 ntBASIC3.28□□□□□ -1.88
Ubfd1Q78JW9 Rpl30-206ENSMUST00000142643 505 ntTSL 2 BASIC3.28□□□□□ -1.88
Ubfd1Q78JW9 Gm22560-201ENSMUST00000157332 120 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 163.6 ms