Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Gm26214-201ENSMUST00000158581 107 ntBASIC3.79□□□□□ -1.8
Ddx55Q6ZPL9 Gm8580-201ENSMUST00000160295 464 ntBASIC3.79□□□□□ -1.8
Ddx55Q6ZPL9 Gm8114-201ENSMUST00000172225 484 ntBASIC3.79□□□□□ -1.8
Ddx55Q6ZPL9 Gm18520-201ENSMUST00000174783 658 ntBASIC3.79□□□□□ -1.8
Ddx55Q6ZPL9 Mir6335-201ENSMUST00000184081 98 ntBASIC3.79□□□□□ -1.8
Ddx55Q6ZPL9 Rpl23a-ps7-201ENSMUST00000185437 460 ntBASIC3.79□□□□□ -1.8
Ddx55Q6ZPL9 Gm29574-201ENSMUST00000186226 696 ntBASIC3.79□□□□□ -1.8
Ddx55Q6ZPL9 Gm28058-201ENSMUST00000186421 264 ntBASIC3.79□□□□□ -1.8
Ddx55Q6ZPL9 Gm28828-201ENSMUST00000186601 696 ntBASIC3.79□□□□□ -1.8
Ddx55Q6ZPL9 Gm28159-201ENSMUST00000190296 696 ntBASIC3.79□□□□□ -1.8
Ddx55Q6ZPL9 Gm38356-201ENSMUST00000194313 408 ntBASIC3.79□□□□□ -1.8
Ddx55Q6ZPL9 Gm42647-201ENSMUST00000195939 459 ntBASIC3.79□□□□□ -1.8
Ddx55Q6ZPL9 Gm33654-201ENSMUST00000221704 215 ntBASIC3.79□□□□□ -1.8
Ddx55Q6ZPL9 Gm21937-201ENSMUST00000222825 218 ntBASIC3.79□□□□□ -1.8
Ddx55Q6ZPL9 CT030182.3-201ENSMUST00000225986 582 ntBASIC3.79□□□□□ -1.8
Ddx55Q6ZPL9 Hamp-201ENSMUST00000062620 410 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Ddx55Q6ZPL9 Gm22979-201ENSMUST00000082609 159 ntBASIC3.79□□□□□ -1.8
Ddx55Q6ZPL9 Gm25801-201ENSMUST00000082638 106 ntBASIC3.79□□□□□ -1.8
Ddx55Q6ZPL9 n-R5s220-201ENSMUST00000082926 120 ntBASIC3.79□□□□□ -1.8
Ddx55Q6ZPL9 Mir10a-201ENSMUST00000083585 110 ntBASIC3.79□□□□□ -1.8
Ddx55Q6ZPL9 Smcp-201ENSMUST00000098888 861 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Ddx55Q6ZPL9 Olfr1313-202ENSMUST00000213577 2588 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Ddx55Q6ZPL9 Olfr469-202ENSMUST00000213252 3164 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Ddx55Q6ZPL9 Macf1-206ENSMUST00000106224 23402 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
Ddx55Q6ZPL9 Gm9696-201ENSMUST00000094227 3050 ntTSL 2 BASIC3.79□□□□□ -1.8
Ddx55Q6ZPL9 Csn1s2b-202ENSMUST00000101057 1668 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Ddx55Q6ZPL9 Vmn1r49-203ENSMUST00000226368 6276 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Ddx55Q6ZPL9 D3Ertd254e-201ENSMUST00000165956 6503 ntTSL 3 BASIC3.78□□□□□ -1.8
Ddx55Q6ZPL9 Gm45848-201ENSMUST00000212932 1871 ntTSL 5 BASIC3.78□□□□□ -1.8
Ddx55Q6ZPL9 Olfr358-202ENSMUST00000216437 4962 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Ddx55Q6ZPL9 Gm22939-201ENSMUST00000103958 131 ntBASIC3.78□□□□□ -1.8
Ddx55Q6ZPL9 Gm13343-201ENSMUST00000116474 105 ntBASIC3.78□□□□□ -1.8
Ddx55Q6ZPL9 Gm13504-201ENSMUST00000117490 316 ntBASIC3.78□□□□□ -1.8
Ddx55Q6ZPL9 Gm13167-201ENSMUST00000118554 578 ntBASIC3.78□□□□□ -1.8
Ddx55Q6ZPL9 Gm12235-201ENSMUST00000118596 170 ntBASIC3.78□□□□□ -1.8
Ddx55Q6ZPL9 Gm26501-201ENSMUST00000178307 107 ntBASIC3.78□□□□□ -1.8
Ddx55Q6ZPL9 Ranbp2-ps6-201ENSMUST00000183722 381 ntBASIC3.78□□□□□ -1.8
Ddx55Q6ZPL9 Mir7014-201ENSMUST00000183853 63 ntBASIC3.78□□□□□ -1.8
Ddx55Q6ZPL9 Gm27893-201ENSMUST00000184408 194 ntBASIC3.78□□□□□ -1.8
Ddx55Q6ZPL9 Mir195b-201ENSMUST00000184814 97 ntBASIC3.78□□□□□ -1.8
Ddx55Q6ZPL9 Mir6375-201ENSMUST00000197176 95 ntBASIC3.78□□□□□ -1.8
Ddx55Q6ZPL9 B230207O21Rik-201ENSMUST00000198634 321 ntBASIC3.78□□□□□ -1.8
Ddx55Q6ZPL9 Obox4-ps25-201ENSMUST00000199090 210 ntBASIC3.78□□□□□ -1.8
Ddx55Q6ZPL9 Gm45738-201ENSMUST00000203645 233 ntTSL 5 BASIC3.78□□□□□ -1.8
Ddx55Q6ZPL9 Olfr711-202ENSMUST00000207200 2966 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
Ddx55Q6ZPL9 Olfr1285-201ENSMUST00000208523 903 ntBASIC3.78□□□□□ -1.8
Ddx55Q6ZPL9 Gm30534-201ENSMUST00000217928 207 ntBASIC3.78□□□□□ -1.8
Ddx55Q6ZPL9 AC124746.2-201ENSMUST00000226594 427 ntBASIC3.78□□□□□ -1.8
Ddx55Q6ZPL9 AC126440.1-201ENSMUST00000227098 349 ntBASIC3.78□□□□□ -1.8
Ddx55Q6ZPL9 AC166369.3-201ENSMUST00000227286 409 ntBASIC3.78□□□□□ -1.8
Ddx55Q6ZPL9 AC130477.2-201ENSMUST00000228158 274 ntBASIC3.78□□□□□ -1.8
Ddx55Q6ZPL9 CT485608.1-201ENSMUST00000228759 389 ntBASIC3.78□□□□□ -1.8
Ddx55Q6ZPL9 Gm23721-201ENSMUST00000083005 107 ntBASIC3.78□□□□□ -1.8
Ddx55Q6ZPL9 Vmn1r86-201ENSMUST00000094828 951 ntAPPRIS P2 BASIC3.78□□□□□ -1.8
Ddx55Q6ZPL9 Gm42659-201ENSMUST00000196955 1754 ntBASIC3.78□□□□□ -1.8
Ddx55Q6ZPL9 Vmn2r90-201ENSMUST00000169805 2592 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Ddx55Q6ZPL9 Gm45540-201ENSMUST00000209271 3606 ntBASIC3.78□□□□□ -1.8
Ddx55Q6ZPL9 Gm8300-201ENSMUST00000110152 1873 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
Ddx55Q6ZPL9 Olfr138-203ENSMUST00000173841 1865 ntAPPRIS P1 TSL 2 BASIC3.77□□□□□ -1.81
Ddx55Q6ZPL9 Gm24596-201ENSMUST00000122504 107 ntBASIC3.77□□□□□ -1.81
Ddx55Q6ZPL9 Gm24839-201ENSMUST00000122602 107 ntBASIC3.77□□□□□ -1.81
Ddx55Q6ZPL9 Gm14100-201ENSMUST00000125575 651 ntTSL 3 BASIC3.77□□□□□ -1.81
Ddx55Q6ZPL9 Gm16358-201ENSMUST00000146046 210 ntBASIC3.77□□□□□ -1.81
Ddx55Q6ZPL9 Gm23137-201ENSMUST00000157559 107 ntBASIC3.77□□□□□ -1.81
Ddx55Q6ZPL9 Gm24584-201ENSMUST00000157972 107 ntBASIC3.77□□□□□ -1.81
Ddx55Q6ZPL9 Gm26468-201ENSMUST00000158644 106 ntBASIC3.77□□□□□ -1.81
Ddx55Q6ZPL9 Mir5624-201ENSMUST00000176635 61 ntBASIC3.77□□□□□ -1.81
Ddx55Q6ZPL9 Gm25211-201ENSMUST00000177553 107 ntBASIC3.77□□□□□ -1.81
Ddx55Q6ZPL9 Gm24540-201ENSMUST00000177627 107 ntBASIC3.77□□□□□ -1.81
Ddx55Q6ZPL9 Gm25256-201ENSMUST00000177746 107 ntBASIC3.77□□□□□ -1.81
Ddx55Q6ZPL9 Gm22822-201ENSMUST00000177941 107 ntBASIC3.77□□□□□ -1.81
Ddx55Q6ZPL9 Gm17469-201ENSMUST00000177942 498 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
Ddx55Q6ZPL9 Gm17693-201ENSMUST00000178004 498 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
Ddx55Q6ZPL9 Rnu6-201ENSMUST00000178023 107 ntBASIC3.77□□□□□ -1.81
Ddx55Q6ZPL9 Gm23151-201ENSMUST00000178061 107 ntBASIC3.77□□□□□ -1.81
Ddx55Q6ZPL9 Gm17361-201ENSMUST00000178121 498 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
Ddx55Q6ZPL9 Gm25245-201ENSMUST00000178139 107 ntBASIC3.77□□□□□ -1.81
Ddx55Q6ZPL9 Gm17522-201ENSMUST00000178144 498 ntBASIC3.77□□□□□ -1.81
Ddx55Q6ZPL9 Gm24753-201ENSMUST00000178183 107 ntBASIC3.77□□□□□ -1.81
Ddx55Q6ZPL9 Gm25829-201ENSMUST00000178275 107 ntBASIC3.77□□□□□ -1.81
Ddx55Q6ZPL9 Gm22092-201ENSMUST00000178290 107 ntBASIC3.77□□□□□ -1.81
Ddx55Q6ZPL9 Gm21616-201ENSMUST00000178416 498 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
Ddx55Q6ZPL9 Gm24486-201ENSMUST00000178420 107 ntBASIC3.77□□□□□ -1.81
Ddx55Q6ZPL9 Gm17584-201ENSMUST00000178471 498 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
Ddx55Q6ZPL9 Gm23217-201ENSMUST00000178482 107 ntBASIC3.77□□□□□ -1.81
Ddx55Q6ZPL9 Gm26245-201ENSMUST00000178491 107 ntBASIC3.77□□□□□ -1.81
Ddx55Q6ZPL9 Gm23610-201ENSMUST00000178659 107 ntBASIC3.77□□□□□ -1.81
Ddx55Q6ZPL9 Gm23092-201ENSMUST00000178688 107 ntBASIC3.77□□□□□ -1.81
Ddx55Q6ZPL9 Gm25709-201ENSMUST00000178844 107 ntBASIC3.77□□□□□ -1.81
Ddx55Q6ZPL9 Gm25547-201ENSMUST00000178877 107 ntBASIC3.77□□□□□ -1.81
Ddx55Q6ZPL9 Gm17267-201ENSMUST00000178952 499 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
Ddx55Q6ZPL9 Gm25312-201ENSMUST00000178972 107 ntBASIC3.77□□□□□ -1.81
Ddx55Q6ZPL9 Gm24722-201ENSMUST00000179017 107 ntBASIC3.77□□□□□ -1.81
Ddx55Q6ZPL9 Gm22969-201ENSMUST00000179018 107 ntBASIC3.77□□□□□ -1.81
Ddx55Q6ZPL9 Gm25101-201ENSMUST00000179057 107 ntBASIC3.77□□□□□ -1.81
Ddx55Q6ZPL9 Gm26378-201ENSMUST00000179093 107 ntBASIC3.77□□□□□ -1.81
Ddx55Q6ZPL9 Gm24873-201ENSMUST00000179101 107 ntBASIC3.77□□□□□ -1.81
Ddx55Q6ZPL9 Gm23934-201ENSMUST00000179111 107 ntBASIC3.77□□□□□ -1.81
Ddx55Q6ZPL9 Gm22623-201ENSMUST00000179244 107 ntBASIC3.77□□□□□ -1.81
Ddx55Q6ZPL9 Gm25737-201ENSMUST00000179274 107 ntBASIC3.77□□□□□ -1.81
Retrieved 100 of 76,532 protein–RNA pairs in 85.9 ms