Protein–RNA interactions for Protein: Q6PGB8

Smarca1, Probable global transcription activator SNF2L1, mousemouse

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca1Q6PGB8 Gm22131-201ENSMUST00000178415 94 ntBASIC3.3□□□□□ -1.88
Smarca1Q6PGB8 Gm23186-201ENSMUST00000180078 107 ntBASIC3.3□□□□□ -1.88
Smarca1Q6PGB8 Gm37428-201ENSMUST00000193886 137 ntBASIC3.3□□□□□ -1.88
Smarca1Q6PGB8 Gm43355-201ENSMUST00000196541 346 ntBASIC3.3□□□□□ -1.88
Smarca1Q6PGB8 Gm42825-201ENSMUST00000198883 723 ntTSL 2 BASIC3.3□□□□□ -1.88
Smarca1Q6PGB8 Mir3073b-201ENSMUST00000199383 60 ntBASIC3.3□□□□□ -1.88
Smarca1Q6PGB8 Gm43367-201ENSMUST00000199986 625 ntBASIC3.3□□□□□ -1.88
Smarca1Q6PGB8 Gm23042-201ENSMUST00000083866 101 ntBASIC3.3□□□□□ -1.88
Smarca1Q6PGB8 A330044P14Rik-201ENSMUST00000176108 2706 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Smarca1Q6PGB8 AC122850.1-201ENSMUST00000220380 5690 ntBASIC3.3□□□□□ -1.88
Smarca1Q6PGB8 Naaladl2-202ENSMUST00000203414 9330 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Smarca1Q6PGB8 Vmn1r80-205ENSMUST00000227755 10455 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Smarca1Q6PGB8 Zfp970-202ENSMUST00000108952 1569 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
Smarca1Q6PGB8 Gm36944-201ENSMUST00000192257 2759 ntBASIC3.29□□□□□ -1.88
Smarca1Q6PGB8 Vmn1r219-204ENSMUST00000228113 5639 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Smarca1Q6PGB8 Vmn1r121-201ENSMUST00000105197 945 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Smarca1Q6PGB8 Gm14823-201ENSMUST00000117698 238 ntBASIC3.29□□□□□ -1.88
Smarca1Q6PGB8 Gm13876-201ENSMUST00000118451 261 ntBASIC3.29□□□□□ -1.88
Smarca1Q6PGB8 Gm14852-201ENSMUST00000120065 647 ntBASIC3.29□□□□□ -1.88
Smarca1Q6PGB8 Gm3669-202ENSMUST00000127852 397 ntTSL 3 BASIC3.29□□□□□ -1.88
Smarca1Q6PGB8 Gm2101-201ENSMUST00000128191 397 ntTSL 3 BASIC3.29□□□□□ -1.88
Smarca1Q6PGB8 Pfdn4-205ENSMUST00000136839 452 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Smarca1Q6PGB8 Gm2165-205ENSMUST00000155337 397 ntTSL 3 BASIC3.29□□□□□ -1.88
Smarca1Q6PGB8 Gm17224-201ENSMUST00000171429 500 ntTSL 3 BASIC3.29□□□□□ -1.88
Smarca1Q6PGB8 Mir5123-201ENSMUST00000177794 83 ntBASIC3.29□□□□□ -1.88
Smarca1Q6PGB8 Gm26585-201ENSMUST00000180890 630 ntBASIC3.29□□□□□ -1.88
Smarca1Q6PGB8 Mir6402-201ENSMUST00000183406 80 ntBASIC3.29□□□□□ -1.88
Smarca1Q6PGB8 Mir7014-201ENSMUST00000183853 63 ntBASIC3.29□□□□□ -1.88
Smarca1Q6PGB8 Gm28494-201ENSMUST00000187687 562 ntTSL 5 BASIC3.29□□□□□ -1.88
Smarca1Q6PGB8 Gm29184-201ENSMUST00000190038 334 ntBASIC3.29□□□□□ -1.88
Smarca1Q6PGB8 Gm1833-201ENSMUST00000191608 682 ntBASIC3.29□□□□□ -1.88
Smarca1Q6PGB8 Gm18341-201ENSMUST00000197538 622 ntBASIC3.29□□□□□ -1.88
Smarca1Q6PGB8 Gtpbp4-ps6-201ENSMUST00000198160 292 ntBASIC3.29□□□□□ -1.88
Smarca1Q6PGB8 B230207O21Rik-201ENSMUST00000198634 321 ntBASIC3.29□□□□□ -1.88
Smarca1Q6PGB8 Gm44399-201ENSMUST00000205043 226 ntBASIC3.29□□□□□ -1.88
Smarca1Q6PGB8 Gm30534-201ENSMUST00000217928 207 ntBASIC3.29□□□□□ -1.88
Smarca1Q6PGB8 AC147101.1-201ENSMUST00000217964 312 ntBASIC3.29□□□□□ -1.88
Smarca1Q6PGB8 Gm29809-201ENSMUST00000218423 493 ntBASIC3.29□□□□□ -1.88
Smarca1Q6PGB8 AC166830.1-201ENSMUST00000224201 533 ntBASIC3.29□□□□□ -1.88
Smarca1Q6PGB8 Olfr821-201ENSMUST00000054364 933 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Smarca1Q6PGB8 Olfr575-201ENSMUST00000084812 957 ntBASIC3.29□□□□□ -1.88
Smarca1Q6PGB8 Olfr898-203ENSMUST00000217063 4169 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
Smarca1Q6PGB8 Olfr124-203ENSMUST00000216478 4416 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Smarca1Q6PGB8 Olfr896-ps1-203ENSMUST00000216276 2921 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Smarca1Q6PGB8 Cp-202ENSMUST00000091309 4029 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
Smarca1Q6PGB8 Pak3-205ENSMUST00000112868 8163 ntAPPRIS P3 TSL 5 BASIC3.28□□□□□ -1.88
Smarca1Q6PGB8 Olfr835-202ENSMUST00000213018 2690 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Smarca1Q6PGB8 Olfr1369-ps1-205ENSMUST00000215941 3597 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Smarca1Q6PGB8 Vmn1r185-206ENSMUST00000227479 6525 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Smarca1Q6PGB8 Olfr1471-204ENSMUST00000217249 1662 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Smarca1Q6PGB8 Gm14355-201ENSMUST00000117352 264 ntBASIC3.28□□□□□ -1.88
Smarca1Q6PGB8 Gm14897-201ENSMUST00000118213 207 ntBASIC3.28□□□□□ -1.88
Smarca1Q6PGB8 Gm12515-201ENSMUST00000120116 361 ntBASIC3.28□□□□□ -1.88
Smarca1Q6PGB8 Gm1993-201ENSMUST00000120268 1131 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Smarca1Q6PGB8 Gm14333-201ENSMUST00000130484 264 ntBASIC3.28□□□□□ -1.88
Smarca1Q6PGB8 Gm24780-201ENSMUST00000157635 143 ntBASIC3.28□□□□□ -1.88
Smarca1Q6PGB8 Gm16043-201ENSMUST00000160030 616 ntTSL 3 BASIC3.28□□□□□ -1.88
Smarca1Q6PGB8 Vmn2r-ps132-201ENSMUST00000176738 651 ntBASIC3.28□□□□□ -1.88
Smarca1Q6PGB8 Trav7d-4-201ENSMUST00000178768 451 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Smarca1Q6PGB8 Gm25314-201ENSMUST00000178810 79 ntBASIC3.28□□□□□ -1.88
Smarca1Q6PGB8 Gm24862-201ENSMUST00000179103 79 ntBASIC3.28□□□□□ -1.88
Smarca1Q6PGB8 Gm23310-201ENSMUST00000179105 79 ntBASIC3.28□□□□□ -1.88
Smarca1Q6PGB8 Gm25461-201ENSMUST00000179293 79 ntBASIC3.28□□□□□ -1.88
Smarca1Q6PGB8 Trav7-4-201ENSMUST00000181728 451 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Smarca1Q6PGB8 Gm28000-201ENSMUST00000184380 85 ntBASIC3.28□□□□□ -1.88
Smarca1Q6PGB8 Gm20837-202ENSMUST00000190558 844 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Smarca1Q6PGB8 Gm28211-201ENSMUST00000190920 315 ntBASIC3.28□□□□□ -1.88
Smarca1Q6PGB8 Gm19694-201ENSMUST00000192364 505 ntBASIC3.28□□□□□ -1.88
Smarca1Q6PGB8 Gm43550-201ENSMUST00000200597 303 ntBASIC3.28□□□□□ -1.88
Smarca1Q6PGB8 Gm16368-201ENSMUST00000222340 435 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Smarca1Q6PGB8 AC241593.1-201ENSMUST00000224768 397 ntBASIC3.28□□□□□ -1.88
Smarca1Q6PGB8 Gm25202-201ENSMUST00000082838 191 ntBASIC3.28□□□□□ -1.88
Smarca1Q6PGB8 Olfr1245-202ENSMUST00000217402 2610 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Smarca1Q6PGB8 Gm37236-201ENSMUST00000193670 3249 ntBASIC3.28□□□□□ -1.88
Smarca1Q6PGB8 Mir499-201ENSMUST00000102357 79 ntBASIC3.27□□□□□ -1.89
Smarca1Q6PGB8 Gm22779-201ENSMUST00000104085 107 ntBASIC3.27□□□□□ -1.89
Smarca1Q6PGB8 Gm14448-201ENSMUST00000116383 210 ntBASIC3.27□□□□□ -1.89
Smarca1Q6PGB8 Gm12779-201ENSMUST00000121496 143 ntBASIC3.27□□□□□ -1.89
Smarca1Q6PGB8 Gm23183-201ENSMUST00000122595 323 ntBASIC3.27□□□□□ -1.89
Smarca1Q6PGB8 Mir3092-201ENSMUST00000174954 96 ntBASIC3.27□□□□□ -1.89
Smarca1Q6PGB8 Gm18588-201ENSMUST00000177308 492 ntBASIC3.27□□□□□ -1.89
Smarca1Q6PGB8 Scgb2b14-ps-201ENSMUST00000189424 336 ntBASIC3.27□□□□□ -1.89
Smarca1Q6PGB8 Olfr289-ps1-201ENSMUST00000192834 369 ntBASIC3.27□□□□□ -1.89
Smarca1Q6PGB8 Gm42925-201ENSMUST00000197359 285 ntBASIC3.27□□□□□ -1.89
Smarca1Q6PGB8 Igkv1-115-201ENSMUST00000198714 302 ntBASIC3.27□□□□□ -1.89
Smarca1Q6PGB8 Gm44726-201ENSMUST00000203427 217 ntBASIC3.27□□□□□ -1.89
Smarca1Q6PGB8 Gm44519-201ENSMUST00000206486 122 ntBASIC3.27□□□□□ -1.89
Smarca1Q6PGB8 4930431P19Rik-201ENSMUST00000207570 451 ntBASIC3.27□□□□□ -1.89
Smarca1Q6PGB8 Olfr1435-ps1-201ENSMUST00000207773 249 ntBASIC3.27□□□□□ -1.89
Smarca1Q6PGB8 AC105958.2-201ENSMUST00000214167 191 ntBASIC3.27□□□□□ -1.89
Smarca1Q6PGB8 CT572985.2-201ENSMUST00000220496 211 ntBASIC3.27□□□□□ -1.89
Smarca1Q6PGB8 AC116589.3-202ENSMUST00000221770 649 ntBASIC3.27□□□□□ -1.89
Smarca1Q6PGB8 AC116589.6-201ENSMUST00000222252 649 ntBASIC3.27□□□□□ -1.89
Smarca1Q6PGB8 Gm22577-201ENSMUST00000083731 109 ntBASIC3.27□□□□□ -1.89
Smarca1Q6PGB8 Mup1-201ENSMUST00000084548 776 ntAPPRIS ALT2 TSL 3 BASIC3.27□□□□□ -1.89
Smarca1Q6PGB8 Olfr1487-204ENSMUST00000216688 2038 ntTSL 5 BASIC3.27□□□□□ -1.89
Smarca1Q6PGB8 Gm42684-201ENSMUST00000197663 3615 ntBASIC3.27□□□□□ -1.89
Smarca1Q6PGB8 Gm14390-201ENSMUST00000117505 1695 ntBASIC3.27□□□□□ -1.89
Smarca1Q6PGB8 Olfr1052-203ENSMUST00000217166 1694 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Smarca1Q6PGB8 Olfr652-204ENSMUST00000219111 5329 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 85.8 ms