Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Gm11007-201ENSMUST00000177700 195 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
Rnf220Q6PDX6 Gm2007-201ENSMUST00000177981 195 ntTSL 5 BASIC3.53□□□□□ -1.84
Rnf220Q6PDX6 Gm2004-203ENSMUST00000179349 195 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
Rnf220Q6PDX6 Gm29397-201ENSMUST00000185205 333 ntBASIC3.53□□□□□ -1.84
Rnf220Q6PDX6 Gm18341-201ENSMUST00000197538 622 ntBASIC3.53□□□□□ -1.84
Rnf220Q6PDX6 Gm43739-201ENSMUST00000198294 307 ntBASIC3.53□□□□□ -1.84
Rnf220Q6PDX6 1700072O05Rik-201ENSMUST00000204672 321 ntTSL 5 BASIC3.53□□□□□ -1.84
Rnf220Q6PDX6 AC140254.1-201ENSMUST00000220063 331 ntBASIC3.53□□□□□ -1.84
Rnf220Q6PDX6 AC160550.3-201ENSMUST00000226818 400 ntBASIC3.53□□□□□ -1.84
Rnf220Q6PDX6 Sprr2e-201ENSMUST00000068399 647 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
Rnf220Q6PDX6 Gm26447-201ENSMUST00000082448 129 ntBASIC3.53□□□□□ -1.84
Rnf220Q6PDX6 Gm23041-201ENSMUST00000083868 106 ntBASIC3.53□□□□□ -1.84
Rnf220Q6PDX6 Gm22350-201ENSMUST00000083924 156 ntBASIC3.53□□□□□ -1.84
Rnf220Q6PDX6 Smim4-203ENSMUST00000090205 426 ntTSL 2 BASIC3.53□□□□□ -1.84
Rnf220Q6PDX6 Gm42888-201ENSMUST00000202425 4361 ntBASIC3.53□□□□□ -1.84
Rnf220Q6PDX6 Zfp934-202ENSMUST00000101547 2147 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Rnf220Q6PDX6 Vmn1r14-205ENSMUST00000227884 7542 ntAPPRIS P2 BASIC3.53□□□□□ -1.84
Rnf220Q6PDX6 Hsf3-202ENSMUST00000119035 2691 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
Rnf220Q6PDX6 Vmn2r71-201ENSMUST00000172338 2568 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.85
Rnf220Q6PDX6 Tsga10-204ENSMUST00000123082 3953 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.85
Rnf220Q6PDX6 Cdc27-203ENSMUST00000106962 3160 ntTSL 5 BASIC3.52□□□□□ -1.85
Rnf220Q6PDX6 Zfp273-203ENSMUST00000181391 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
Rnf220Q6PDX6 Olfr733-203ENSMUST00000214756 3640 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Rnf220Q6PDX6 Vma21-ps-201ENSMUST00000114578 306 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
Rnf220Q6PDX6 Gm26156-201ENSMUST00000116999 123 ntBASIC3.52□□□□□ -1.85
Rnf220Q6PDX6 Gm9157-201ENSMUST00000117673 225 ntBASIC3.52□□□□□ -1.85
Rnf220Q6PDX6 Gm12466-201ENSMUST00000121199 620 ntBASIC3.52□□□□□ -1.85
Rnf220Q6PDX6 Gm26312-201ENSMUST00000157769 165 ntBASIC3.52□□□□□ -1.85
Rnf220Q6PDX6 Gm26036-201ENSMUST00000158149 144 ntBASIC3.52□□□□□ -1.85
Rnf220Q6PDX6 Gm23198-201ENSMUST00000158811 91 ntBASIC3.52□□□□□ -1.85
Rnf220Q6PDX6 Gm24084-201ENSMUST00000175173 137 ntBASIC3.52□□□□□ -1.85
Rnf220Q6PDX6 Gm22131-201ENSMUST00000178415 94 ntBASIC3.52□□□□□ -1.85
Rnf220Q6PDX6 Gm6947-201ENSMUST00000186254 78 ntBASIC3.52□□□□□ -1.85
Rnf220Q6PDX6 Gm44409-201ENSMUST00000198810 166 ntBASIC3.52□□□□□ -1.85
Rnf220Q6PDX6 Gm4045-201ENSMUST00000204076 310 ntBASIC3.52□□□□□ -1.85
Rnf220Q6PDX6 AC187103.4-202ENSMUST00000225091 230 ntBASIC3.52□□□□□ -1.85
Rnf220Q6PDX6 Gm26107-201ENSMUST00000083972 107 ntBASIC3.52□□□□□ -1.85
Rnf220Q6PDX6 Ifi213-202ENSMUST00000150649 2748 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
Rnf220Q6PDX6 Olfr1184-202ENSMUST00000216675 3164 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Rnf220Q6PDX6 Gm43326-201ENSMUST00000198459 1638 ntBASIC3.52□□□□□ -1.85
Rnf220Q6PDX6 Rian-201ENSMUST00000180876 8089 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
Rnf220Q6PDX6 Gm24671-201ENSMUST00000104159 158 ntBASIC3.51□□□□□ -1.85
Rnf220Q6PDX6 Mir669g-201ENSMUST00000116809 123 ntBASIC3.51□□□□□ -1.85
Rnf220Q6PDX6 Gm12693-201ENSMUST00000121965 483 ntBASIC3.51□□□□□ -1.85
Rnf220Q6PDX6 Gm23123-201ENSMUST00000157648 144 ntBASIC3.51□□□□□ -1.85
Rnf220Q6PDX6 Gm24727-201ENSMUST00000158231 144 ntBASIC3.51□□□□□ -1.85
Rnf220Q6PDX6 Snord92-201ENSMUST00000175548 85 ntBASIC3.51□□□□□ -1.85
Rnf220Q6PDX6 Gm26962-201ENSMUST00000182545 265 ntTSL 3 BASIC3.51□□□□□ -1.85
Rnf220Q6PDX6 Gm27414-201ENSMUST00000185033 381 ntBASIC3.51□□□□□ -1.85
Rnf220Q6PDX6 Gm29414-201ENSMUST00000185379 448 ntTSL 3 BASIC3.51□□□□□ -1.85
Rnf220Q6PDX6 Gm2950-201ENSMUST00000185530 520 ntBASIC3.51□□□□□ -1.85
Rnf220Q6PDX6 Gm3952-201ENSMUST00000195093 573 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
Rnf220Q6PDX6 Trav5d-2-201ENSMUST00000196107 275 ntBASIC3.51□□□□□ -1.85
Rnf220Q6PDX6 Trav5n-2-201ENSMUST00000197136 275 ntBASIC3.51□□□□□ -1.85
Rnf220Q6PDX6 Gm19177-201ENSMUST00000204520 613 ntBASIC3.51□□□□□ -1.85
Rnf220Q6PDX6 Gm8940-201ENSMUST00000212585 219 ntBASIC3.51□□□□□ -1.85
Rnf220Q6PDX6 AC100590.2-201ENSMUST00000219028 215 ntBASIC3.51□□□□□ -1.85
Rnf220Q6PDX6 Gm25202-201ENSMUST00000082838 191 ntBASIC3.51□□□□□ -1.85
Rnf220Q6PDX6 Gm23727-201ENSMUST00000083352 164 ntBASIC3.51□□□□□ -1.85
Rnf220Q6PDX6 Mir34b-201ENSMUST00000083558 84 ntBASIC3.51□□□□□ -1.85
Rnf220Q6PDX6 Gm15292-201ENSMUST00000098895 385 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
Rnf220Q6PDX6 Gm42755-201ENSMUST00000198533 1493 ntBASIC3.51□□□□□ -1.85
Rnf220Q6PDX6 Olfr796-202ENSMUST00000214584 3554 ntAPPRIS P1 TSL 2 BASIC3.51□□□□□ -1.85
Rnf220Q6PDX6 Olfr1093-202ENSMUST00000213354 2240 ntAPPRIS P1 TSL 3 BASIC3.51□□□□□ -1.85
Rnf220Q6PDX6 Olfr837-202ENSMUST00000215699 3758 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
Rnf220Q6PDX6 Olfr298-204ENSMUST00000217110 3549 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
Rnf220Q6PDX6 Zfp616-201ENSMUST00000074813 5014 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Rnf220Q6PDX6 Nat1-201ENSMUST00000026677 1347 ntAPPRIS P2 BASIC3.5□□□□□ -1.85
Rnf220Q6PDX6 Gm36944-201ENSMUST00000192257 2759 ntBASIC3.5□□□□□ -1.85
Rnf220Q6PDX6 Vmn1r66-205ENSMUST00000228622 3304 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
Rnf220Q6PDX6 Snord70-201ENSMUST00000104157 87 ntBASIC3.5□□□□□ -1.85
Rnf220Q6PDX6 Gm26273-201ENSMUST00000104180 131 ntBASIC3.5□□□□□ -1.85
Rnf220Q6PDX6 Gm12190-201ENSMUST00000120001 187 ntBASIC3.5□□□□□ -1.85
Rnf220Q6PDX6 Gm13656-201ENSMUST00000123829 345 ntTSL 3 BASIC3.5□□□□□ -1.85
Rnf220Q6PDX6 8030453O22Rik-201ENSMUST00000128919 370 ntTSL 3 BASIC3.5□□□□□ -1.85
Rnf220Q6PDX6 Gm15733-201ENSMUST00000132957 242 ntBASIC3.5□□□□□ -1.85
Rnf220Q6PDX6 C330018D20Rik-202ENSMUST00000139243 726 ntAPPRIS P1 TSL 3 BASIC3.5□□□□□ -1.85
Rnf220Q6PDX6 Gm17065-201ENSMUST00000165245 239 ntBASIC3.5□□□□□ -1.85
Rnf220Q6PDX6 Gm24487-201ENSMUST00000178017 63 ntBASIC3.5□□□□□ -1.85
Rnf220Q6PDX6 Ighv1-17-1-201ENSMUST00000194849 351 ntBASIC3.5□□□□□ -1.85
Rnf220Q6PDX6 Gm4248-201ENSMUST00000196905 316 ntBASIC3.5□□□□□ -1.85
Rnf220Q6PDX6 Gm43155-201ENSMUST00000202661 494 ntBASIC3.5□□□□□ -1.85
Rnf220Q6PDX6 Gm32222-201ENSMUST00000203296 298 ntBASIC3.5□□□□□ -1.85
Rnf220Q6PDX6 Gm44524-201ENSMUST00000203899 271 ntBASIC3.5□□□□□ -1.85
Rnf220Q6PDX6 Gm44259-201ENSMUST00000204996 298 ntBASIC3.5□□□□□ -1.85
Rnf220Q6PDX6 Gm44085-201ENSMUST00000205056 372 ntTSL 3 BASIC3.5□□□□□ -1.85
Rnf220Q6PDX6 AC154552.1-201ENSMUST00000222969 202 ntBASIC3.5□□□□□ -1.85
Rnf220Q6PDX6 AC133156.1-202ENSMUST00000227284 363 ntBASIC3.5□□□□□ -1.85
Rnf220Q6PDX6 Gm5265-201ENSMUST00000076828 342 ntBASIC3.5□□□□□ -1.85
Rnf220Q6PDX6 Mir26a-2-201ENSMUST00000083496 84 ntBASIC3.5□□□□□ -1.85
Rnf220Q6PDX6 Hhla1-201ENSMUST00000100584 2262 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
Rnf220Q6PDX6 Olfr1042-202ENSMUST00000215624 5096 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
Rnf220Q6PDX6 Gm12128-201ENSMUST00000131013 2914 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
Rnf220Q6PDX6 4921511C20Rik-201ENSMUST00000051530 1606 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
Rnf220Q6PDX6 Gm23941-201ENSMUST00000101953 107 ntBASIC3.49□□□□□ -1.85
Rnf220Q6PDX6 Mir193b-201ENSMUST00000103784 79 ntBASIC3.49□□□□□ -1.85
Rnf220Q6PDX6 Tmc4-ps-201ENSMUST00000117819 258 ntBASIC3.49□□□□□ -1.85
Rnf220Q6PDX6 Gm13852-201ENSMUST00000122350 242 ntBASIC3.49□□□□□ -1.85
Rnf220Q6PDX6 Scml1-201ENSMUST00000136860 576 ntTSL 3 BASIC3.49□□□□□ -1.85
Rnf220Q6PDX6 Gm25965-201ENSMUST00000157170 93 ntBASIC3.49□□□□□ -1.85
Retrieved 100 of 76,532 protein–RNA pairs in 81.2 ms