Protein–RNA interactions for Protein: Q63870

Col7a1, Collagen alpha-1(VII) chain, mousemouse

Predictions only

Length 2,944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1Q63870 Gm43284-201ENSMUST00000200103 253 ntBASIC0.59□□□□□ -2.32
Col7a1Q63870 Gm45715-201ENSMUST00000206991 434 ntTSL 3 BASIC0.59□□□□□ -2.32
Col7a1Q63870 AC121942.2-201ENSMUST00000223824 600 ntBASIC0.59□□□□□ -2.32
Col7a1Q63870 2410141K09Rik-201ENSMUST00000091541 288 ntTSL 5 BASIC0.59□□□□□ -2.32
Col7a1Q63870 4930473O22Rik-201ENSMUST00000218283 1465 ntTSL 1 (best) BASIC0.59□□□□□ -2.32
Col7a1Q63870 Olfr606-202ENSMUST00000214631 2649 ntAPPRIS P1 TSL 5 BASIC0.58□□□□□ -2.32
Col7a1Q63870 Gm25994-201ENSMUST00000175392 101 ntBASIC0.58□□□□□ -2.32
Col7a1Q63870 Gm29322-201ENSMUST00000185378 582 ntTSL 5 BASIC0.58□□□□□ -2.32
Col7a1Q63870 6430573P05Rik-201ENSMUST00000192562 508 ntTSL 5 BASIC0.58□□□□□ -2.32
Col7a1Q63870 Olfr850-202ENSMUST00000211832 947 ntAPPRIS ALT2 BASIC0.58□□□□□ -2.32
Col7a1Q63870 Gm45754-201ENSMUST00000212380 279 ntBASIC0.58□□□□□ -2.32
Col7a1Q63870 Spag11b-201ENSMUST00000039075 342 ntAPPRIS P1 TSL 1 (best) BASIC0.58□□□□□ -2.32
Col7a1Q63870 Olfr138-201ENSMUST00000071871 939 ntAPPRIS P1 BASIC0.58□□□□□ -2.32
Col7a1Q63870 Olfr850-201ENSMUST00000077347 948 ntAPPRIS P2 BASIC0.58□□□□□ -2.32
Col7a1Q63870 Arhgap5-202ENSMUST00000217820 2332 ntTSL 5 BASIC0.58□□□□□ -2.32
Col7a1Q63870 Gm34240-201ENSMUST00000192500 1936 ntTSL 1 (best) BASIC0.58□□□□□ -2.32
Col7a1Q63870 Olfr1109-203ENSMUST00000217066 2384 ntAPPRIS P1 TSL 5 BASIC0.58□□□□□ -2.32
Col7a1Q63870 AU041133-201ENSMUST00000105314 1494 ntTSL 5 BASIC0.58□□□□□ -2.32
Col7a1Q63870 Mir147-201ENSMUST00000102354 79 ntBASIC0.58□□□□□ -2.32
Col7a1Q63870 Mir574-201ENSMUST00000103854 78 ntBASIC0.58□□□□□ -2.32
Col7a1Q63870 Gm25321-201ENSMUST00000122558 102 ntBASIC0.58□□□□□ -2.32
Col7a1Q63870 AC147560.1-201ENSMUST00000197528 107 ntBASIC0.58□□□□□ -2.32
Col7a1Q63870 AC113031.2-201ENSMUST00000226132 579 ntBASIC0.58□□□□□ -2.32
Col7a1Q63870 Olfr731-201ENSMUST00000059565 981 ntAPPRIS P1 BASIC0.58□□□□□ -2.32
Col7a1Q63870 Defb41-202ENSMUST00000097817 198 ntAPPRIS P1 TSL 1 (best) BASIC0.58□□□□□ -2.32
Col7a1Q63870 Crs-ps-201ENSMUST00000203723 760 ntBASIC0.58□□□□□ -2.32
Col7a1Q63870 Gm45365-201ENSMUST00000209489 256 ntBASIC0.58□□□□□ -2.32
Col7a1Q63870 Gm45530-201ENSMUST00000211658 225 ntBASIC0.58□□□□□ -2.32
Col7a1Q63870 AC158395.1-201ENSMUST00000227206 452 ntBASIC0.58□□□□□ -2.32
Col7a1Q63870 mt-Tl1-201ENSMUST00000082391 75 ntBASIC0.58□□□□□ -2.32
Col7a1Q63870 Gm17976-201ENSMUST00000184037 1909 ntBASIC0.57□□□□□ -2.32
Col7a1Q63870 Gm26363-201ENSMUST00000158866 83 ntBASIC0.57□□□□□ -2.32
Col7a1Q63870 Gm27025-201ENSMUST00000182392 942 ntBASIC0.57□□□□□ -2.32
Col7a1Q63870 Gm29009-201ENSMUST00000186340 496 ntTSL 5 BASIC0.57□□□□□ -2.32
Col7a1Q63870 Gm37361-201ENSMUST00000194345 132 ntBASIC0.57□□□□□ -2.32
Col7a1Q63870 Gm43250-201ENSMUST00000196536 273 ntBASIC0.57□□□□□ -2.32
Col7a1Q63870 AC147101.2-201ENSMUST00000219756 184 ntBASIC0.57□□□□□ -2.32
Col7a1Q63870 AC130222.1-201ENSMUST00000221198 256 ntBASIC0.57□□□□□ -2.32
Col7a1Q63870 1700127F24Rik-202ENSMUST00000223214 259 ntTSL 3 BASIC0.57□□□□□ -2.32
Col7a1Q63870 Gm6109-201ENSMUST00000223297 348 ntBASIC0.57□□□□□ -2.32
Col7a1Q63870 Gm12065-201ENSMUST00000149592 656 ntTSL 3 BASIC0.57□□□□□ -2.32
Col7a1Q63870 Gm24559-201ENSMUST00000157519 121 ntBASIC0.57□□□□□ -2.32
Col7a1Q63870 Gm37219-201ENSMUST00000192036 926 ntBASIC0.57□□□□□ -2.32
Col7a1Q63870 Gm9373-201ENSMUST00000208724 599 ntBASIC0.57□□□□□ -2.32
Col7a1Q63870 Gm45367-201ENSMUST00000210171 347 ntBASIC0.57□□□□□ -2.32
Col7a1Q63870 Olfr780-201ENSMUST00000063168 1025 ntAPPRIS P1 BASIC0.57□□□□□ -2.32
Col7a1Q63870 n-R5s197-201ENSMUST00000083302 119 ntBASIC0.57□□□□□ -2.32
Col7a1Q63870 Gm14444-202ENSMUST00000109070 1281 ntAPPRIS P1 TSL 3 BASIC0.56□□□□□ -2.32
Col7a1Q63870 Gm12325-201ENSMUST00000135553 320 ntTSL 5 BASIC0.56□□□□□ -2.32
Col7a1Q63870 Gm24222-201ENSMUST00000158834 93 ntBASIC0.56□□□□□ -2.32
Col7a1Q63870 Vmn2r-ps65-201ENSMUST00000173309 220 ntBASIC0.56□□□□□ -2.32
Col7a1Q63870 Gm24813-201ENSMUST00000175310 84 ntBASIC0.56□□□□□ -2.32
Col7a1Q63870 Vmn1r-ps143-201ENSMUST00000176730 604 ntBASIC0.56□□□□□ -2.32
Col7a1Q63870 Gm20561-201ENSMUST00000188131 292 ntBASIC0.56□□□□□ -2.32
Col7a1Q63870 Trbv6-201ENSMUST00000193743 276 ntBASIC0.56□□□□□ -2.32
Col7a1Q63870 AC160123.1-201ENSMUST00000213443 570 ntTSL 5 BASIC0.56□□□□□ -2.32
Col7a1Q63870 AC073947.3-201ENSMUST00000215576 766 ntBASIC0.56□□□□□ -2.32
Col7a1Q63870 Olfr937-202ENSMUST00000215049 2259 ntAPPRIS P1 TSL 3 BASIC0.56□□□□□ -2.32
Col7a1Q63870 Gm25611-201ENSMUST00000104017 133 ntBASIC0.56□□□□□ -2.32
Col7a1Q63870 Gm14786-201ENSMUST00000117127 944 ntBASIC0.56□□□□□ -2.32
Col7a1Q63870 Gm14833-201ENSMUST00000118345 1027 ntBASIC0.56□□□□□ -2.32
Col7a1Q63870 Gm23672-201ENSMUST00000157471 107 ntBASIC0.56□□□□□ -2.32
Col7a1Q63870 Ear10-201ENSMUST00000159175 678 ntAPPRIS P1 TSL 1 (best) BASIC0.56□□□□□ -2.32
Col7a1Q63870 Gm10298-201ENSMUST00000074801 265 ntBASIC0.56□□□□□ -2.32
Col7a1Q63870 n-R5s207-201ENSMUST00000122497 118 ntBASIC0.55□□□□□ -2.32
Col7a1Q63870 Gm22075-201ENSMUST00000158599 192 ntBASIC0.55□□□□□ -2.32
Col7a1Q63870 Vmn2r-ps55-201ENSMUST00000173834 240 ntBASIC0.55□□□□□ -2.32
Col7a1Q63870 Olfr1325-203ENSMUST00000216108 3535 ntAPPRIS ALT2 TSL 5 BASIC0.55□□□□□ -2.32
Col7a1Q63870 Gm24865-201ENSMUST00000103246 96 ntBASIC0.55□□□□□ -2.32
Col7a1Q63870 Gm11786-201ENSMUST00000120799 155 ntBASIC0.55□□□□□ -2.32
Col7a1Q63870 Gm22107-201ENSMUST00000122548 100 ntBASIC0.55□□□□□ -2.32
Col7a1Q63870 Gm8676-201ENSMUST00000184206 637 ntBASIC0.55□□□□□ -2.32
Col7a1Q63870 Gm29492-201ENSMUST00000187124 457 ntBASIC0.55□□□□□ -2.32
Col7a1Q63870 Gm29051-201ENSMUST00000190184 369 ntTSL 5 BASIC0.55□□□□□ -2.32
Col7a1Q63870 Gm37062-201ENSMUST00000195028 701 ntTSL 5 BASIC0.55□□□□□ -2.32
Col7a1Q63870 AC159622.3-201ENSMUST00000221010 361 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
Col7a1Q63870 CT030159.4-201ENSMUST00000221966 395 ntBASIC0.55□□□□□ -2.32
Col7a1Q63870 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
Col7a1Q63870 Gm42755-201ENSMUST00000198533 1493 ntBASIC0.55□□□□□ -2.32
Col7a1Q63870 Gm22482-201ENSMUST00000122563 359 ntBASIC0.54□□□□□ -2.32
Col7a1Q63870 Gm25341-201ENSMUST00000157461 268 ntBASIC0.54□□□□□ -2.32
Col7a1Q63870 Gm15564-202ENSMUST00000173605 402 ntTSL 1 (best) BASIC0.54□□□□□ -2.32
Col7a1Q63870 Vmn2r-ps70-201ENSMUST00000174636 302 ntBASIC0.54□□□□□ -2.32
Col7a1Q63870 Ighv15-1-201ENSMUST00000194450 276 ntBASIC0.54□□□□□ -2.32
Col7a1Q63870 Gm18611-201ENSMUST00000200334 1118 ntBASIC0.54□□□□□ -2.32
Col7a1Q63870 Gm43578-201ENSMUST00000201250 459 ntBASIC0.54□□□□□ -2.32
Col7a1Q63870 Iglv3-201ENSMUST00000103751 381 ntAPPRIS P1 BASIC0.54□□□□□ -2.32
Col7a1Q63870 Gm24878-201ENSMUST00000158782 104 ntBASIC0.54□□□□□ -2.32
Col7a1Q63870 Vmn1r-ps47-201ENSMUST00000176694 907 ntBASIC0.54□□□□□ -2.32
Col7a1Q63870 Gm42438-201ENSMUST00000197832 974 ntBASIC0.54□□□□□ -2.32
Col7a1Q63870 Gm29920-201ENSMUST00000206876 754 ntBASIC0.54□□□□□ -2.32
Col7a1Q63870 AC123860.1-201ENSMUST00000228033 481 ntBASIC0.54□□□□□ -2.32
Col7a1Q63870 Gm24207-201ENSMUST00000082781 108 ntBASIC0.54□□□□□ -2.32
Col7a1Q63870 Mir290a-201ENSMUST00000104627 83 ntBASIC0.54□□□□□ -2.32
Col7a1Q63870 Mup-ps1-201ENSMUST00000120720 544 ntBASIC0.54□□□□□ -2.32
Col7a1Q63870 Mir1904-201ENSMUST00000122702 80 ntBASIC0.54□□□□□ -2.32
Col7a1Q63870 Gm22515-201ENSMUST00000158273 305 ntBASIC0.54□□□□□ -2.32
Col7a1Q63870 Mup-ps8-201ENSMUST00000178663 545 ntBASIC0.54□□□□□ -2.32
Col7a1Q63870 Mup-ps6-201ENSMUST00000179564 545 ntBASIC0.54□□□□□ -2.32
Col7a1Q63870 Olfr931-ps1-201ENSMUST00000214941 549 ntBASIC0.54□□□□□ -2.32
Retrieved 100 of 76,532 protein–RNA pairs in 78.9 ms