Protein–RNA interactions for Protein: Q62231

Six1, Homeobox protein SIX1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six1Q62231 Gm25628-201ENSMUST00000084002 105 ntBASIC2.53□□□□□ -2
Six1Q62231 Gm42524-201ENSMUST00000202881 2214 ntTSL 1 (best) BASIC2.53□□□□□ -2
Six1Q62231 Gm42482-201ENSMUST00000198904 1947 ntBASIC2.52□□□□□ -2.01
Six1Q62231 Gm37903-201ENSMUST00000192122 2381 ntBASIC2.52□□□□□ -2.01
Six1Q62231 Olfr811-204ENSMUST00000217571 2399 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Six1Q62231 Slco6c1-202ENSMUST00000189547 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
Six1Q62231 Mir344c-201ENSMUST00000103919 92 ntBASIC2.52□□□□□ -2.01
Six1Q62231 Gm24889-201ENSMUST00000104388 132 ntBASIC2.52□□□□□ -2.01
Six1Q62231 Gm11512-201ENSMUST00000119669 663 ntBASIC2.52□□□□□ -2.01
Six1Q62231 Gm16354-201ENSMUST00000155376 150 ntBASIC2.52□□□□□ -2.01
Six1Q62231 Gm25624-201ENSMUST00000157222 275 ntBASIC2.52□□□□□ -2.01
Six1Q62231 Gm23332-201ENSMUST00000157424 275 ntBASIC2.52□□□□□ -2.01
Six1Q62231 4930579O11Rik-202ENSMUST00000168243 672 ntTSL 3 BASIC2.52□□□□□ -2.01
Six1Q62231 Gm27226-201ENSMUST00000184676 511 ntTSL 2 BASIC2.52□□□□□ -2.01
Six1Q62231 Gm29597-201ENSMUST00000188035 308 ntBASIC2.52□□□□□ -2.01
Six1Q62231 Gm43722-201ENSMUST00000196054 124 ntBASIC2.52□□□□□ -2.01
Six1Q62231 Gm42604-201ENSMUST00000200077 801 ntTSL 3 BASIC2.52□□□□□ -2.01
Six1Q62231 Olfr1482-ps1-201ENSMUST00000207181 178 ntBASIC2.52□□□□□ -2.01
Six1Q62231 Gm44808-201ENSMUST00000208887 264 ntTSL 5 BASIC2.52□□□□□ -2.01
Six1Q62231 Gm45344-201ENSMUST00000211610 341 ntBASIC2.52□□□□□ -2.01
Six1Q62231 Gm18696-201ENSMUST00000220103 274 ntBASIC2.52□□□□□ -2.01
Six1Q62231 Ear14-201ENSMUST00000049559 468 ntBASIC2.52□□□□□ -2.01
Six1Q62231 Gm10717-201ENSMUST00000075573 684 ntTSL 5 BASIC2.52□□□□□ -2.01
Six1Q62231 Gm25411-201ENSMUST00000083760 151 ntBASIC2.52□□□□□ -2.01
Six1Q62231 Olfr1256-204ENSMUST00000215613 4543 ntAPPRIS P1 TSL 3 BASIC2.52□□□□□ -2.01
Six1Q62231 Gm20345-201ENSMUST00000175839 2414 ntBASIC2.52□□□□□ -2.01
Six1Q62231 Omd-201ENSMUST00000065494 1556 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
Six1Q62231 Gm42659-201ENSMUST00000196955 1754 ntBASIC2.51□□□□□ -2.01
Six1Q62231 Gm381-201ENSMUST00000117443 2037 ntBASIC2.51□□□□□ -2.01
Six1Q62231 Mir1195-201ENSMUST00000116818 98 ntBASIC2.51□□□□□ -2.01
Six1Q62231 Gm15175-201ENSMUST00000117629 132 ntBASIC2.51□□□□□ -2.01
Six1Q62231 Gm7123-201ENSMUST00000117647 213 ntBASIC2.51□□□□□ -2.01
Six1Q62231 Gm12806-201ENSMUST00000119384 268 ntBASIC2.51□□□□□ -2.01
Six1Q62231 Gm22957-201ENSMUST00000122511 123 ntBASIC2.51□□□□□ -2.01
Six1Q62231 Gm25270-201ENSMUST00000122606 138 ntBASIC2.51□□□□□ -2.01
Six1Q62231 Gm22026-201ENSMUST00000122735 281 ntBASIC2.51□□□□□ -2.01
Six1Q62231 Gm25391-201ENSMUST00000157342 134 ntBASIC2.51□□□□□ -2.01
Six1Q62231 H3f3aos-202ENSMUST00000159740 229 ntTSL 5 BASIC2.51□□□□□ -2.01
Six1Q62231 Gm20698-201ENSMUST00000175657 233 ntBASIC2.51□□□□□ -2.01
Six1Q62231 Gm26870-201ENSMUST00000181242 1170 ntTSL 5 BASIC2.51□□□□□ -2.01
Six1Q62231 Gm26968-201ENSMUST00000182894 481 ntBASIC2.51□□□□□ -2.01
Six1Q62231 Gm27220-201ENSMUST00000183453 262 ntBASIC2.51□□□□□ -2.01
Six1Q62231 Gm27490-201ENSMUST00000184754 128 ntBASIC2.51□□□□□ -2.01
Six1Q62231 Gm29276-201ENSMUST00000190453 932 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
Six1Q62231 Gm43431-201ENSMUST00000198577 340 ntBASIC2.51□□□□□ -2.01
Six1Q62231 Gm44465-201ENSMUST00000199536 114 ntBASIC2.51□□□□□ -2.01
Six1Q62231 Gm43367-201ENSMUST00000199986 625 ntBASIC2.51□□□□□ -2.01
Six1Q62231 Gm44012-201ENSMUST00000204154 424 ntTSL 3 BASIC2.51□□□□□ -2.01
Six1Q62231 Olfr848-ps1-201ENSMUST00000212241 930 ntBASIC2.51□□□□□ -2.01
Six1Q62231 AC160550.3-201ENSMUST00000226818 400 ntBASIC2.51□□□□□ -2.01
Six1Q62231 Olfr305-201ENSMUST00000069236 960 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
Six1Q62231 Gm22061-201ENSMUST00000082557 107 ntBASIC2.51□□□□□ -2.01
Six1Q62231 Gm25853-201ENSMUST00000082793 132 ntBASIC2.51□□□□□ -2.01
Six1Q62231 Gm4224-201ENSMUST00000211557 1594 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
Six1Q62231 AC125223.3-201ENSMUST00000223588 2067 ntBASIC2.51□□□□□ -2.01
Six1Q62231 Gm7173-205ENSMUST00000197180 9412 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
Six1Q62231 Nexn-211ENSMUST00000199423 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC2.51□□□□□ -2.01
Six1Q62231 Vmn2r71-201ENSMUST00000172338 2568 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Six1Q62231 Gm10486-201ENSMUST00000101647 924 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
Six1Q62231 Gm14632-201ENSMUST00000101654 864 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
Six1Q62231 Mir669o-201ENSMUST00000103898 96 ntBASIC2.5□□□□□ -2.01
Six1Q62231 Gm26147-201ENSMUST00000104479 114 ntBASIC2.5□□□□□ -2.01
Six1Q62231 Gm5483-201ENSMUST00000114858 414 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
Six1Q62231 Gm12803-201ENSMUST00000118907 821 ntBASIC2.5□□□□□ -2.01
Six1Q62231 Gm6806-201ENSMUST00000120092 1006 ntBASIC2.5□□□□□ -2.01
Six1Q62231 Gm11471-201ENSMUST00000121824 198 ntBASIC2.5□□□□□ -2.01
Six1Q62231 Gm14821-201ENSMUST00000121975 435 ntBASIC2.5□□□□□ -2.01
Six1Q62231 n-R5s216-201ENSMUST00000122755 112 ntBASIC2.5□□□□□ -2.01
Six1Q62231 5330434G04Rik-201ENSMUST00000130264 511 ntTSL 3 BASIC2.5□□□□□ -2.01
Six1Q62231 Gm22225-201ENSMUST00000157358 278 ntBASIC2.5□□□□□ -2.01
Six1Q62231 Gm24546-201ENSMUST00000158652 102 ntBASIC2.5□□□□□ -2.01
Six1Q62231 Gm21858-202ENSMUST00000185713 923 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
Six1Q62231 Gm21409-201ENSMUST00000186110 923 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
Six1Q62231 Gm28961-201ENSMUST00000190573 923 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
Six1Q62231 Gm37743-201ENSMUST00000194645 376 ntBASIC2.5□□□□□ -2.01
Six1Q62231 Gm42425-201ENSMUST00000197756 565 ntTSL 5 BASIC2.5□□□□□ -2.01
Six1Q62231 Gm18982-201ENSMUST00000198118 529 ntBASIC2.5□□□□□ -2.01
Six1Q62231 Mir3069-201ENSMUST00000198802 65 ntBASIC2.5□□□□□ -2.01
Six1Q62231 Gm44161-201ENSMUST00000203532 253 ntBASIC2.5□□□□□ -2.01
Six1Q62231 Gm44519-201ENSMUST00000206486 122 ntBASIC2.5□□□□□ -2.01
Six1Q62231 Olfr1430-ps1-201ENSMUST00000207422 917 ntBASIC2.5□□□□□ -2.01
Six1Q62231 Gm45459-201ENSMUST00000209882 442 ntTSL 5 BASIC2.5□□□□□ -2.01
Six1Q62231 Gm45455-202ENSMUST00000211156 630 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
Six1Q62231 CT025606.1-201ENSMUST00000218273 324 ntBASIC2.5□□□□□ -2.01
Six1Q62231 Gm29809-201ENSMUST00000218423 493 ntBASIC2.5□□□□□ -2.01
Six1Q62231 CAAA01090905.1-201ENSMUST00000219056 426 ntTSL 2 BASIC2.5□□□□□ -2.01
Six1Q62231 Gm33981-201ENSMUST00000219918 660 ntTSL 5 BASIC2.5□□□□□ -2.01
Six1Q62231 AC154527.5-201ENSMUST00000224448 496 ntBASIC2.5□□□□□ -2.01
Six1Q62231 AC167192.2-201ENSMUST00000224794 198 ntBASIC2.5□□□□□ -2.01
Six1Q62231 AC154747.1-201ENSMUST00000225265 239 ntBASIC2.5□□□□□ -2.01
Six1Q62231 Olfr769-201ENSMUST00000050915 1084 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
Six1Q62231 Gm10088-201ENSMUST00000074116 423 ntBASIC2.5□□□□□ -2.01
Six1Q62231 Gm10147-201ENSMUST00000075388 864 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
Six1Q62231 Gm23850-201ENSMUST00000083830 169 ntBASIC2.5□□□□□ -2.01
Six1Q62231 Olfr895-201ENSMUST00000093864 951 ntBASIC2.5□□□□□ -2.01
Six1Q62231 Gm6185-201ENSMUST00000193379 3553 ntBASIC2.5□□□□□ -2.01
Six1Q62231 Olfr814-202ENSMUST00000213742 3798 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
Six1Q62231 Vmn1r178-203ENSMUST00000226489 2644 ntBASIC2.49□□□□□ -2.01
Six1Q62231 Gm15084-201ENSMUST00000178585 1502 ntBASIC2.49□□□□□ -2.01
Six1Q62231 Gm22834-201ENSMUST00000102021 79 ntBASIC2.49□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 80 ms