Protein–RNA interactions for Protein: Q62158

Trim27, Zinc finger protein RFP, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim27Q62158 AC069561.2-201ENSMUST00000217596 420 ntBASIC3.09□□□□□ -1.91
Trim27Q62158 Gm35558-203ENSMUST00000222264 204 ntBASIC3.09□□□□□ -1.91
Trim27Q62158 AC123860.1-201ENSMUST00000228033 481 ntBASIC3.09□□□□□ -1.91
Trim27Q62158 Sult2a6-201ENSMUST00000076576 961 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
Trim27Q62158 Gm22154-201ENSMUST00000083844 131 ntBASIC3.09□□□□□ -1.91
Trim27Q62158 Vmn1r172-202ENSMUST00000173101 9109 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
Trim27Q62158 Gm38071-201ENSMUST00000195792 3378 ntBASIC3.09□□□□□ -1.92
Trim27Q62158 Gm3563-201ENSMUST00000172963 1628 ntBASIC3.08□□□□□ -1.92
Trim27Q62158 Olfr347-202ENSMUST00000216882 3385 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Trim27Q62158 Olfr1229-203ENSMUST00000214593 3404 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Trim27Q62158 Gm22831-201ENSMUST00000102473 109 ntBASIC3.08□□□□□ -1.92
Trim27Q62158 Dppa1-202ENSMUST00000109227 551 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
Trim27Q62158 Gm22709-201ENSMUST00000116893 111 ntBASIC3.08□□□□□ -1.92
Trim27Q62158 Gm11712-201ENSMUST00000129139 367 ntTSL 5 BASIC3.08□□□□□ -1.92
Trim27Q62158 Ppp1r2-ps7-201ENSMUST00000140102 609 ntBASIC3.08□□□□□ -1.92
Trim27Q62158 H3f3aos-202ENSMUST00000159740 229 ntTSL 5 BASIC3.08□□□□□ -1.92
Trim27Q62158 Fam184a-206ENSMUST00000169866 501 ntTSL 5 BASIC3.08□□□□□ -1.92
Trim27Q62158 Vmn2r-ps33-201ENSMUST00000175691 904 ntBASIC3.08□□□□□ -1.92
Trim27Q62158 Gm23144-201ENSMUST00000180226 107 ntBASIC3.08□□□□□ -1.92
Trim27Q62158 Gm27379-201ENSMUST00000183730 123 ntBASIC3.08□□□□□ -1.92
Trim27Q62158 Mir6335-201ENSMUST00000184081 98 ntBASIC3.08□□□□□ -1.92
Trim27Q62158 Gm28399-201ENSMUST00000186221 318 ntBASIC3.08□□□□□ -1.92
Trim27Q62158 Gm28572-201ENSMUST00000187444 318 ntBASIC3.08□□□□□ -1.92
Trim27Q62158 Rpl23a-ps9-201ENSMUST00000188369 463 ntBASIC3.08□□□□□ -1.92
Trim27Q62158 Rpl23a-ps11-201ENSMUST00000191583 463 ntBASIC3.08□□□□□ -1.92
Trim27Q62158 Gm37869-201ENSMUST00000193385 595 ntBASIC3.08□□□□□ -1.92
Trim27Q62158 1700108N06Rik-201ENSMUST00000196572 681 ntTSL 5 BASIC3.08□□□□□ -1.92
Trim27Q62158 Igkv4-60-201ENSMUST00000200639 358 ntBASIC3.08□□□□□ -1.92
Trim27Q62158 Gm44073-201ENSMUST00000204173 429 ntTSL 3 BASIC3.08□□□□□ -1.92
Trim27Q62158 Gm45344-201ENSMUST00000211610 341 ntBASIC3.08□□□□□ -1.92
Trim27Q62158 AC112274.2-201ENSMUST00000218436 170 ntBASIC3.08□□□□□ -1.92
Trim27Q62158 CT030182.3-201ENSMUST00000225986 582 ntBASIC3.08□□□□□ -1.92
Trim27Q62158 Gm4945-201ENSMUST00000075152 453 ntBASIC3.08□□□□□ -1.92
Trim27Q62158 Gm25859-201ENSMUST00000083710 91 ntBASIC3.08□□□□□ -1.92
Trim27Q62158 Gm24817-201ENSMUST00000093672 105 ntBASIC3.08□□□□□ -1.92
Trim27Q62158 Mir682-201ENSMUST00000102281 96 ntBASIC3.07□□□□□ -1.92
Trim27Q62158 Mir450-2-201ENSMUST00000102444 69 ntBASIC3.07□□□□□ -1.92
Trim27Q62158 Snora36b-201ENSMUST00000104383 132 ntBASIC3.07□□□□□ -1.92
Trim27Q62158 Gm6096-201ENSMUST00000105172 456 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
Trim27Q62158 Gm15175-201ENSMUST00000117629 132 ntBASIC3.07□□□□□ -1.92
Trim27Q62158 Gm15986-201ENSMUST00000122153 400 ntBASIC3.07□□□□□ -1.92
Trim27Q62158 Gm24839-201ENSMUST00000122602 107 ntBASIC3.07□□□□□ -1.92
Trim27Q62158 Gm15218-201ENSMUST00000131006 618 ntTSL 5 BASIC3.07□□□□□ -1.92
Trim27Q62158 Gm23599-201ENSMUST00000157261 251 ntBASIC3.07□□□□□ -1.92
Trim27Q62158 Gm9071-201ENSMUST00000165915 474 ntBASIC3.07□□□□□ -1.92
Trim27Q62158 Gm8114-201ENSMUST00000172225 484 ntBASIC3.07□□□□□ -1.92
Trim27Q62158 Gm20543-201ENSMUST00000174200 726 ntBASIC3.07□□□□□ -1.92
Trim27Q62158 Gm8532-201ENSMUST00000179174 461 ntBASIC3.07□□□□□ -1.92
Trim27Q62158 Gm24518-201ENSMUST00000180275 94 ntBASIC3.07□□□□□ -1.92
Trim27Q62158 Mir7014-201ENSMUST00000183853 63 ntBASIC3.07□□□□□ -1.92
Trim27Q62158 Gm28000-201ENSMUST00000184380 85 ntBASIC3.07□□□□□ -1.92
Trim27Q62158 Scgb2b14-ps-201ENSMUST00000189424 336 ntBASIC3.07□□□□□ -1.92
Trim27Q62158 Gm29185-201ENSMUST00000190578 516 ntTSL 5 BASIC3.07□□□□□ -1.92
Trim27Q62158 Gm43626-201ENSMUST00000198575 162 ntBASIC3.07□□□□□ -1.92
Trim27Q62158 Gm42604-201ENSMUST00000200077 801 ntTSL 3 BASIC3.07□□□□□ -1.92
Trim27Q62158 Gm44425-201ENSMUST00000203739 429 ntBASIC3.07□□□□□ -1.92
Trim27Q62158 Gm44012-201ENSMUST00000204154 424 ntTSL 3 BASIC3.07□□□□□ -1.92
Trim27Q62158 Gm19032-201ENSMUST00000208584 592 ntBASIC3.07□□□□□ -1.92
Trim27Q62158 Olfr752-ps1-201ENSMUST00000208736 1141 ntBASIC3.07□□□□□ -1.92
Trim27Q62158 Gm8031-201ENSMUST00000213430 626 ntBASIC3.07□□□□□ -1.92
Trim27Q62158 AC160984.2-201ENSMUST00000224927 791 ntBASIC3.07□□□□□ -1.92
Trim27Q62158 AC161758.2-201ENSMUST00000228513 218 ntBASIC3.07□□□□□ -1.92
Trim27Q62158 Olfr394-201ENSMUST00000071478 933 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
Trim27Q62158 Olfr235-201ENSMUST00000073507 1079 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
Trim27Q62158 Gm24150-201ENSMUST00000082759 104 ntBASIC3.07□□□□□ -1.92
Trim27Q62158 1700006A11Rik-201ENSMUST00000029598 2161 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
Trim27Q62158 Vmn2r72-201ENSMUST00000063425 2571 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
Trim27Q62158 Vmn1r76-203ENSMUST00000226947 8145 ntAPPRIS ALT2 BASIC3.06□□□□□ -1.92
Trim27Q62158 Zbtb37-203ENSMUST00000162226 18814 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
Trim27Q62158 Vmn1r76-202ENSMUST00000226300 8189 ntAPPRIS ALT2 BASIC3.06□□□□□ -1.92
Trim27Q62158 Gm14073-201ENSMUST00000117344 381 ntBASIC3.06□□□□□ -1.92
Trim27Q62158 Gm15399-201ENSMUST00000118055 724 ntBASIC3.06□□□□□ -1.92
Trim27Q62158 Gm8858-201ENSMUST00000118259 342 ntBASIC3.06□□□□□ -1.92
Trim27Q62158 Gm8260-201ENSMUST00000119230 353 ntBASIC3.06□□□□□ -1.92
Trim27Q62158 Gm15807-201ENSMUST00000119880 1128 ntBASIC3.06□□□□□ -1.92
Trim27Q62158 Gm14766-201ENSMUST00000121689 367 ntBASIC3.06□□□□□ -1.92
Trim27Q62158 Gm15975-201ENSMUST00000122385 1402 ntBASIC3.06□□□□□ -1.92
Trim27Q62158 Gm15008-201ENSMUST00000147429 460 ntTSL 3 BASIC3.06□□□□□ -1.92
Trim27Q62158 Gm25153-201ENSMUST00000157118 156 ntBASIC3.06□□□□□ -1.92
Trim27Q62158 Gm24922-201ENSMUST00000158511 102 ntBASIC3.06□□□□□ -1.92
Trim27Q62158 Gm17062-201ENSMUST00000166987 461 ntBASIC3.06□□□□□ -1.92
Trim27Q62158 Gm22853-201ENSMUST00000174974 131 ntBASIC3.06□□□□□ -1.92
Trim27Q62158 Gm20660-201ENSMUST00000177515 289 ntBASIC3.06□□□□□ -1.92
Trim27Q62158 Gm10193-201ENSMUST00000188288 231 ntBASIC3.06□□□□□ -1.92
Trim27Q62158 Gm28151-201ENSMUST00000189404 951 ntBASIC3.06□□□□□ -1.92
Trim27Q62158 AC154296.1-201ENSMUST00000198150 67 ntBASIC3.06□□□□□ -1.92
Trim27Q62158 Gm43669-201ENSMUST00000198229 436 ntBASIC3.06□□□□□ -1.92
Trim27Q62158 Gm44161-201ENSMUST00000203532 253 ntBASIC3.06□□□□□ -1.92
Trim27Q62158 Gm43991-201ENSMUST00000203751 274 ntBASIC3.06□□□□□ -1.92
Trim27Q62158 Olfr1463-202ENSMUST00000207246 2315 ntAPPRIS P1 TSL 2 BASIC3.06□□□□□ -1.92
Trim27Q62158 AC155927.1-201ENSMUST00000220114 1200 ntTSL 5 BASIC3.06□□□□□ -1.92
Trim27Q62158 AC126440.1-201ENSMUST00000227098 349 ntBASIC3.06□□□□□ -1.92
Trim27Q62158 AC115735.3-201ENSMUST00000227757 513 ntBASIC3.06□□□□□ -1.92
Trim27Q62158 Gm22572-201ENSMUST00000082985 105 ntBASIC3.06□□□□□ -1.92
Trim27Q62158 Gm24268-201ENSMUST00000082990 110 ntBASIC3.06□□□□□ -1.92
Trim27Q62158 Gm24045-201ENSMUST00000083113 98 ntBASIC3.06□□□□□ -1.92
Trim27Q62158 Gm37664-201ENSMUST00000194607 3813 ntBASIC3.06□□□□□ -1.92
Trim27Q62158 Olfr339-202ENSMUST00000216645 4867 ntAPPRIS P1 TSL 3 BASIC3.05□□□□□ -1.92
Trim27Q62158 Muc16-204ENSMUST00000208663 25437 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
Trim27Q62158 Nexn-211ENSMUST00000199423 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
Retrieved 100 of 76,532 protein–RNA pairs in 92.4 ms