Protein–RNA interactions for Protein: Q61164

Ctcf, Transcriptional repressor CTCF, mousemouse

Known RBP Predictions only

Length 736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtcfQ61164 Gm13085-201ENSMUST00000118356 171 ntBASIC3.36□□□□□ -1.87
CtcfQ61164 Gm9119-201ENSMUST00000118866 495 ntBASIC3.36□□□□□ -1.87
CtcfQ61164 Gm13424-201ENSMUST00000122301 354 ntBASIC3.36□□□□□ -1.87
CtcfQ61164 Gm24627-201ENSMUST00000122764 138 ntBASIC3.36□□□□□ -1.87
CtcfQ61164 Gm23326-201ENSMUST00000157419 105 ntBASIC3.36□□□□□ -1.87
CtcfQ61164 Gm24857-201ENSMUST00000158061 310 ntBASIC3.36□□□□□ -1.87
CtcfQ61164 Gm15900-201ENSMUST00000161584 342 ntBASIC3.36□□□□□ -1.87
CtcfQ61164 Gm20450-201ENSMUST00000173652 147 ntBASIC3.36□□□□□ -1.87
CtcfQ61164 Vmn2r-ps70-201ENSMUST00000174636 302 ntBASIC3.36□□□□□ -1.87
CtcfQ61164 Gm25243-201ENSMUST00000174912 207 ntBASIC3.36□□□□□ -1.87
CtcfQ61164 Obox4-ps6-201ENSMUST00000176578 724 ntBASIC3.36□□□□□ -1.87
CtcfQ61164 Gm21827-201ENSMUST00000178247 423 ntBASIC3.36□□□□□ -1.87
CtcfQ61164 Gm21978-201ENSMUST00000179696 377 ntBASIC3.36□□□□□ -1.87
CtcfQ61164 Gm27385-201ENSMUST00000184747 104 ntBASIC3.36□□□□□ -1.87
CtcfQ61164 Gm28506-201ENSMUST00000189937 150 ntBASIC3.36□□□□□ -1.87
CtcfQ61164 Ly96-202ENSMUST00000190366 429 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CtcfQ61164 Gm37313-201ENSMUST00000191673 290 ntBASIC3.36□□□□□ -1.87
CtcfQ61164 Olfr289-ps1-201ENSMUST00000192834 369 ntBASIC3.36□□□□□ -1.87
CtcfQ61164 Ighv1-40-201ENSMUST00000194231 345 ntBASIC3.36□□□□□ -1.87
CtcfQ61164 Gm44409-201ENSMUST00000198810 166 ntBASIC3.36□□□□□ -1.87
CtcfQ61164 Gm42812-201ENSMUST00000199844 337 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CtcfQ61164 Gm32381-201ENSMUST00000203192 476 ntBASIC3.36□□□□□ -1.87
CtcfQ61164 Gm44011-201ENSMUST00000203336 394 ntBASIC3.36□□□□□ -1.87
CtcfQ61164 Gm44609-201ENSMUST00000207157 460 ntBASIC3.36□□□□□ -1.87
CtcfQ61164 Gm45911-201ENSMUST00000211844 601 ntTSL 3 BASIC3.36□□□□□ -1.87
CtcfQ61164 Olfr1114-ps1-201ENSMUST00000213896 456 ntBASIC3.36□□□□□ -1.87
CtcfQ61164 AC126554.1-201ENSMUST00000222161 271 ntBASIC3.36□□□□□ -1.87
CtcfQ61164 AC239878.2-201ENSMUST00000224048 464 ntBASIC3.36□□□□□ -1.87
CtcfQ61164 AC123656.2-201ENSMUST00000226726 227 ntBASIC3.36□□□□□ -1.87
CtcfQ61164 Gm10226-201ENSMUST00000072133 255 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
CtcfQ61164 Gm22507-201ENSMUST00000082773 160 ntBASIC3.36□□□□□ -1.87
CtcfQ61164 Zfp946-204ENSMUST00000167740 1572 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
CtcfQ61164 Olfr681-205ENSMUST00000216247 4729 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
CtcfQ61164 Olfr116-202ENSMUST00000216128 4477 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
CtcfQ61164 Olfr1313-203ENSMUST00000216071 2599 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
CtcfQ61164 Olfr1471-204ENSMUST00000217249 1662 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
CtcfQ61164 Olfr124-203ENSMUST00000216478 4416 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
CtcfQ61164 Gm11228-201ENSMUST00000143796 2013 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CtcfQ61164 Olfr1104-202ENSMUST00000214857 2693 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
CtcfQ61164 Gm31592-201ENSMUST00000217529 3471 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CtcfQ61164 Olfr1172-ps1-201ENSMUST00000121530 192 ntBASIC3.35□□□□□ -1.87
CtcfQ61164 Gm11414-201ENSMUST00000121795 263 ntBASIC3.35□□□□□ -1.87
CtcfQ61164 Spink2-203ENSMUST00000121825 643 ntAPPRIS ALT2 TSL 3 BASIC3.35□□□□□ -1.87
CtcfQ61164 Gm13901-201ENSMUST00000137252 468 ntBASIC3.35□□□□□ -1.87
CtcfQ61164 Gm15961-201ENSMUST00000156090 266 ntTSL 3 BASIC3.35□□□□□ -1.87
CtcfQ61164 Gm22791-201ENSMUST00000157232 145 ntBASIC3.35□□□□□ -1.87
CtcfQ61164 Gm25283-201ENSMUST00000157272 77 ntBASIC3.35□□□□□ -1.87
CtcfQ61164 Gm25339-201ENSMUST00000157458 232 ntBASIC3.35□□□□□ -1.87
CtcfQ61164 Gm24138-201ENSMUST00000157572 114 ntBASIC3.35□□□□□ -1.87
CtcfQ61164 Gm16572-201ENSMUST00000160258 279 ntTSL 3 BASIC3.35□□□□□ -1.87
CtcfQ61164 Esp4-201ENSMUST00000178498 553 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CtcfQ61164 Trav7d-4-201ENSMUST00000178768 451 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
CtcfQ61164 Gm25284-201ENSMUST00000180345 141 ntBASIC3.35□□□□□ -1.87
CtcfQ61164 Trav7-4-201ENSMUST00000181728 451 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
CtcfQ61164 Gm27783-201ENSMUST00000183534 105 ntBASIC3.35□□□□□ -1.87
CtcfQ61164 Gm28008-201ENSMUST00000184021 186 ntBASIC3.35□□□□□ -1.87
CtcfQ61164 Mir8106-201ENSMUST00000184520 139 ntBASIC3.35□□□□□ -1.87
CtcfQ61164 Olfr277-ps1-201ENSMUST00000205749 285 ntBASIC3.35□□□□□ -1.87
CtcfQ61164 Gm16351-202ENSMUST00000209660 337 ntTSL 5 BASIC3.35□□□□□ -1.87
CtcfQ61164 Gm45387-201ENSMUST00000209792 632 ntBASIC3.35□□□□□ -1.87
CtcfQ61164 Gm7692-201ENSMUST00000213534 409 ntBASIC3.35□□□□□ -1.87
CtcfQ61164 Olfr1108-ps1-201ENSMUST00000216930 121 ntBASIC3.35□□□□□ -1.87
CtcfQ61164 AC159232.1-201ENSMUST00000222297 580 ntTSL 3 BASIC3.35□□□□□ -1.87
CtcfQ61164 Prl-203ENSMUST00000224228 888 ntAPPRIS ALT2 BASIC3.35□□□□□ -1.87
CtcfQ61164 AC161572.1-201ENSMUST00000227486 640 ntBASIC3.35□□□□□ -1.87
CtcfQ61164 Olfr769-201ENSMUST00000050915 1084 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
CtcfQ61164 Gm22979-201ENSMUST00000082609 159 ntBASIC3.35□□□□□ -1.87
CtcfQ61164 Gm23297-201ENSMUST00000083184 127 ntBASIC3.35□□□□□ -1.87
CtcfQ61164 Uty-208ENSMUST00000154004 4267 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
CtcfQ61164 Vmn1r46-203ENSMUST00000226715 10861 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
CtcfQ61164 Vmn1r46-205ENSMUST00000228349 10861 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
CtcfQ61164 Olfr896-ps1-203ENSMUST00000216276 2921 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
CtcfQ61164 Ogn-201ENSMUST00000021822 2566 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CtcfQ61164 Olfr1454-202ENSMUST00000213806 3906 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
CtcfQ61164 Zfp711-201ENSMUST00000071814 3817 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
CtcfQ61164 Gm18337-201ENSMUST00000219023 5762 ntBASIC3.34□□□□□ -1.87
CtcfQ61164 Fam81b-201ENSMUST00000208418 2760 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
CtcfQ61164 Mir693-201ENSMUST00000102187 89 ntBASIC3.34□□□□□ -1.87
CtcfQ61164 Gm24068-201ENSMUST00000104513 132 ntBASIC3.34□□□□□ -1.87
CtcfQ61164 Gm12765-201ENSMUST00000117273 615 ntBASIC3.34□□□□□ -1.87
CtcfQ61164 Gm12806-201ENSMUST00000119384 268 ntBASIC3.34□□□□□ -1.87
CtcfQ61164 Gm13541-201ENSMUST00000119519 283 ntBASIC3.34□□□□□ -1.87
CtcfQ61164 Gm11471-201ENSMUST00000121824 198 ntBASIC3.34□□□□□ -1.87
CtcfQ61164 Gm15521-201ENSMUST00000141752 835 ntTSL 2 BASIC3.34□□□□□ -1.87
CtcfQ61164 Gm16354-201ENSMUST00000155376 150 ntBASIC3.34□□□□□ -1.87
CtcfQ61164 Gm22038-201ENSMUST00000157277 242 ntBASIC3.34□□□□□ -1.87
CtcfQ61164 Gm22216-201ENSMUST00000157557 114 ntBASIC3.34□□□□□ -1.87
CtcfQ61164 Gm26088-201ENSMUST00000157896 131 ntBASIC3.34□□□□□ -1.87
CtcfQ61164 Gm25982-201ENSMUST00000157920 101 ntBASIC3.34□□□□□ -1.87
CtcfQ61164 Gm22668-201ENSMUST00000158716 260 ntBASIC3.34□□□□□ -1.87
CtcfQ61164 Vmn2r-ps18-201ENSMUST00000177972 380 ntBASIC3.34□□□□□ -1.87
CtcfQ61164 Gm7258-201ENSMUST00000179317 300 ntBASIC3.34□□□□□ -1.87
CtcfQ61164 Gm26928-201ENSMUST00000182674 572 ntBASIC3.34□□□□□ -1.87
CtcfQ61164 Ranbp2-ps7-201ENSMUST00000183924 384 ntBASIC3.34□□□□□ -1.87
CtcfQ61164 Ranbp2-ps9-201ENSMUST00000184566 382 ntBASIC3.34□□□□□ -1.87
CtcfQ61164 Gm27520-201ENSMUST00000184872 81 ntBASIC3.34□□□□□ -1.87
CtcfQ61164 Mir6363-201ENSMUST00000184880 114 ntBASIC3.34□□□□□ -1.87
CtcfQ61164 Ranbp2-ps10-201ENSMUST00000185097 385 ntBASIC3.34□□□□□ -1.87
CtcfQ61164 Gm17916-203ENSMUST00000189918 324 ntTSL 5 BASIC3.34□□□□□ -1.87
CtcfQ61164 1700109G14Rik-203ENSMUST00000190737 801 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 83.4 ms