Protein–RNA interactions for Protein: Q61069

Usf1, Upstream stimulatory factor 1, mousemouse

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usf1Q61069 Gm18453-201ENSMUST00000208000 626 ntBASIC2.22□□□□□ -2.05
Usf1Q61069 Gm45341-201ENSMUST00000210850 1104 ntTSL 5 BASIC2.22□□□□□ -2.05
Usf1Q61069 Vmn2r-ps99-201ENSMUST00000221276 1203 ntTSL 5 BASIC2.22□□□□□ -2.05
Usf1Q61069 AC166358.6-201ENSMUST00000221834 1206 ntBASIC2.22□□□□□ -2.05
Usf1Q61069 Gm35190-201ENSMUST00000222335 526 ntTSL 3 BASIC2.22□□□□□ -2.05
Usf1Q61069 Gm46389-201ENSMUST00000223199 392 ntBASIC2.22□□□□□ -2.05
Usf1Q61069 Olfr769-201ENSMUST00000050915 1084 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
Usf1Q61069 Gm10147-201ENSMUST00000075388 864 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
Usf1Q61069 Rpl30-ps8-201ENSMUST00000076166 345 ntBASIC2.22□□□□□ -2.05
Usf1Q61069 Gm25199-201ENSMUST00000083095 104 ntBASIC2.22□□□□□ -2.05
Usf1Q61069 Olfr1448-202ENSMUST00000213177 3979 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
Usf1Q61069 Ifi203-201ENSMUST00000042228 3754 ntAPPRIS ALT2 TSL 1 (best) BASIC2.22□□□□□ -2.05
Usf1Q61069 Olfr1039-203ENSMUST00000216566 4166 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.05
Usf1Q61069 Olfr681-203ENSMUST00000215517 4324 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
Usf1Q61069 Olfr298-204ENSMUST00000217110 3549 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
Usf1Q61069 Trbj1-4-201ENSMUST00000103287 51 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
Usf1Q61069 Gm23950-201ENSMUST00000104026 129 ntBASIC2.21□□□□□ -2.06
Usf1Q61069 Gm26077-201ENSMUST00000104064 123 ntBASIC2.21□□□□□ -2.06
Usf1Q61069 Gm11845-201ENSMUST00000117886 327 ntBASIC2.21□□□□□ -2.06
Usf1Q61069 Gm12941-201ENSMUST00000117934 220 ntBASIC2.21□□□□□ -2.06
Usf1Q61069 Gm5287-201ENSMUST00000120666 598 ntBASIC2.21□□□□□ -2.06
Usf1Q61069 Gm25102-201ENSMUST00000122479 112 ntBASIC2.21□□□□□ -2.06
Usf1Q61069 Gm15718-201ENSMUST00000131085 311 ntTSL 3 BASIC2.21□□□□□ -2.06
Usf1Q61069 Gm15008-201ENSMUST00000147429 460 ntTSL 3 BASIC2.21□□□□□ -2.06
Usf1Q61069 Gm16155-201ENSMUST00000155180 338 ntTSL 3 BASIC2.21□□□□□ -2.06
Usf1Q61069 Vmn1r77-201ENSMUST00000164446 921 ntAPPRIS P2 BASIC2.21□□□□□ -2.06
Usf1Q61069 Gm21746-201ENSMUST00000177612 543 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
Usf1Q61069 Gm25361-201ENSMUST00000179358 76 ntBASIC2.21□□□□□ -2.06
Usf1Q61069 Gm24464-201ENSMUST00000179697 107 ntBASIC2.21□□□□□ -2.06
Usf1Q61069 Snord116l12-201ENSMUST00000179816 94 ntBASIC2.21□□□□□ -2.06
Usf1Q61069 Snord116l14-201ENSMUST00000179875 94 ntBASIC2.21□□□□□ -2.06
Usf1Q61069 Gm27028-201ENSMUST00000182303 399 ntBASIC2.21□□□□□ -2.06
Usf1Q61069 Gm29069-201ENSMUST00000185857 675 ntTSL 3 BASIC2.21□□□□□ -2.06
Usf1Q61069 1810022K09Rik-204ENSMUST00000186870 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC2.21□□□□□ -2.06
Usf1Q61069 Scgb2b14-ps-201ENSMUST00000189424 336 ntBASIC2.21□□□□□ -2.06
Usf1Q61069 Gm28271-201ENSMUST00000191369 351 ntTSL 3 BASIC2.21□□□□□ -2.06
Usf1Q61069 Gm37757-201ENSMUST00000193072 210 ntBASIC2.21□□□□□ -2.06
Usf1Q61069 Gm20172-201ENSMUST00000193138 1551 ntBASIC2.21□□□□□ -2.06
Usf1Q61069 Gm35212-201ENSMUST00000196672 606 ntBASIC2.21□□□□□ -2.06
Usf1Q61069 Gm43587-201ENSMUST00000199590 204 ntBASIC2.21□□□□□ -2.06
Usf1Q61069 Gm43284-201ENSMUST00000200103 253 ntBASIC2.21□□□□□ -2.06
Usf1Q61069 AC156560.1-201ENSMUST00000221425 256 ntBASIC2.21□□□□□ -2.06
Usf1Q61069 AC192616.1-201ENSMUST00000221922 132 ntBASIC2.21□□□□□ -2.06
Usf1Q61069 AC124104.1-201ENSMUST00000226279 417 ntBASIC2.21□□□□□ -2.06
Usf1Q61069 AC131029.2-202ENSMUST00000228430 496 ntBASIC2.21□□□□□ -2.06
Usf1Q61069 Gm10717-201ENSMUST00000075573 684 ntTSL 5 BASIC2.21□□□□□ -2.06
Usf1Q61069 Hmgb1l-201ENSMUST00000082150 571 ntBASIC2.21□□□□□ -2.06
Usf1Q61069 Gm22247-201ENSMUST00000082476 131 ntBASIC2.21□□□□□ -2.06
Usf1Q61069 Vmn2r70-201ENSMUST00000168230 2565 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
Usf1Q61069 Gm12580-201ENSMUST00000127456 1751 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
Usf1Q61069 1700006A11Rik-201ENSMUST00000029598 2161 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
Usf1Q61069 Gm12022-201ENSMUST00000143311 1340 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
Usf1Q61069 Gm8935-201ENSMUST00000066794 2798 ntBASIC2.2□□□□□ -2.06
Usf1Q61069 Gm23472-201ENSMUST00000101806 191 ntBASIC2.2□□□□□ -2.06
Usf1Q61069 Gm25094-201ENSMUST00000103992 131 ntBASIC2.2□□□□□ -2.06
Usf1Q61069 Dppa1-202ENSMUST00000109227 551 ntAPPRIS P1 TSL 2 BASIC2.2□□□□□ -2.06
Usf1Q61069 Gm14602-201ENSMUST00000118625 340 ntBASIC2.2□□□□□ -2.06
Usf1Q61069 Gm14049-201ENSMUST00000121009 636 ntBASIC2.2□□□□□ -2.06
Usf1Q61069 Gm15167-201ENSMUST00000121997 187 ntBASIC2.2□□□□□ -2.06
Usf1Q61069 Gm26424-201ENSMUST00000122530 104 ntBASIC2.2□□□□□ -2.06
Usf1Q61069 Gm13467-201ENSMUST00000145568 281 ntTSL 5 BASIC2.2□□□□□ -2.06
Usf1Q61069 Gm24212-201ENSMUST00000158258 132 ntBASIC2.2□□□□□ -2.06
Usf1Q61069 Gm9593-201ENSMUST00000166034 469 ntBASIC2.2□□□□□ -2.06
Usf1Q61069 Vmn2r-ps84-201ENSMUST00000173377 897 ntBASIC2.2□□□□□ -2.06
Usf1Q61069 Gm24497-201ENSMUST00000177868 191 ntBASIC2.2□□□□□ -2.06
Usf1Q61069 Gm25939-201ENSMUST00000179876 191 ntBASIC2.2□□□□□ -2.06
Usf1Q61069 Gm23190-201ENSMUST00000180307 64 ntBASIC2.2□□□□□ -2.06
Usf1Q61069 Gm19257-201ENSMUST00000186121 183 ntBASIC2.2□□□□□ -2.06
Usf1Q61069 Gm29184-201ENSMUST00000190038 334 ntBASIC2.2□□□□□ -2.06
Usf1Q61069 1700019A02Rik-202ENSMUST00000190748 726 ntAPPRIS ALT2 TSL 3 BASIC2.2□□□□□ -2.06
Usf1Q61069 Gm44308-201ENSMUST00000197080 99 ntBASIC2.2□□□□□ -2.06
Usf1Q61069 AC154296.1-201ENSMUST00000198150 67 ntBASIC2.2□□□□□ -2.06
Usf1Q61069 Gm43512-201ENSMUST00000198495 176 ntBASIC2.2□□□□□ -2.06
Usf1Q61069 Mir497-201ENSMUST00000200557 84 ntBASIC2.2□□□□□ -2.06
Usf1Q61069 Olfr210-ps1-201ENSMUST00000203138 905 ntBASIC2.2□□□□□ -2.06
Usf1Q61069 Gm44472-201ENSMUST00000204922 943 ntBASIC2.2□□□□□ -2.06
Usf1Q61069 Olfr511-ps1-201ENSMUST00000207188 217 ntBASIC2.2□□□□□ -2.06
Usf1Q61069 Gm20304-201ENSMUST00000218168 444 ntBASIC2.2□□□□□ -2.06
Usf1Q61069 Tas2r107-201ENSMUST00000065781 1032 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
Usf1Q61069 Olfr305-201ENSMUST00000069236 960 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
Usf1Q61069 Olfr138-201ENSMUST00000071871 939 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
Usf1Q61069 Gm23444-201ENSMUST00000082922 191 ntBASIC2.2□□□□□ -2.06
Usf1Q61069 Gm37895-201ENSMUST00000192448 4550 ntBASIC2.2□□□□□ -2.06
Usf1Q61069 Olfr830-202ENSMUST00000212723 3105 ntAPPRIS ALT2 TSL 5 BASIC2.2□□□□□ -2.06
Usf1Q61069 Ifi203-205ENSMUST00000129829 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
Usf1Q61069 Gm5596-201ENSMUST00000207988 2421 ntBASIC2.19□□□□□ -2.06
Usf1Q61069 Gm11285-201ENSMUST00000118443 322 ntBASIC2.19□□□□□ -2.06
Usf1Q61069 Gm23885-201ENSMUST00000122682 294 ntBASIC2.19□□□□□ -2.06
Usf1Q61069 Gm9071-201ENSMUST00000165915 474 ntBASIC2.19□□□□□ -2.06
Usf1Q61069 Ifi206-202ENSMUST00000169797 429 ntTSL 5 BASIC2.19□□□□□ -2.06
Usf1Q61069 Gm25670-201ENSMUST00000178423 107 ntBASIC2.19□□□□□ -2.06
Usf1Q61069 Gm26239-201ENSMUST00000178842 107 ntBASIC2.19□□□□□ -2.06
Usf1Q61069 Gm24267-201ENSMUST00000179841 107 ntBASIC2.19□□□□□ -2.06
Usf1Q61069 Mir6353-201ENSMUST00000183596 113 ntBASIC2.19□□□□□ -2.06
Usf1Q61069 Mir6363-201ENSMUST00000184880 114 ntBASIC2.19□□□□□ -2.06
Usf1Q61069 Gm17946-201ENSMUST00000186856 538 ntBASIC2.19□□□□□ -2.06
Usf1Q61069 Gm29216-201ENSMUST00000187117 492 ntBASIC2.19□□□□□ -2.06
Usf1Q61069 Sly-201ENSMUST00000189109 797 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
Usf1Q61069 1700063A18Rik-201ENSMUST00000190901 356 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
Usf1Q61069 CT030187.1-201ENSMUST00000220605 252 ntBASIC2.19□□□□□ -2.06
Retrieved 100 of 76,532 protein–RNA pairs in 143.1 ms