Protein–RNA interactions for Protein: Q5U4C3

Scaf1, Splicing factor, arginine/serine-rich 19, mousemouse

Known RBP Predictions only

Length 1,256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf1Q5U4C3 Nlrp2-201ENSMUST00000045022 3404 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Scaf1Q5U4C3 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Scaf1Q5U4C3 Olfr1477-201ENSMUST00000214274 3913 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Scaf1Q5U4C3 Gm38031-201ENSMUST00000191819 3015 ntBASIC5.58□□□□□ -1.52
Scaf1Q5U4C3 Trav14d-2-201ENSMUST00000103597 276 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Scaf1Q5U4C3 Trav14n-2-201ENSMUST00000103623 276 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Scaf1Q5U4C3 Gm15714-201ENSMUST00000117168 250 ntBASIC5.58□□□□□ -1.52
Scaf1Q5U4C3 Hspe1-ps6-201ENSMUST00000120275 283 ntBASIC5.58□□□□□ -1.52
Scaf1Q5U4C3 Gm15263-201ENSMUST00000121556 642 ntBASIC5.58□□□□□ -1.52
Scaf1Q5U4C3 Gm13686-201ENSMUST00000122851 350 ntTSL 3 BASIC5.58□□□□□ -1.52
Scaf1Q5U4C3 Gm23713-201ENSMUST00000157353 70 ntBASIC5.58□□□□□ -1.52
Scaf1Q5U4C3 Gm22615-201ENSMUST00000158102 70 ntBASIC5.58□□□□□ -1.52
Scaf1Q5U4C3 Gm22501-201ENSMUST00000158981 127 ntBASIC5.58□□□□□ -1.52
Scaf1Q5U4C3 Gm22259-201ENSMUST00000178926 107 ntBASIC5.58□□□□□ -1.52
Scaf1Q5U4C3 Gm35702-201ENSMUST00000198653 511 ntBASIC5.58□□□□□ -1.52
Scaf1Q5U4C3 Gm19244-201ENSMUST00000204340 253 ntBASIC5.58□□□□□ -1.52
Scaf1Q5U4C3 AC122367.2-201ENSMUST00000220987 534 ntTSL 2 BASIC5.58□□□□□ -1.52
Scaf1Q5U4C3 Mir208a-201ENSMUST00000083498 83 ntBASIC5.58□□□□□ -1.52
Scaf1Q5U4C3 Defa25-201ENSMUST00000095425 279 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Scaf1Q5U4C3 Fancb-201ENSMUST00000057150 2422 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
Scaf1Q5U4C3 Ccdc178-202ENSMUST00000115837 2979 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Scaf1Q5U4C3 Gm24423-201ENSMUST00000101982 106 ntBASIC5.57□□□□□ -1.52
Scaf1Q5U4C3 Mir1193-201ENSMUST00000116761 121 ntBASIC5.57□□□□□ -1.52
Scaf1Q5U4C3 Gm14299-201ENSMUST00000117586 397 ntBASIC5.57□□□□□ -1.52
Scaf1Q5U4C3 Gm13386-201ENSMUST00000117677 124 ntBASIC5.57□□□□□ -1.52
Scaf1Q5U4C3 Vmn1r126-201ENSMUST00000168398 966 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Scaf1Q5U4C3 Gm20660-201ENSMUST00000177515 289 ntBASIC5.57□□□□□ -1.52
Scaf1Q5U4C3 Gm28825-201ENSMUST00000186233 238 ntBASIC5.57□□□□□ -1.52
Scaf1Q5U4C3 Gm44337-201ENSMUST00000196553 114 ntBASIC5.57□□□□□ -1.52
Scaf1Q5U4C3 Gm9795-201ENSMUST00000062156 693 ntBASIC5.57□□□□□ -1.52
Scaf1Q5U4C3 n-R5s54-201ENSMUST00000083837 112 ntBASIC5.57□□□□□ -1.52
Scaf1Q5U4C3 Gm26314-201ENSMUST00000083891 107 ntBASIC5.57□□□□□ -1.52
Scaf1Q5U4C3 Gm10666-201ENSMUST00000098722 966 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Scaf1Q5U4C3 Vmn1r114-201ENSMUST00000098737 966 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Scaf1Q5U4C3 Vmn1r93-201ENSMUST00000098747 966 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Scaf1Q5U4C3 AC164297.1-201ENSMUST00000224484 1561 ntBASIC5.57□□□□□ -1.52
Scaf1Q5U4C3 AL589737.1-201ENSMUST00000221163 2763 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Scaf1Q5U4C3 Btla-202ENSMUST00000102802 3251 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
Scaf1Q5U4C3 Gm17131-201ENSMUST00000164420 3846 ntBASIC5.57□□□□□ -1.52
Scaf1Q5U4C3 CT010444.1-201ENSMUST00000219963 3845 ntBASIC5.57□□□□□ -1.52
Scaf1Q5U4C3 Olfr606-203ENSMUST00000217250 2313 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Scaf1Q5U4C3 Rps6ka3-204ENSMUST00000112493 3671 ntTSL 5 BASIC5.56□□□□□ -1.52
Scaf1Q5U4C3 Gm26075-201ENSMUST00000104062 121 ntBASIC5.56□□□□□ -1.52
Scaf1Q5U4C3 Gm15561-201ENSMUST00000124326 540 ntTSL 3 BASIC5.56□□□□□ -1.52
Scaf1Q5U4C3 Gm27421-201ENSMUST00000184729 167 ntBASIC5.56□□□□□ -1.52
Scaf1Q5U4C3 Gtpbp4-ps4-201ENSMUST00000184813 258 ntBASIC5.56□□□□□ -1.52
Scaf1Q5U4C3 Gm43978-201ENSMUST00000203491 451 ntBASIC5.56□□□□□ -1.52
Scaf1Q5U4C3 Gm44543-201ENSMUST00000209136 396 ntBASIC5.56□□□□□ -1.52
Scaf1Q5U4C3 Gm5358-201ENSMUST00000212814 353 ntBASIC5.56□□□□□ -1.52
Scaf1Q5U4C3 Olfr1009-201ENSMUST00000055517 945 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Scaf1Q5U4C3 Gm25592-201ENSMUST00000082635 131 ntBASIC5.56□□□□□ -1.52
Scaf1Q5U4C3 Olfr1293-ps-203ENSMUST00000217845 3628 ntAPPRIS P5 TSL 5 BASIC5.56□□□□□ -1.52
Scaf1Q5U4C3 Gm19541-201ENSMUST00000184488 2868 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Scaf1Q5U4C3 AI314180-203ENSMUST00000107557 4946 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
Scaf1Q5U4C3 Cdh19-201ENSMUST00000094626 3914 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Scaf1Q5U4C3 Hnrnpr-207ENSMUST00000148843 21452 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Scaf1Q5U4C3 Olfr609-203ENSMUST00000216360 3295 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Scaf1Q5U4C3 Gm43824-201ENSMUST00000199042 2588 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Scaf1Q5U4C3 Trav7n-4-201ENSMUST00000103609 341 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Scaf1Q5U4C3 Gm13419-201ENSMUST00000121711 271 ntBASIC5.55□□□□□ -1.52
Scaf1Q5U4C3 4930517O19Rik-202ENSMUST00000145018 571 ntTSL 3 BASIC5.55□□□□□ -1.52
Scaf1Q5U4C3 Gm24997-201ENSMUST00000157910 105 ntBASIC5.55□□□□□ -1.52
Scaf1Q5U4C3 Gm23892-201ENSMUST00000158105 130 ntBASIC5.55□□□□□ -1.52
Scaf1Q5U4C3 Gm25447-201ENSMUST00000158997 128 ntBASIC5.55□□□□□ -1.52
Scaf1Q5U4C3 Ang-ps2-201ENSMUST00000178173 433 ntBASIC5.55□□□□□ -1.52
Scaf1Q5U4C3 Gm27545-201ENSMUST00000184755 202 ntBASIC5.55□□□□□ -1.52
Scaf1Q5U4C3 Gm19620-201ENSMUST00000195972 434 ntBASIC5.55□□□□□ -1.52
Scaf1Q5U4C3 Gm8820-201ENSMUST00000204077 571 ntBASIC5.55□□□□□ -1.52
Scaf1Q5U4C3 Gm45533-201ENSMUST00000210295 165 ntTSL 5 BASIC5.55□□□□□ -1.52
Scaf1Q5U4C3 CT030182.3-201ENSMUST00000225986 582 ntBASIC5.55□□□□□ -1.52
Scaf1Q5U4C3 n-R5s167-201ENSMUST00000083227 121 ntBASIC5.55□□□□□ -1.52
Scaf1Q5U4C3 Mir202-201ENSMUST00000083568 72 ntBASIC5.55□□□□□ -1.52
Scaf1Q5U4C3 Skint4-202ENSMUST00000106564 3997 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
Scaf1Q5U4C3 Skint4-204ENSMUST00000106566 3997 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
Scaf1Q5U4C3 Gm37655-201ENSMUST00000193968 4123 ntBASIC5.55□□□□□ -1.52
Scaf1Q5U4C3 Gm43404-201ENSMUST00000200424 2534 ntBASIC5.54□□□□□ -1.52
Scaf1Q5U4C3 Thoc1-201ENSMUST00000025137 3855 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Scaf1Q5U4C3 Zfp808-201ENSMUST00000099449 2571 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Scaf1Q5U4C3 Gm8666-201ENSMUST00000117517 292 ntBASIC5.54□□□□□ -1.52
Scaf1Q5U4C3 Gm15002-201ENSMUST00000118406 452 ntBASIC5.54□□□□□ -1.52
Scaf1Q5U4C3 Gm22521-201ENSMUST00000158272 134 ntBASIC5.54□□□□□ -1.52
Scaf1Q5U4C3 Gm16289-201ENSMUST00000162079 183 ntBASIC5.54□□□□□ -1.52
Scaf1Q5U4C3 Gm22120-201ENSMUST00000175590 70 ntBASIC5.54□□□□□ -1.52
Scaf1Q5U4C3 Gm10292-201ENSMUST00000183142 581 ntBASIC5.54□□□□□ -1.52
Scaf1Q5U4C3 Mir6336-201ENSMUST00000183581 130 ntBASIC5.54□□□□□ -1.52
Scaf1Q5U4C3 AV026068-203ENSMUST00000185946 668 ntTSL 3 BASIC5.54□□□□□ -1.52
Scaf1Q5U4C3 Gm29865-201ENSMUST00000197726 451 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Scaf1Q5U4C3 Gm44879-201ENSMUST00000207007 503 ntBASIC5.54□□□□□ -1.52
Scaf1Q5U4C3 Gm45553-201ENSMUST00000209929 507 ntBASIC5.54□□□□□ -1.52
Scaf1Q5U4C3 Gm29774-201ENSMUST00000219270 436 ntBASIC5.54□□□□□ -1.52
Scaf1Q5U4C3 Gm24152-201ENSMUST00000082764 163 ntBASIC5.54□□□□□ -1.52
Scaf1Q5U4C3 Gm43715-201ENSMUST00000196307 2715 ntBASIC5.54□□□□□ -1.52
Scaf1Q5U4C3 Tom1l1-201ENSMUST00000020849 4308 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Scaf1Q5U4C3 Vmn1r14-203ENSMUST00000227574 7394 ntAPPRIS ALT2 BASIC5.54□□□□□ -1.52
Scaf1Q5U4C3 Olfr1009-203ENSMUST00000216443 4047 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Scaf1Q5U4C3 Pde1a-205ENSMUST00000102654 4122 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Scaf1Q5U4C3 Olfr836-202ENSMUST00000212730 5045 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
Scaf1Q5U4C3 Olfr836-203ENSMUST00000215981 5046 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
Scaf1Q5U4C3 Gm32693-201ENSMUST00000196538 2402 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Scaf1Q5U4C3 Zfp738-203ENSMUST00000137496 13215 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 84.4 ms