Protein–RNA interactions for Protein: Q5SNZ0

Ccdc88a, Girdin, mousemouse

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88aQ5SNZ0 Gm26203-201ENSMUST00000082911 114 ntBASIC1.86□□□□□ -2.11
Ccdc88aQ5SNZ0 Gm7489-201ENSMUST00000100666 1222 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
Ccdc88aQ5SNZ0 Mir343-201ENSMUST00000102360 75 ntBASIC1.85□□□□□ -2.11
Ccdc88aQ5SNZ0 Gm25213-201ENSMUST00000102388 113 ntBASIC1.85□□□□□ -2.11
Ccdc88aQ5SNZ0 Gm12386-201ENSMUST00000117380 688 ntBASIC1.85□□□□□ -2.11
Ccdc88aQ5SNZ0 Gm13085-201ENSMUST00000118356 171 ntBASIC1.85□□□□□ -2.11
Ccdc88aQ5SNZ0 Gm14669-201ENSMUST00000118841 250 ntBASIC1.85□□□□□ -2.11
Ccdc88aQ5SNZ0 Gm2768-201ENSMUST00000121062 250 ntBASIC1.85□□□□□ -2.11
Ccdc88aQ5SNZ0 Prl2c5-204ENSMUST00000151144 623 ntTSL 2 BASIC1.85□□□□□ -2.11
Ccdc88aQ5SNZ0 Gm25621-201ENSMUST00000157223 114 ntBASIC1.85□□□□□ -2.11
Ccdc88aQ5SNZ0 Gm23122-201ENSMUST00000157645 103 ntBASIC1.85□□□□□ -2.11
Ccdc88aQ5SNZ0 Gm26181-201ENSMUST00000157687 106 ntBASIC1.85□□□□□ -2.11
Ccdc88aQ5SNZ0 Gm5168-202ENSMUST00000168002 636 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
Ccdc88aQ5SNZ0 Gm8151-201ENSMUST00000184817 871 ntBASIC1.85□□□□□ -2.11
Ccdc88aQ5SNZ0 Gm27656-201ENSMUST00000185055 80 ntBASIC1.85□□□□□ -2.11
Ccdc88aQ5SNZ0 B230110G15Rik-201ENSMUST00000190868 772 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
Ccdc88aQ5SNZ0 Gm37578-201ENSMUST00000192256 1177 ntBASIC1.85□□□□□ -2.11
Ccdc88aQ5SNZ0 Gm43960-201ENSMUST00000204249 5020 ntBASIC1.85□□□□□ -2.11
Ccdc88aQ5SNZ0 Olfr196-202ENSMUST00000205471 1711 ntAPPRIS P1 TSL 3 BASIC1.85□□□□□ -2.11
Ccdc88aQ5SNZ0 Gm18488-201ENSMUST00000215082 364 ntBASIC1.85□□□□□ -2.11
Ccdc88aQ5SNZ0 AC120540.1-201ENSMUST00000221879 324 ntBASIC1.85□□□□□ -2.11
Ccdc88aQ5SNZ0 AC154603.1-201ENSMUST00000224355 313 ntBASIC1.85□□□□□ -2.11
Ccdc88aQ5SNZ0 AC124569.1-201ENSMUST00000225932 101 ntBASIC1.85□□□□□ -2.11
Ccdc88aQ5SNZ0 AL590614.1-201ENSMUST00000226037 268 ntBASIC1.85□□□□□ -2.11
Ccdc88aQ5SNZ0 Olfr619-201ENSMUST00000098196 1124 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
Ccdc88aQ5SNZ0 Gm37061-201ENSMUST00000195066 3243 ntBASIC1.85□□□□□ -2.11
Ccdc88aQ5SNZ0 Olfr948-202ENSMUST00000216132 4164 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
Ccdc88aQ5SNZ0 Gm7429-201ENSMUST00000118664 348 ntBASIC1.84□□□□□ -2.11
Ccdc88aQ5SNZ0 Gm12327-201ENSMUST00000121729 1168 ntBASIC1.84□□□□□ -2.11
Ccdc88aQ5SNZ0 Gm13096-201ENSMUST00000127752 251 ntTSL 5 BASIC1.84□□□□□ -2.11
Ccdc88aQ5SNZ0 Gm13194-201ENSMUST00000142299 311 ntBASIC1.84□□□□□ -2.11
Ccdc88aQ5SNZ0 Gm11168-203ENSMUST00000178348 672 ntAPPRIS ALT2 TSL 5 BASIC1.84□□□□□ -2.11
Ccdc88aQ5SNZ0 Mir6338-201ENSMUST00000183389 109 ntBASIC1.84□□□□□ -2.11
Ccdc88aQ5SNZ0 Gm29460-201ENSMUST00000188607 714 ntBASIC1.84□□□□□ -2.11
Ccdc88aQ5SNZ0 Gm37576-201ENSMUST00000194228 372 ntBASIC1.84□□□□□ -2.11
Ccdc88aQ5SNZ0 Gm44392-201ENSMUST00000196758 115 ntBASIC1.84□□□□□ -2.11
Ccdc88aQ5SNZ0 Igkv13-56-1-201ENSMUST00000198481 209 ntBASIC1.84□□□□□ -2.11
Ccdc88aQ5SNZ0 Gm44693-201ENSMUST00000208141 460 ntTSL 3 BASIC1.84□□□□□ -2.11
Ccdc88aQ5SNZ0 Gm45696-201ENSMUST00000212088 985 ntBASIC1.84□□□□□ -2.11
Ccdc88aQ5SNZ0 Olfr339-201ENSMUST00000071437 930 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
Ccdc88aQ5SNZ0 Mir344-201ENSMUST00000083634 95 ntBASIC1.84□□□□□ -2.11
Ccdc88aQ5SNZ0 Gm10192-201ENSMUST00000086672 327 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
Ccdc88aQ5SNZ0 Gm5152-202ENSMUST00000088625 417 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
Ccdc88aQ5SNZ0 Gm7869-201ENSMUST00000121457 1322 ntBASIC1.84□□□□□ -2.12
Ccdc88aQ5SNZ0 Olfr1313-203ENSMUST00000216071 2599 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.12
Ccdc88aQ5SNZ0 Gm15896-201ENSMUST00000118045 440 ntBASIC1.84□□□□□ -2.12
Ccdc88aQ5SNZ0 Gtpbp4-ps5-201ENSMUST00000184969 289 ntBASIC1.84□□□□□ -2.12
Ccdc88aQ5SNZ0 Gm34302-201ENSMUST00000192926 243 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.12
Ccdc88aQ5SNZ0 Olfr278-ps1-201ENSMUST00000205676 238 ntBASIC1.84□□□□□ -2.12
Ccdc88aQ5SNZ0 4930431P19Rik-201ENSMUST00000207570 451 ntBASIC1.84□□□□□ -2.12
Ccdc88aQ5SNZ0 AC126672.1-201ENSMUST00000217096 396 ntBASIC1.84□□□□□ -2.12
Ccdc88aQ5SNZ0 AC123830.1-201ENSMUST00000217156 609 ntTSL 3 BASIC1.84□□□□□ -2.12
Ccdc88aQ5SNZ0 Defb37-201ENSMUST00000066282 352 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
Ccdc88aQ5SNZ0 Gm23850-201ENSMUST00000083830 169 ntBASIC1.84□□□□□ -2.12
Ccdc88aQ5SNZ0 Knl1-203ENSMUST00000099542 6525 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
Ccdc88aQ5SNZ0 Gm15130-201ENSMUST00000132464 663 ntAPPRIS P1 TSL 3 BASIC1.83□□□□□ -2.12
Ccdc88aQ5SNZ0 Gm17119-201ENSMUST00000163943 280 ntBASIC1.83□□□□□ -2.12
Ccdc88aQ5SNZ0 Gm26195-201ENSMUST00000175035 101 ntBASIC1.83□□□□□ -2.12
Ccdc88aQ5SNZ0 Gm17946-201ENSMUST00000186856 538 ntBASIC1.83□□□□□ -2.12
Ccdc88aQ5SNZ0 1700019A02Rik-202ENSMUST00000190748 726 ntAPPRIS ALT2 TSL 3 BASIC1.83□□□□□ -2.12
Ccdc88aQ5SNZ0 Gm42924-201ENSMUST00000197261 185 ntBASIC1.83□□□□□ -2.12
Ccdc88aQ5SNZ0 Gm32877-201ENSMUST00000197419 709 ntTSL 5 BASIC1.83□□□□□ -2.12
Ccdc88aQ5SNZ0 Gm18982-201ENSMUST00000198118 529 ntBASIC1.83□□□□□ -2.12
Ccdc88aQ5SNZ0 Gm18242-201ENSMUST00000218455 542 ntBASIC1.83□□□□□ -2.12
Ccdc88aQ5SNZ0 Gm24151-201ENSMUST00000082758 141 ntBASIC1.83□□□□□ -2.12
Ccdc88aQ5SNZ0 Gm22507-201ENSMUST00000082773 160 ntBASIC1.83□□□□□ -2.12
Ccdc88aQ5SNZ0 A930027P06Rik-201ENSMUST00000221298 2975 ntBASIC1.83□□□□□ -2.12
Ccdc88aQ5SNZ0 Ighv3-1-201ENSMUST00000103478 350 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
Ccdc88aQ5SNZ0 Gm11077-201ENSMUST00000111844 84 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
Ccdc88aQ5SNZ0 Gm13457-201ENSMUST00000117885 267 ntBASIC1.82□□□□□ -2.12
Ccdc88aQ5SNZ0 Gm12550-201ENSMUST00000118478 329 ntBASIC1.82□□□□□ -2.12
Ccdc88aQ5SNZ0 Gm13510-201ENSMUST00000118659 429 ntBASIC1.82□□□□□ -2.12
Ccdc88aQ5SNZ0 Gm6587-201ENSMUST00000120219 613 ntBASIC1.82□□□□□ -2.12
Ccdc88aQ5SNZ0 Gm23387-201ENSMUST00000158586 107 ntBASIC1.82□□□□□ -2.12
Ccdc88aQ5SNZ0 Gm25365-201ENSMUST00000158852 121 ntBASIC1.82□□□□□ -2.12
Ccdc88aQ5SNZ0 Gm23190-201ENSMUST00000180307 64 ntBASIC1.82□□□□□ -2.12
Ccdc88aQ5SNZ0 Mir6411-201ENSMUST00000183556 108 ntBASIC1.82□□□□□ -2.12
Ccdc88aQ5SNZ0 Gm27493-201ENSMUST00000184128 78 ntBASIC1.82□□□□□ -2.12
Ccdc88aQ5SNZ0 AC153522.1-201ENSMUST00000220047 1090 ntBASIC1.82□□□□□ -2.12
Ccdc88aQ5SNZ0 Gm46993-201ENSMUST00000220708 259 ntBASIC1.82□□□□□ -2.12
Ccdc88aQ5SNZ0 Olfr807-203ENSMUST00000217106 1788 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
Ccdc88aQ5SNZ0 AL645643.1-201ENSMUST00000222438 3897 ntBASIC1.82□□□□□ -2.12
Ccdc88aQ5SNZ0 Olfr1148-202ENSMUST00000215230 3095 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
Ccdc88aQ5SNZ0 Gm15176-201ENSMUST00000117734 135 ntBASIC1.82□□□□□ -2.12
Ccdc88aQ5SNZ0 Gm11998-201ENSMUST00000146304 972 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
Ccdc88aQ5SNZ0 Mir6541-201ENSMUST00000183649 110 ntBASIC1.82□□□□□ -2.12
Ccdc88aQ5SNZ0 Ranbp2-ps8-201ENSMUST00000183723 345 ntBASIC1.82□□□□□ -2.12
Ccdc88aQ5SNZ0 Gm29192-201ENSMUST00000190942 377 ntBASIC1.82□□□□□ -2.12
Ccdc88aQ5SNZ0 Igkv15-102-201ENSMUST00000197885 287 ntBASIC1.82□□□□□ -2.12
Ccdc88aQ5SNZ0 Gm43493-201ENSMUST00000199837 202 ntBASIC1.82□□□□□ -2.12
Ccdc88aQ5SNZ0 Vmn1r85-202ENSMUST00000209822 1251 ntAPPRIS P1 TSL 2 BASIC1.82□□□□□ -2.12
Ccdc88aQ5SNZ0 Gm18188-201ENSMUST00000219386 478 ntBASIC1.82□□□□□ -2.12
Ccdc88aQ5SNZ0 AC155927.1-201ENSMUST00000220114 1200 ntTSL 5 BASIC1.82□□□□□ -2.12
Ccdc88aQ5SNZ0 AC122393.3-201ENSMUST00000226343 1059 ntBASIC1.82□□□□□ -2.12
Ccdc88aQ5SNZ0 AC165284.1-201ENSMUST00000228614 458 ntBASIC1.82□□□□□ -2.12
Ccdc88aQ5SNZ0 Gm25126-201ENSMUST00000083343 102 ntBASIC1.82□□□□□ -2.12
Ccdc88aQ5SNZ0 Mir350-201ENSMUST00000083639 99 ntBASIC1.82□□□□□ -2.12
Ccdc88aQ5SNZ0 Gm22866-201ENSMUST00000083947 177 ntBASIC1.82□□□□□ -2.12
Ccdc88aQ5SNZ0 AC117226.1-201ENSMUST00000221635 3737 ntBASIC1.82□□□□□ -2.12
Ccdc88aQ5SNZ0 Olfr1487-203ENSMUST00000209005 2061 ntTSL 3 BASIC1.81□□□□□ -2.12
Retrieved 100 of 76,532 protein–RNA pairs in 96.4 ms