Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Gm22730-201ENSMUST00000158085 171 ntBASIC0.81□□□□□ -2.28
Trav3-1Q5R1I8 Gm24229-201ENSMUST00000158830 118 ntBASIC0.81□□□□□ -2.28
Trav3-1Q5R1I8 Gm26195-201ENSMUST00000175035 101 ntBASIC0.81□□□□□ -2.28
Trav3-1Q5R1I8 Prl3c1-203ENSMUST00000178072 579 ntAPPRIS ALT2 TSL 5 BASIC0.81□□□□□ -2.28
Trav3-1Q5R1I8 Gm27007-201ENSMUST00000183264 279 ntTSL 3 BASIC0.81□□□□□ -2.28
Trav3-1Q5R1I8 Ranbp2-ps8-201ENSMUST00000183723 345 ntBASIC0.81□□□□□ -2.28
Trav3-1Q5R1I8 Mir6911-201ENSMUST00000184241 69 ntBASIC0.81□□□□□ -2.28
Trav3-1Q5R1I8 Gm37175-201ENSMUST00000192023 587 ntTSL 5 BASIC0.81□□□□□ -2.28
Trav3-1Q5R1I8 Gm32877-201ENSMUST00000197419 709 ntTSL 5 BASIC0.81□□□□□ -2.28
Trav3-1Q5R1I8 Gm29865-201ENSMUST00000197726 451 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
Trav3-1Q5R1I8 AC172027.1-201ENSMUST00000217659 337 ntBASIC0.81□□□□□ -2.28
Trav3-1Q5R1I8 AC158803.1-201ENSMUST00000219495 316 ntBASIC0.81□□□□□ -2.28
Trav3-1Q5R1I8 AC154828.2-201ENSMUST00000220908 1070 ntBASIC0.81□□□□□ -2.28
Trav3-1Q5R1I8 1700015C15Rik-201ENSMUST00000221465 374 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
Trav3-1Q5R1I8 CT009733.1-201ENSMUST00000225322 425 ntBASIC0.81□□□□□ -2.28
Trav3-1Q5R1I8 Sval1-201ENSMUST00000031898 615 ntAPPRIS P1 TSL 1 (best) BASIC0.81□□□□□ -2.28
Trav3-1Q5R1I8 Tas2r139-201ENSMUST00000057686 960 ntAPPRIS P1 BASIC0.81□□□□□ -2.28
Trav3-1Q5R1I8 Gm22443-201ENSMUST00000082890 107 ntBASIC0.81□□□□□ -2.28
Trav3-1Q5R1I8 Mir29c-201ENSMUST00000083614 88 ntBASIC0.81□□□□□ -2.28
Trav3-1Q5R1I8 Gm17229-201ENSMUST00000097355 1138 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
Trav3-1Q5R1I8 Olfr1218-202ENSMUST00000213609 3760 ntAPPRIS P1 TSL 5 BASIC0.81□□□□□ -2.28
Trav3-1Q5R1I8 Gm25407-201ENSMUST00000104102 134 ntBASIC0.8□□□□□ -2.28
Trav3-1Q5R1I8 Gm12598-201ENSMUST00000117333 830 ntBASIC0.8□□□□□ -2.28
Trav3-1Q5R1I8 Cyp4b1-ps1-201ENSMUST00000118753 315 ntBASIC0.8□□□□□ -2.28
Trav3-1Q5R1I8 Gm14731-201ENSMUST00000119216 376 ntBASIC0.8□□□□□ -2.28
Trav3-1Q5R1I8 Gm12317-201ENSMUST00000122307 319 ntBASIC0.8□□□□□ -2.28
Trav3-1Q5R1I8 Gm13793-201ENSMUST00000124214 438 ntTSL 2 BASIC0.8□□□□□ -2.28
Trav3-1Q5R1I8 Gm24915-201ENSMUST00000157288 78 ntBASIC0.8□□□□□ -2.28
Trav3-1Q5R1I8 Gm25666-201ENSMUST00000157702 107 ntBASIC0.8□□□□□ -2.28
Trav3-1Q5R1I8 Gm22425-201ENSMUST00000158532 138 ntBASIC0.8□□□□□ -2.28
Trav3-1Q5R1I8 Gm22527-201ENSMUST00000158816 106 ntBASIC0.8□□□□□ -2.28
Trav3-1Q5R1I8 Gm24177-201ENSMUST00000158927 131 ntBASIC0.8□□□□□ -2.28
Trav3-1Q5R1I8 Gm6395-201ENSMUST00000167639 691 ntBASIC0.8□□□□□ -2.28
Trav3-1Q5R1I8 Vmn2r-ps79-201ENSMUST00000174256 377 ntBASIC0.8□□□□□ -2.28
Trav3-1Q5R1I8 Gm23402-201ENSMUST00000178130 107 ntBASIC0.8□□□□□ -2.28
Trav3-1Q5R1I8 Gm19891-201ENSMUST00000189771 303 ntBASIC0.8□□□□□ -2.28
Trav3-1Q5R1I8 4930440C22Rik-202ENSMUST00000190754 512 ntTSL 3 BASIC0.8□□□□□ -2.28
Trav3-1Q5R1I8 Igkv8-31-201ENSMUST00000200040 372 ntBASIC0.8□□□□□ -2.28
Trav3-1Q5R1I8 Olfr1439-ps1-201ENSMUST00000207089 824 ntBASIC0.8□□□□□ -2.28
Trav3-1Q5R1I8 4930567K20Rik-203ENSMUST00000220108 646 ntTSL 5 BASIC0.8□□□□□ -2.28
Trav3-1Q5R1I8 AC167140.1-201ENSMUST00000224710 403 ntBASIC0.8□□□□□ -2.28
Trav3-1Q5R1I8 Gm7984-201ENSMUST00000060640 538 ntBASIC0.8□□□□□ -2.28
Trav3-1Q5R1I8 Vmn1r231-201ENSMUST00000061278 936 ntAPPRIS P1 BASIC0.8□□□□□ -2.28
Trav3-1Q5R1I8 Gm21994-201ENSMUST00000063463 990 ntAPPRIS P1 TSL 5 BASIC0.8□□□□□ -2.28
Trav3-1Q5R1I8 Gm14914-201ENSMUST00000117576 2031 ntBASIC0.8□□□□□ -2.28
Trav3-1Q5R1I8 Gm44240-201ENSMUST00000204015 2654 ntBASIC0.8□□□□□ -2.28
Trav3-1Q5R1I8 Gm24431-201ENSMUST00000104073 66 ntBASIC0.79□□□□□ -2.28
Trav3-1Q5R1I8 Gm10974-201ENSMUST00000107486 126 ntAPPRIS P1 TSL 5 BASIC0.79□□□□□ -2.28
Trav3-1Q5R1I8 Gm12941-201ENSMUST00000117934 220 ntBASIC0.79□□□□□ -2.28
Trav3-1Q5R1I8 Gm15211-201ENSMUST00000118932 528 ntBASIC0.79□□□□□ -2.28
Trav3-1Q5R1I8 Gm13794-201ENSMUST00000148637 468 ntTSL 3 BASIC0.79□□□□□ -2.28
Trav3-1Q5R1I8 Gm23170-201ENSMUST00000157158 106 ntBASIC0.79□□□□□ -2.28
Trav3-1Q5R1I8 Gm24846-201ENSMUST00000158033 108 ntBASIC0.79□□□□□ -2.28
Trav3-1Q5R1I8 Gm23205-201ENSMUST00000158671 103 ntBASIC0.79□□□□□ -2.28
Trav3-1Q5R1I8 Obox3-ps7-201ENSMUST00000176465 410 ntBASIC0.79□□□□□ -2.28
Trav3-1Q5R1I8 Gm28825-201ENSMUST00000186233 238 ntBASIC0.79□□□□□ -2.28
Trav3-1Q5R1I8 Gm38274-201ENSMUST00000195689 148 ntBASIC0.79□□□□□ -2.28
Trav3-1Q5R1I8 Obox4-ps25-201ENSMUST00000199090 210 ntBASIC0.79□□□□□ -2.28
Trav3-1Q5R1I8 Gm31752-201ENSMUST00000199456 856 ntTSL 2 BASIC0.79□□□□□ -2.28
Trav3-1Q5R1I8 Gm44050-201ENSMUST00000204263 527 ntBASIC0.79□□□□□ -2.28
Trav3-1Q5R1I8 CT010449.1-201ENSMUST00000220624 153 ntBASIC0.79□□□□□ -2.28
Trav3-1Q5R1I8 AC192088.2-201ENSMUST00000227590 411 ntBASIC0.79□□□□□ -2.28
Trav3-1Q5R1I8 Gm25126-201ENSMUST00000083343 102 ntBASIC0.79□□□□□ -2.28
Trav3-1Q5R1I8 Gm26327-201ENSMUST00000093724 111 ntBASIC0.79□□□□□ -2.28
Trav3-1Q5R1I8 Zfp119a-201ENSMUST00000079642 2018 ntAPPRIS P1 TSL 1 (best) BASIC0.79□□□□□ -2.28
Trav3-1Q5R1I8 Zfp846-201ENSMUST00000060063 1626 ntAPPRIS P1 TSL 5 BASIC0.78□□□□□ -2.28
Trav3-1Q5R1I8 Trav20-201ENSMUST00000142754 347 ntBASIC0.78□□□□□ -2.28
Trav3-1Q5R1I8 Gm16129-201ENSMUST00000152628 486 ntBASIC0.78□□□□□ -2.28
Trav3-1Q5R1I8 Gm13853-201ENSMUST00000155496 557 ntTSL 3 BASIC0.78□□□□□ -2.28
Trav3-1Q5R1I8 Gm22891-201ENSMUST00000158641 164 ntBASIC0.78□□□□□ -2.28
Trav3-1Q5R1I8 Mir3057-201ENSMUST00000175040 91 ntBASIC0.78□□□□□ -2.28
Trav3-1Q5R1I8 Gm24816-201ENSMUST00000175311 151 ntBASIC0.78□□□□□ -2.28
Trav3-1Q5R1I8 Gm24020-201ENSMUST00000180156 108 ntBASIC0.78□□□□□ -2.28
Trav3-1Q5R1I8 Gm16399-201ENSMUST00000181423 219 ntBASIC0.78□□□□□ -2.28
Trav3-1Q5R1I8 Vmn1r-ps5-201ENSMUST00000202963 931 ntBASIC0.78□□□□□ -2.28
Trav3-1Q5R1I8 Gm45366-201ENSMUST00000209828 384 ntBASIC0.78□□□□□ -2.28
Trav3-1Q5R1I8 Olfr861-ps1-201ENSMUST00000212783 928 ntBASIC0.78□□□□□ -2.28
Trav3-1Q5R1I8 Olfr989-ps1-201ENSMUST00000214405 912 ntBASIC0.78□□□□□ -2.28
Trav3-1Q5R1I8 Gm10298-201ENSMUST00000074801 265 ntBASIC0.78□□□□□ -2.28
Trav3-1Q5R1I8 Gm23246-201ENSMUST00000083371 67 ntBASIC0.78□□□□□ -2.28
Trav3-1Q5R1I8 Defb43-201ENSMUST00000100491 408 ntAPPRIS P1 TSL 1 (best) BASIC0.77□□□□□ -2.29
Trav3-1Q5R1I8 Ighv3-6-201ENSMUST00000103481 342 ntAPPRIS ALT2 BASIC0.77□□□□□ -2.29
Trav3-1Q5R1I8 Gm2348-201ENSMUST00000108782 300 ntBASIC0.77□□□□□ -2.29
Trav3-1Q5R1I8 Rhox11-ps1-201ENSMUST00000121945 387 ntBASIC0.77□□□□□ -2.29
Trav3-1Q5R1I8 Gm13661-201ENSMUST00000154297 318 ntTSL 3 BASIC0.77□□□□□ -2.29
Trav3-1Q5R1I8 Gm25863-201ENSMUST00000158249 329 ntBASIC0.77□□□□□ -2.29
Trav3-1Q5R1I8 Gm16311-201ENSMUST00000161939 702 ntTSL 3 BASIC0.77□□□□□ -2.29
Trav3-1Q5R1I8 Mir7031-201ENSMUST00000183860 65 ntBASIC0.77□□□□□ -2.29
Trav3-1Q5R1I8 Gm27399-201ENSMUST00000184250 78 ntBASIC0.77□□□□□ -2.29
Trav3-1Q5R1I8 AC122225.1-201ENSMUST00000215641 369 ntBASIC0.77□□□□□ -2.29
Trav3-1Q5R1I8 AC111044.1-201ENSMUST00000220206 555 ntTSL 5 BASIC0.77□□□□□ -2.29
Trav3-1Q5R1I8 Gm19441-201ENSMUST00000221545 330 ntBASIC0.77□□□□□ -2.29
Trav3-1Q5R1I8 Ear14-201ENSMUST00000049559 468 ntBASIC0.77□□□□□ -2.29
Trav3-1Q5R1I8 Mir346-201ENSMUST00000083547 98 ntBASIC0.77□□□□□ -2.29
Trav3-1Q5R1I8 Gm25411-201ENSMUST00000083760 151 ntBASIC0.77□□□□□ -2.29
Trav3-1Q5R1I8 Ppp4r3c-ps-201ENSMUST00000151416 2445 ntBASIC0.77□□□□□ -2.29
Trav3-1Q5R1I8 Vmn1r75-207ENSMUST00000228646 4466 ntAPPRIS ALT2 BASIC0.77□□□□□ -2.29
Trav3-1Q5R1I8 Gm43032-201ENSMUST00000197967 3123 ntBASIC0.76□□□□□ -2.29
Trav3-1Q5R1I8 Lrrc19-202ENSMUST00000107101 2820 ntAPPRIS P1 TSL 1 (best) BASIC0.76□□□□□ -2.29
Trav3-1Q5R1I8 Olfr138-203ENSMUST00000173841 1865 ntAPPRIS P1 TSL 2 BASIC0.76□□□□□ -2.29
Retrieved 100 of 76,532 protein–RNA pairs in 66.9 ms