Protein–RNA interactions for Protein: Q5R1E6

Trav6-3, T cell receptor alpha variable 6-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-3Q5R1E6 Vmn1r178-203ENSMUST00000226489 2644 ntBASIC1.82□□□□□ -2.12
Trav6-3Q5R1E6 Gm15975-201ENSMUST00000122385 1402 ntBASIC1.82□□□□□ -2.12
Trav6-3Q5R1E6 Olfr830-202ENSMUST00000212723 3105 ntAPPRIS ALT2 TSL 5 BASIC1.82□□□□□ -2.12
Trav6-3Q5R1E6 Olfr847-202ENSMUST00000216839 2385 ntAPPRIS P1 TSL 3 BASIC1.81□□□□□ -2.12
Trav6-3Q5R1E6 AC153526.2-201ENSMUST00000218206 2031 ntBASIC1.81□□□□□ -2.12
Trav6-3Q5R1E6 Olfr166-203ENSMUST00000216465 4371 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
Trav6-3Q5R1E6 Olfr1181-203ENSMUST00000213190 3934 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
Trav6-3Q5R1E6 Gm26473-201ENSMUST00000116763 127 ntBASIC1.81□□□□□ -2.12
Trav6-3Q5R1E6 Gm14602-201ENSMUST00000118625 340 ntBASIC1.81□□□□□ -2.12
Trav6-3Q5R1E6 Gm14785-201ENSMUST00000120185 539 ntBASIC1.81□□□□□ -2.12
Trav6-3Q5R1E6 Gm27755-201ENSMUST00000184623 132 ntBASIC1.81□□□□□ -2.12
Trav6-3Q5R1E6 Gm20058-201ENSMUST00000186939 284 ntBASIC1.81□□□□□ -2.12
Trav6-3Q5R1E6 Gm29185-201ENSMUST00000190578 516 ntTSL 5 BASIC1.81□□□□□ -2.12
Trav6-3Q5R1E6 Gm43556-201ENSMUST00000196186 681 ntBASIC1.81□□□□□ -2.12
Trav6-3Q5R1E6 Gm42604-201ENSMUST00000200077 801 ntTSL 3 BASIC1.81□□□□□ -2.12
Trav6-3Q5R1E6 Gm44223-201ENSMUST00000204854 114 ntBASIC1.81□□□□□ -2.12
Trav6-3Q5R1E6 AC117688.1-201ENSMUST00000213142 832 ntTSL 5 BASIC1.81□□□□□ -2.12
Trav6-3Q5R1E6 AC120553.1-201ENSMUST00000227313 260 ntBASIC1.81□□□□□ -2.12
Trav6-3Q5R1E6 Olfr786-201ENSMUST00000076508 939 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
Trav6-3Q5R1E6 1700006A11Rik-201ENSMUST00000029598 2161 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
Trav6-3Q5R1E6 Gm20172-201ENSMUST00000193138 1551 ntBASIC1.81□□□□□ -2.12
Trav6-3Q5R1E6 Gm26384-201ENSMUST00000102183 110 ntBASIC1.8□□□□□ -2.12
Trav6-3Q5R1E6 n-R5s26-201ENSMUST00000104601 122 ntBASIC1.8□□□□□ -2.12
Trav6-3Q5R1E6 Gm17132-201ENSMUST00000109542 1158 ntBASIC1.8□□□□□ -2.12
Trav6-3Q5R1E6 Gm26474-201ENSMUST00000116762 122 ntBASIC1.8□□□□□ -2.12
Trav6-3Q5R1E6 Gm14833-201ENSMUST00000118345 1027 ntBASIC1.8□□□□□ -2.12
Trav6-3Q5R1E6 Gm14887-201ENSMUST00000119522 663 ntBASIC1.8□□□□□ -2.12
Trav6-3Q5R1E6 Gm15807-201ENSMUST00000119880 1128 ntBASIC1.8□□□□□ -2.12
Trav6-3Q5R1E6 Gm14841-201ENSMUST00000121067 758 ntBASIC1.8□□□□□ -2.12
Trav6-3Q5R1E6 Gm11849-201ENSMUST00000121293 261 ntBASIC1.8□□□□□ -2.12
Trav6-3Q5R1E6 Gm15077-201ENSMUST00000122344 362 ntBASIC1.8□□□□□ -2.12
Trav6-3Q5R1E6 Gm26256-201ENSMUST00000122499 186 ntBASIC1.8□□□□□ -2.12
Trav6-3Q5R1E6 Gm15205-201ENSMUST00000129329 632 ntTSL 5 BASIC1.8□□□□□ -2.12
Trav6-3Q5R1E6 Gm10721-201ENSMUST00000143083 669 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
Trav6-3Q5R1E6 Gm16155-201ENSMUST00000155180 338 ntTSL 3 BASIC1.8□□□□□ -2.12
Trav6-3Q5R1E6 Gm23981-201ENSMUST00000157136 106 ntBASIC1.8□□□□□ -2.12
Trav6-3Q5R1E6 Gm24922-201ENSMUST00000158511 102 ntBASIC1.8□□□□□ -2.12
Trav6-3Q5R1E6 Gm25476-201ENSMUST00000175125 185 ntBASIC1.8□□□□□ -2.12
Trav6-3Q5R1E6 Gm21746-201ENSMUST00000177612 543 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
Trav6-3Q5R1E6 Gm22633-201ENSMUST00000179834 107 ntBASIC1.8□□□□□ -2.12
Trav6-3Q5R1E6 Gm28399-201ENSMUST00000186221 318 ntBASIC1.8□□□□□ -2.12
Trav6-3Q5R1E6 Gm28595-201ENSMUST00000186223 437 ntTSL 5 BASIC1.8□□□□□ -2.12
Trav6-3Q5R1E6 Gm17946-201ENSMUST00000186856 538 ntBASIC1.8□□□□□ -2.12
Trav6-3Q5R1E6 Gm28572-201ENSMUST00000187444 318 ntBASIC1.8□□□□□ -2.12
Trav6-3Q5R1E6 Gm29516-201ENSMUST00000190402 468 ntBASIC1.8□□□□□ -2.12
Trav6-3Q5R1E6 Gm43355-201ENSMUST00000196541 346 ntBASIC1.8□□□□□ -2.12
Trav6-3Q5R1E6 Gm42825-201ENSMUST00000198883 723 ntTSL 2 BASIC1.8□□□□□ -2.12
Trav6-3Q5R1E6 Igkv11-118-201ENSMUST00000199448 346 ntBASIC1.8□□□□□ -2.12
Trav6-3Q5R1E6 Gm45445-201ENSMUST00000209586 232 ntBASIC1.8□□□□□ -2.12
Trav6-3Q5R1E6 AC153541.1-201ENSMUST00000213786 294 ntBASIC1.8□□□□□ -2.12
Trav6-3Q5R1E6 AC158598.1-201ENSMUST00000214349 3847 ntBASIC1.8□□□□□ -2.12
Trav6-3Q5R1E6 AC159475.1-201ENSMUST00000216752 411 ntTSL 5 BASIC1.8□□□□□ -2.12
Trav6-3Q5R1E6 AC069561.2-201ENSMUST00000217596 420 ntBASIC1.8□□□□□ -2.12
Trav6-3Q5R1E6 Cycs-ps3-201ENSMUST00000223240 321 ntBASIC1.8□□□□□ -2.12
Trav6-3Q5R1E6 AC126440.1-201ENSMUST00000227098 349 ntBASIC1.8□□□□□ -2.12
Trav6-3Q5R1E6 Zfp953-201ENSMUST00000081582 4677 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
Trav6-3Q5R1E6 Gm26228-201ENSMUST00000082512 107 ntBASIC1.8□□□□□ -2.12
Trav6-3Q5R1E6 Gm25080-201ENSMUST00000082526 107 ntBASIC1.8□□□□□ -2.12
Trav6-3Q5R1E6 Gm22572-201ENSMUST00000082985 105 ntBASIC1.8□□□□□ -2.12
Trav6-3Q5R1E6 Gm25518-201ENSMUST00000083864 107 ntBASIC1.8□□□□□ -2.12
Trav6-3Q5R1E6 Gm10718-201ENSMUST00000099046 681 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
Trav6-3Q5R1E6 Olfr1313-203ENSMUST00000216071 2599 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
Trav6-3Q5R1E6 Zfp988-201ENSMUST00000148762 2800 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
Trav6-3Q5R1E6 Usp9y-201ENSMUST00000091188 8094 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
Trav6-3Q5R1E6 Gm22779-201ENSMUST00000104085 107 ntBASIC1.79□□□□□ -2.12
Trav6-3Q5R1E6 Igkv13-87-201ENSMUST00000114214 286 ntBASIC1.79□□□□□ -2.12
Trav6-3Q5R1E6 Gm14558-201ENSMUST00000117458 381 ntBASIC1.79□□□□□ -2.12
Trav6-3Q5R1E6 Gm12697-201ENSMUST00000118008 667 ntBASIC1.79□□□□□ -2.12
Trav6-3Q5R1E6 Dnaic1-202ENSMUST00000119127 500 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
Trav6-3Q5R1E6 Gm15106-201ENSMUST00000119691 821 ntBASIC1.79□□□□□ -2.12
Trav6-3Q5R1E6 Gm12155-201ENSMUST00000121267 160 ntBASIC1.79□□□□□ -2.12
Trav6-3Q5R1E6 Sult2a-ps4-201ENSMUST00000121421 386 ntBASIC1.79□□□□□ -2.12
Trav6-3Q5R1E6 Gm14366-201ENSMUST00000121970 730 ntBASIC1.79□□□□□ -2.12
Trav6-3Q5R1E6 Gm14211-201ENSMUST00000152250 408 ntTSL 3 BASIC1.79□□□□□ -2.12
Trav6-3Q5R1E6 Gm25624-201ENSMUST00000157222 275 ntBASIC1.79□□□□□ -2.12
Trav6-3Q5R1E6 Gm26099-201ENSMUST00000157248 109 ntBASIC1.79□□□□□ -2.12
Trav6-3Q5R1E6 Gm22563-201ENSMUST00000157333 269 ntBASIC1.79□□□□□ -2.12
Trav6-3Q5R1E6 Gm25243-201ENSMUST00000174912 207 ntBASIC1.79□□□□□ -2.12
Trav6-3Q5R1E6 Gm20794-201ENSMUST00000177626 628 ntBASIC1.79□□□□□ -2.12
Trav6-3Q5R1E6 Gm21776-201ENSMUST00000177676 1083 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
Trav6-3Q5R1E6 Gm21744-201ENSMUST00000178403 662 ntBASIC1.79□□□□□ -2.12
Trav6-3Q5R1E6 Gm21171-201ENSMUST00000180048 673 ntBASIC1.79□□□□□ -2.12
Trav6-3Q5R1E6 Gm24518-201ENSMUST00000180275 94 ntBASIC1.79□□□□□ -2.12
Trav6-3Q5R1E6 Obox4-ps2-201ENSMUST00000185088 442 ntBASIC1.79□□□□□ -2.12
Trav6-3Q5R1E6 Gm29413-201ENSMUST00000186019 880 ntBASIC1.79□□□□□ -2.12
Trav6-3Q5R1E6 Gm28870-201ENSMUST00000187033 880 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
Trav6-3Q5R1E6 Gm28700-201ENSMUST00000187614 579 ntBASIC1.79□□□□□ -2.12
Trav6-3Q5R1E6 Gm10193-201ENSMUST00000188288 231 ntBASIC1.79□□□□□ -2.12
Trav6-3Q5R1E6 Gm29639-201ENSMUST00000188375 580 ntBASIC1.79□□□□□ -2.12
Trav6-3Q5R1E6 Gm28843-201ENSMUST00000189198 678 ntBASIC1.79□□□□□ -2.12
Trav6-3Q5R1E6 Gm29546-201ENSMUST00000191171 678 ntBASIC1.79□□□□□ -2.12
Trav6-3Q5R1E6 Gm18964-201ENSMUST00000193013 563 ntBASIC1.79□□□□□ -2.12
Trav6-3Q5R1E6 Gm42647-201ENSMUST00000195939 459 ntBASIC1.79□□□□□ -2.12
Trav6-3Q5R1E6 Gm43402-201ENSMUST00000197159 159 ntBASIC1.79□□□□□ -2.12
Trav6-3Q5R1E6 Gm44393-201ENSMUST00000197418 138 ntBASIC1.79□□□□□ -2.12
Trav6-3Q5R1E6 Gm43284-201ENSMUST00000200103 253 ntBASIC1.79□□□□□ -2.12
Trav6-3Q5R1E6 Gm42530-201ENSMUST00000202683 550 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
Trav6-3Q5R1E6 Gm44083-201ENSMUST00000203114 337 ntBASIC1.79□□□□□ -2.12
Trav6-3Q5R1E6 AC123803.1-201ENSMUST00000216093 189 ntBASIC1.79□□□□□ -2.12
Trav6-3Q5R1E6 AC164597.2-201ENSMUST00000226738 603 ntBASIC1.79□□□□□ -2.12
Retrieved 100 of 76,532 protein–RNA pairs in 92.1 ms